EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01936 alignment
(18 sequences with 558 bp)


Q9RU18_DEIRA/7-167 CGCCCCCGCGTCGGGGTTTTTATCGATACCCAGAACCTGTACCACTCGGCCCGCGACCTGCTCGAGCGCACCGTCAACTTCGAGACGATTCTGCAAGTCGCCACCGAGGGGCGCGAA---------CTCGTCCACGCCATCAGCTACACCGTGGAGCGCGAGGGCGAGGCG.................................---ACGTCGCGG---CCCTTCATCTACAAGCTCTCCACGCTCGGCTTCAAGGTCCGGCGCATGaacctgACGCTGCACCATGTCACCGACGGC......GGCAAACCGATTTATGAAGGTAACTGGGACATGGGCATCGTGGCCGACATGTTCCGGCTGATG------GACCACCTCGATGTCATCGTGCTCGGCAGTGGCGACGGGGATTTTACCGACATCGTCGAGGTCTTGCAGGAGCGT---GGCAAGCGGGTGGAGGTCATCGCCTTC---...------CGCGAGCACACCGCGCAGAAACTCATCGACGCCGCCGACCGCTTTACCCACCTGCCCGACATCGAAGAA
Q9HS40_HALN1/7-161 GCCCAGCGGGTCGCTGTACTCGCTGACTCACAGAACCTCTATCACTCCGCACAGAGCGTTTACTCTCAGAACATCGACTACGCTGCCCTGCTGGACAAAGGCGTTCAGGACCGCGAA---------CTCACGCGCGCCATCGCGTACGTGATCCGCGCCCAATCCGAGGAC.................................------GAAGAC---CGGTTTTTCGACGCGCTCCGGGACATCGGCTTCGAGACGAAGATCAAG......GCCATCAAGACGTTCGGCGACGGC......---------TCGAAGAAAGCCGACTGGGACGTCGGCATGAGCCTCGATGCGGTGTCGCTGGCC------GATCACATCGACACCATTGTGCTTTGCACCGGCGACGGTGACTTCTCCCGGCTGTGTCGCCACCTCCGCCACGAG---GGCGTTCGCGTCGAAGTGATGGCCTTC---...------GAAGAGTCGGCGGCGACGGAACTCGTCGACGCCGCGGACTCGTTTGTCGATCTCAGCGAGCGCACCGAG
Q9HX65_PSEAE/9-164 GCGAAGAAGATCGCTGTCTTCGCCGATGTGCAGAACCTCTACTACACCGTGCGCCAGGCCTACGGCTGCCATCTCAACTACGCCGCCCTGTGGGCAGACATCGCTCGCGGCGGGAGC---------ATCGTCGAGGCCTATGCCTACGCCATCGACCGCGGCGACCCG---.................................------CGTCAGCAGCAGTTCCAGCAGATTCTGCGCAACCTCGGTTTCACGGTGAAGCTGAAG......CCCTACATCCAGCGTGCCGACGGC......---------TCGGCCAAGGGTGACTGGGATGTCGGCATCACCATCGACGTACTGGATGCCGCG------CCACGGGTGGACGAAGTGGTGCTGCTGTCCGGTGACGGCGACTTCGATCTGCTGCTGGAGAAGGTCATCCGCGCCCACGGCGTCGTGGCTACGGCCTACGGGGTG---...------CCTGGCCTGACCGCCAACGCGCTGATCCGAGCGGCGTCGCGCTACGTGCCGATCGAGGGCGGACTGCTG
Q9KR36_VIBCH/1-156 ATGGAAAAAATTGCCATTTTGGTGGATGTACAAAACGTGTATTACACCTGCCGCGAGCAATATGGCCGGCACTTTGATTACAATCAGTTTTGGTCGCAAGTGACGCAAAATCGCACG---------GTAGTGAAAGCCAATGCCTATGCGATTGCCAGTAAAGATCCGCAG.................................------CAGAGGCAA---TTTCATCATATTTTACGAGGGATTGGCTTTGAGGTGATGCTAAAA......CCTTTTATCCAGCGCAGTGATGGT......---------AGCGCGAAAGGGGATTGGGATGTCGGGATTGCCCTTGATGGCTATGAATTAGCT------CAGGAGGTAGACACCGTGGTGCTCGTTTCTGGGGATGGTGATTTTGAACCTTTGGTGACCAGAATTGCGCAACGCTTTCAGGTTAAGGTGGAAGTGTATGGCGTG---...------CCGAAACTGACCGCGCAACATTTAATCGATGTCGCCAGTCAATTTCACCCGATTGAGCATCGTCTATTA
Q9AF14_VIBPA/6-161 AAAGAAAAAATCGCCATTCTCGTTGACGTTCAAAACGTTTATTACACTTGTCGCGAAGCGTATCGCAGTAACTTTGACTACAACCAGTTTTGGTATGTCGCGACACAAGAAAAGGAA---------GTAGTAAGCGCAAAAGCTTATGCCATTGCCAGTAACGATCCG---.................................---AAGCAACGCCAG---TTTCATCACATTCTAAGAGGTGTGGGATTTGAGGTGATGTTGAAG......CCTTACATTCAGCGTCGAGATGGC......---------AGCGCCAAAGGGGATTGGGATGTCGGTATCACGCTCGATGCGATTGAGATTGCG------CCTGATGTTGACCGCGTGATTTTGGTTTCTGGTGATGGCGACTTCAGTTTGCTGGTGGAACGTATTCAGCAGCGCTACAACAAGAAGGTCACCGTCTATGGTGTA---...------CCAAGGTTAACCTCGCAAACCTTGATTGATTGTGCTGATAATTTCGTCGCGATTGATGATGATTTCTTG
O66744_AQUAE/23-178 AGGAGGAGGGCCGCGATATTCGTGGACGGCACGAACCTCTACTTTATCCAGAAGAACTTCCTCAACGCCAAGATAGACATCGTGAAGTTCGTCAATTACTTTAAGCAGTTTTACGAC---------ATTTACAACACCTTCTTTTACCTCGCCTACAAGGAAGAGGACGAA.................................---AAGCAGGAGAGG---TTTTTTAAACTCCTTGCCTTCAGCGGTATAACCGTAGTGAAAAAA......CCCGTAAAACAACTCAAGGACGGA......---------AGCCTGAAGGGAGACGTTGACGTGGACATAGCTATAGACATGCTCCTCACGAAG------GACAATTACGACACGGCTATCCTCTGTTCAGGGGACAGCGACTTTGAAAGGCTCGTTTACGTACTCAGAAACTTC---GGAAAAGAGGTTATATGCGTCTCCACA---...------AAGGAAAGCTCTTCCATAGAACTTGTGAATGCCTGCGACAGGTACATAGACCTTAAAGAAATACTACCC
Q9A814_CAUCR/6-170 ACCGACCGGCTTGCCCTGTTCATTGACGGGGCCAACCTCTATTCCGCCGCCAAGGCGCTG---GGCTTTGACATCGACTACCGCAAGCTGCTCGACGAGTTCAAAAAGCGCGGGGTT---------CTTATTCGGGCCTATTACTACACCGCGATCGCCGAGAACGACGAC.................................TATTCGCCGATCCGGCCGCTGGTCGACTGGCTGGACTATAACGGCTTCACCCTGGTCACGAAG......CCGGCGCGCGAGTTCACCGACAGC...cagGGCCGCAAGCGCTGGCGCGGCGACATGGACATCGAGATCGCCGTCGACATGCTGCAGATCGCC------GAGACCGCCGATCATCTCGTCTTGTTCTCGGGCGACGGCGACTTCCGCGCCCTGGTCGAGGCCGTCCAGCGCAAG---GGCCGCCGGGTCACGGTCGTCTCGACGATGaagAGCCAGCCGCCGATGACCAGCGACGACCTGCGCCGTCAGGCCGACAACTTCGTCGACCTCGCCGACCTTGGAAAC
Q985B4_RHILO/5-169 CGTGAAAAAATCGCCCTGTTCATCGACGGTGCCAATCTCTACGCCACCTCGCGGGCGCTC---GGCTTCGACATCGACTATCGCAAGCTCTTGTCGAGTTTCCAGAAGCGCGGCTAT---------CTCTTGCGCGCCTATTATTACACGGCGCTGGTCGAGGATCAGGAA.................................TATTCCTCGATCCGCCCGCTGATCGACTGGCTCGACTACAACGGCTTCAAGGTGGTGACCAAG......CCCGCCAAGGAATTCACCGACTCG...accGGCCGCCGCAAGATCAAGGGCAATATGGACATCGAACTCACCGTCGATGCGCTGGAGCTCGCC------GATGTCGTCGACCACTATGTCATTTTCTCCGGCGACGGCGATTTCCGCACGCTGGTCGAAGCGCTGCAACGGCGC---GGCCGCAAGGTGTCGATCGTCTCGACCATGgccTCGCAACCGCCGATGATCTCGGACGATCTGCGCCGCCAGGCCGACCACTTCATCGACCTGACGACGCTGAAGAAC
Q46579_DEIRA/1-160 ATGGAACGTATTGCACTCTTTATTGACGGCGCGAATGTCTATGCCGCGGCCAAACGGCTC---GGCTGGAACTTCGACCACCGCAAGATTCTCGAACATTTTGCGGGGCTCGGCGCT---------CTGTATAACGCCTTTTACTACACCGCCGTGCCCTGGCCGGTGGAC.................................GACAAACAAAAGCGC---TTCGTGGACGCCCTGACCTACATGGGCTACACGGTCCGCACCCGC......CCGCTGCGCGAGAACACCGACGAG...aacGGCGACACCTCGCGCCGCGCCAGCCTCGACATCGAACTGGTGACCGACCTGCTCACCACCGAG------AGCCGCTACGACGTGGCGGTGCTGCTCTCCGGCGACGGCGACTTCGAGCGCCCGGTGGAGGTGCTGCGCGCCCGG---GGCAAGAAAGTCATCGTGGCGAGCATT---...------CCCGAGATGACGAGCGCCGAACTGCGCAACGCCGCCGACGAGTACGTGGACCTCGCCAGCATCCGTGAG
P74640_SYNY3/11-171 AGGGATCGTTTGTCTATCTTTGTGGATGGGAATAATATGTTTTATGCACAACAGAAA---AATGGGTGGTTTTTTGACCCCAGAAGGGTATTATCTTTCTTCACTGAAGATCCATCTGTAAAA---CTCGTCAATGCATTTTGGTACACTGGTTTAAAAGATACCCAAGAT.................................---------CAAAGGGGTTTCCGTGATGCCCTTATAAGTTTAGGTTACACCGTCAGAACTAAA......ATTCTTAAGGAATATTATGACGACatttccGGCAAATATTCCCAAAAAGCTAATCTAGATATTGAAATTGTGGTGGACATGTTTAACACCGTA------GATCAATATGATCGGGTGGTTTTGTTCAGTGGTGACGGCGATTTTGAACGGGCGATCGAACTCTTAAGATCAAAA---AGTACCCACATAACTGTAGTTTCCACC---...------GAAGGCATGATTGCTAGGGAATTACGAAATGCCACCGATCGTTATATTGATCTCAATGACATCAGGCCA
Q55730_SYNY3/20-174 CGGGGGCGGGTAGCCATTTTCATCGATGGTTCCAATCTTTTTTACGCCGCATTACAGTTG---GGCATTGAAATTGATTACACCAAGCTATTGCACTGTTTAACGGGCGGCTCCCGC---------CTATTGCGGGCTTTTTTCTACACCGGAGTAGACCGTAGTAACGAA.................................---AAACAACAG---GGATTTTTACTTTGGATGCGCCGCAATGGTTACCGAGTCATTGCCAAA......GACTTAGTGCAATTACCAGACGGT......---------TCTAAAAAGGCTAACTTAGACGTGGAAATTGCCGTGGACTTGATGTCCCTGGTG------GGTTCCTATGACACCGCAGTGGTGGTCAGTGGCGATGGGGATTTGGCCTATGCGGCCGATGCGGTCAGTTATCGG---GGGGCGCGCATTGAAGTGGTGAGTCTC---...------CGTTCCATGACCAGCGACAGTTTAATTAATGTGTCCGACCGTTACGTGGATCTTGACAGTATTAAGGAG
O66579_AQUAE/2-171 AACGAGAGGTTAATGATATTCATCGACGGTTCTAATCTGTTTCACGGAATACGGTACTTG---AACATAAAGGTGGATTATTCAAAACTCGTGGAGTTCTTGAGGGAGGGGCGCTAC---------CTCGTTCGCGCTTACTTTTACACCGCCGTTCCTCAGGAAAAGGACatcaagaagggaacgcccgagtgggacagtcttCAGAGACAAAAGAGG---TTCCTTGACGAACTTTCCTTTATGGGCATAAAAGTGAAGACAGCT......CACTTGAGGAAACTCCCGAGCGGT......------GAGTACCTGGAAAAGGAAGTTGACATAATGCTTGCCACGGATATGCTCTCCCTTGCTTACAGAAACGCTTACGATACGGCTGTTCTCGTTAGCGGGGATAGCGACTTTATACACACCGTGGAAGCGGTGCAGAGTCTG---GGAAAGAGGGTGGAAAACGCAACATTC---...------AAGAAAACGAGTTCCTACAACCTGAGAAAGGTGTGCGACAGGTTCATACTTCTGGACGACCATCTTGAC
O57790_PYRHO/28-166 GGAAAAAGGATTGCTCTCCTCGTTGATGGTCCCAATATACTTAGGAAAGAGCTTGGAGTT------CATCTGGAGGATATAGTGGAGGCCCTAAGTAGCCTTGGTAACATCAGGGTTGCAAAGGTAATCCTCAAT------CAATACGCT---------------------.................................---------CCTCAAAGTCTAATTGAAGCGGTGTCAAATCAAGGTTTTGAACCAGTAATT---......------------------------......------------GTTGCCGGAGAAATAGGGGTAAAGCTTGCAGTAGAAGCCATGAGAGAGGTTTACAATCCGAACATAGACATAATAGCTCTAGCAACAAGAAACACGGAATTCGTGCCAATAATACTCAAGGCAAAGGAGAAA---GGAAAAGAAACCGCAATAATAGGGGTA---...------GAGCCTGGTTTTAGTTCGGCATTAAAGCATGCAGCAGATTATGTGATAGTACTAGAGTCGAGAGGTGAG
O57789_PYRHO/21-159 GAAAAAACGATAGGCTTGATAATTGATGGACCGAACATTCTTAGAAAGGAATTTGGGATA------AAGCTTGAGGACATAAAGAAGGCCTTAGAAAAAATTGGAAAGATCAGAGTAGCTAAAGTTGTTTTAAAC------CAGTACGCC---------------------.................................---------CCTCAAGGATTGATAGAGGCCGTTGTTAATCAAGGTTTTGAACCCATA------......------------------------......---------ATCGTTGCAGGAGACACCGATGTTAGAGTGGCCATAGAGGCTATGGAACTAATTTACAATACAGACGTTGACGTTATAGCACTTGCAACCAGGGATGCAGATTTCCTACCCTTAATAAGTGAAGCCAAGAGAAAG---GGAAAAGAAACTGTGGTAATTGGGGTA---...------GAACCGGGCTTTTCAGTGGCCCTACAGAATGCTGCAGATTATATAATAAAGATGGAGAAGAAAAAAGAA
Y482_METJA/69-207 GAGCATAGAATTGCATTGTTAATTGATGGACCAAACATGCTTAGAAAAGAATTTAACATT------GATTTAGATAAAATTAGAGAGGTTTTAAGTGAATTTGGCGATATTGTTATTGGCAGGGTTTATTTGAAC------CAATATGCATCAGATAAA------------.................................------------------TTAATAGAGGCCGTTATAAACCAAGGTTTTGAACCAAAGATA---......------------------------......------------TCTGCTGGAGATGTGGATGTTGAAATGGCTGTAGATGCCACTGAGCTCGTGTTTAATCCAAATATTGACACCATTGCCTATGTAACAAGAGATGCTGACTTTCTTCCAGCAATTAGAAAGGCAAAAGAAAGG---GGAAAAAAGGTTATAGTTATTGGAGCT---...------GAGCCTGGTTTTTCAACGGCTTTACAGAATATTGCTGATTATGTAATTAAAATTGGAGAGGAATTCCAA
O27935_METTH/23-161 GAAAAAAATATAGGCCTCCTTGTTGATGGCCCGAACATGCTCAGAAAGGAATTCAGCCTT---AACCTGGATCTT---GTAAGGCAGATAATGTCAGAATATGGTAATATGCGTGTTGGAAAGGTCCTTCTCAAC------CAGTACGCATCAGATAAA------------.................................------------------CTCATAGAGGCAATTGTTAACCAGGGCTTTACACCAATTGTT---......------------------------......------------GTGGCATGGGACACCGATGTTTACATGGCTGTTGAGGCCATGGAACTGATATACAACCCTAATATTGATATAATAGCCCTCATGACACGTGACGCTGATTTTCTACCAATAATAAACAAGGCAAAGGAGAAC---GGGAAGGACACCATCGTGATAGGTGCA---...------GAACCAGGCTTCAGTGCGGCACTCCAGAATTCCGCAGACCACGCCATAATACTCAAACCAGAGAACAGC
O27136_METTH/17-155 AAAAAGAGTCTTGGGCTCCTTGTTGATGGTCCAAACATGCTCAGAAAGGAATTCTGT------TCAGATCTTGAATTTGTAAAGAACCTCCTCTTTGACAGGGGAAACCTCAAGGTAGGAAAGGTGCTGCTGAAC------CAGTACGCCTCAGATAAG------------.................................------------------CTGATAGAGGCCGTTGTGAACCAGGGCTTCTCACCCATGATA---......------------------------......------------GTTGCGGGTGATGTGGATGTTCAGCTCGCAGTTGAAGCCTTTGAACTCATACACAACCCCAACATCGATGTGGTTGCAATTATGACAAGGAACGCTGACTTCCTCCCCCTCATAAACATAGCCAAGGAGAAC---GGGAAGGAGACCCTGGTCATAGGTGCA---...------GAGCCAGGTTTCAGTATAGCACTCCAGAACTCAGCAGACGACTCAATAATCCTTGGAAGCGAAGGGGTG
O29200_ARCFU/25-163 CGCAGGAAAGTTGGCGTACTTGTGGATGGGCCAAACATGCTCAGGAAGGAGTTTAATATT------AATTTGAAAGAGATTAGAGAAATTCTTTCTGAGTATGGCGATATCAAGATTGCCAAAGTTTTTCTGAAT------CAATATGCCACTGAA---------------.................................---------------AAGCTTGTTGAAGCAATAGAAAATCAGGGGTTCGAGCCTATAGTG---......------------------------......------------ACTTCCGGAGACGTGGATGTGAGGATGGCGGTCGAAGCCATGGAGCTCATATACAACGACTCGATTGATGCAGTTGCCCTCGTTACGAGAGACGCCGACTTCAAGGCTGTTTTGATGAAGGCAATGGAGATG---GGAAAGGAGACGATAATCATCGGTGCC---...------GAGCCCGGCTTCTCAACGGCCCTCAAAAACTCTGCTGATATTGCCATTGTTCTTAATGAGGATGAGGAA