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Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF01924 - HypD)
Hydrogenase formation hypA family
(
Pfam
reference: accession no.
PF01924
)
(
Interpro
reference: accession no.
IPR002780
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
12 sequences @ 380 aa
(ave. pairwise identity: 0.46)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 5.42)
nucleotides
(available for above)
11 sequences @ 1140 bp
(ave. pairwise identity: 0.51)
New Hampshire format
(total tree length: 4.34)
amino acids, restricted set
(corresp. to available nt seqs)
11 sequences @ 380 aa
(ave. pairwise identity: 0.46)
New Hampshire format
(total tree length: 5.02)