EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01900 alignment
(11 sequences with 456 bp)


RP14_HUMAN/23-123 GTCTGCCTAGAATTTCAAGAT------------------------------------------..............................---TGTGGAGTTGGACTGAATGCTGCACAGTTCAAACAGCTGCTTATTTCGGCTGTGAAGGACCTGTTTGGGGAGGTTGATGCCGCCTTACCT---------TTGGACATCCTAACC---...---...---TATGAAGAGAAGACCTTGTCAGCCATCTTGAGAATATGTAGCAGTGGTCTTGTCAAATTGTGGAGCTCTTTGACCCTGTTAGGATCCTATAAAGGCAAAAAA------------TGTGCT........................---...TTCCGGGTGATTCAGGTTTCTCCATTTCTTCTTGCATTAtctGGTAATAGTAGGGAACTAGTATTGGAT------------
RNP2_SULSO/44-142 AGGTATATAGTATTTTATGTAATCTCT------------------------------------..............................------GAATATAAAGTAAAAGGCGATGATTTAGAGAGAGTTATTCGCAACTCCTTGAAGGACTTATTAGGTAGTGTGTGGCTTAACATTGCAAACCCCAAAGTT---GTTACCTAT---...---...------CGAGAAGATACTCAAGAAGGAATTATATCCACTAATAGGGTAGGTTACAAGGCAGTTTTAGCTAGTTTACCCTTTGCTAAGGAAATTAATAATAATAAA------------ATTCTA........................---...ATAGTTCCTAGAAGGACAACC------------------...GGTAGCTTAAAAAAGGCGAAAAAA---CTAATCGGATTA
POP5_YEAST/7-132 AGATATATCCTTTTTGAAATTATATTCCCACCTACAGACACCAACGTTGAGGAATCTGTGTCGaaagcagacatcttgctttcgcatcacagaGCATCGCCTGCGGATGTGTCCATAAAGTCGATACTCCAAGAGATACGACGCTCGCTGTCGTTGAATCTGGGCGACTATGGGTCTGCAAAATGTAACTCTCTCTTGCAGTTGAAATAC---...---...---TTTTCAAATAAGACGTCTACGGGGATAATCCGATGCCATCGAGAGGATTGCGACCTTGTTATCATGGCATTGATGTTGATGTCGAAAATTGGCGACGTCGAT---------GGACTGATC........................---...GTGAACCCCGTCAAGGTAAGT------------------...GGGACCATCAAGAAAATAGAGCAG---TTTGCTATGAGA
RNP2_SCHPO/7-122 CGATATTTACTTTTTGAAGTATTATATCCTGAAGCAAAAGAGTTTTTTGACTATCCTACTATC..............................CCTTCTGATAGTTCTATAACTACGTCTAGTCTTTCTAAAATAATTAGAACCATGGTTGCAGAAAATTTCGGTGATGTTGGTATTGGAAAGGTTGCATCTAGTCTAACTGTAAAATAT---...---...---TTTTCACCTAATACATCTACTGGCATTCTGCGGGTCTCAAGACAGCATTTTCGTTTGGCATGGGCCGCATTAGTTTTAATAAGGGAATTATATGGCAAGCCT------------GTAATA........................---...ATTCGCGTGGTTCGTGTATCT------------------...GGTACAATAAAAAAGGCAGAATTAGCTGCCATTGAACGA
RNP2_METJA/17-114 AGATATATTGCATTTAAAATATTATAC------------------------------------..............................------GATGAGGAGTTAAAAGAGGGAGAGGTTGTTAATTTAATTAGAAAAGCTGTTTTAGAATATTATGGCTCTTGGGGAACATCCAAGGCAAATCCATGGCTT---GTTTATTAT---...---...------GAT------TTTCCTTATGGTATTTTGAGATGTCAAAGGGATAATGTTGATTATGTAAAAGCCTCTTTAATTTTGATTAGGGAATTTAAAGAAAAGCCA------------GTAAAT........................---...ATTATCTGCTTAGGAGTTTCC------------------...GGGACAATAAGAAAGGCAAAAATAAAATTTTTAGGAATA
RNP2_PYRHO/17-116 AGATACATTGCATTTGAAATAATTAGT------------------------------------..............................------GATGGTGATTTTACAAAAGATGAAGTTAAAGAGCTCATATGGAAAAGCTCTTTAGAGGTACTTGGTGAAACAGGTACTGCTATCGTTAAACCTTGGCTT---ATAAAATTT---...---...------GATCCTAACACGAAGACTGGTATAGTTAGATGTGATCGAGAGTACGTTGAGTACCTTAGATTTGCGTTGATGCTAGTTTCCGAGTTCAATGGTAAAAGA------------CTAATT........................---...ATAAGGACGCTTGGAGTCTCT------------------...GGGACAATAAAAAGACTAAAAAGAAAATTCTTAGCAAAG
RNP2_METTH/13-118 AGGTACATAGCCTTTGAGGTGATCAGT------------------------------------..............................------GAGAGGGAGCTCTCAAGGGAGGAACTTGTCTCCCTCATATGGGATAGCTGCCTCAAGCTGCATGGGGAGTGTGAAACATCAAATTTCCGTTTATGGCTC---ATGAAGCTCTGGaggTTCgatTTTCCAGACGCCGTCAGGGTGAGGGGCATACTCCAGTGCCAGAGGGGCTATGAGAGGAGGGTCATGATGGCCCTCACATGCGCCCACCACCACAGCGGGGTGAGG------------GTCGCC........................---...ATCCACATCCTCGGCCTTTCA------------------...GGGACGATACGCTCGGCAACACAAAAGTTTATTAAACCT
Q9Y2Q6_HUMAN/7-116 AGGTACCTGCTCTGCGAACTGGTGTCTGACGACCCCCGC------------------------..............................---TGCCGCCTAAGCCTCGATGACCGAGTTCTGAGCAGCCTCGTACGGGACACGATCGCCAGGGTGCACGGAACTTTCGGC---GCACCCTGCTCCATCGGCTTCGCGGTTCGATAT---...---...---CTCAATGCCTATACTGGAATAGTGCTACTTCGATGCAGAAAAGAATTCTATCAGCTTGTGTGGTCAGCTCTTCCCTTCATCACATACTTGGAGAACAAAGGACACCGTTACCCATGCTTT........................---...TTCAACACATTACATGTGGGA------------------...GGTACAATAAGAACATGTCAGAAGTTCCTAATTCAGTAC
Q9VVE0_DROME/7-113 AGGTATATAGCGGTGCAGATTGTGCCCTACACGCCAACA------------------------..............................---CAATCTCTGCGACTCAACGACCACAGCCTGACCAAGATCCTGCTTCAGAATGTGGAGAAGTATTACGGAGTCTATGGCCTCGCCGTGATCGAGCAGGGATTTCGAGTGAAATAC---...---...---ATCAACGATCGCACGAAAATGGCAATCATACGCTGTCTCCATCGAGGCCAACGCTTCGTGTCCAGCGTATTGCCATTGATTACTTTGATCGGAGATGTACGG------------GCCAAG........................---...TTTAGGACGCTGTACATTGGT------------------...GCCACCATCATCCAATGCAACAAGTTCATAGTCAAGCAC
LIPB_ARATH/7-129 AGATACATGTTAATGGAAGTTTTTCTGGATCCGGACAAGGATCTTCTCGGAGAAGGAACA---..............................------CCGATCATTCTTACACAATTCAATCTCTCGAAAGCAATCAAAGACAGTATCCTCGTCAATTTCGGCGAGTGTGGTCTAGGTTCGTCTCTCGGTTCCTTCCAAGTGAAATAT---...---...---GTGAATCCAATCACGAAGCTATGCATTGTAAGATCATCAAGAGAAGAACACAGACAAGTTTGGTTAGCAATCACATTGGTCAAAAGCATCGGAAACTGTCCG------------GAAATGagatcccctagaaccttggaggttTGGaagCTAGGCACTGTCAACTATTTG------------------...AAATCCCTTAAACTGCAGGAGAAATTAGTTTCAGAGAGA
Q9XWY3_CAEEL/7-110 CGCTACTACGTGATTCGAATGCTCACAAATGATGGCTCA------------------------..............................------CCACCGACACCAAGAAAATCGTCGATTTTTCAAGAACTCATGAAACTCACGTCGGAAATGTTTGGAGATTTTGGATATTCTATTTTGAAAATGAGCCTTTCGGTTCGAGTT---...---...---CTCGACGAA------GACGTGATCGTACTCCGAGTGGCCGAAGGCGGAAATAAATATTTTGGAGCAATTCTTCCATGTGTTCATAAAATTGATAAGCAGCCA------------ATGGTC........................---...TTGCAGACTATTTTCATTGGC------------------...AGAAGCATGAGATCTTGCGAGAAACGACTCATCAAAAGC