EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01896 alignment
(9 sequences with 1071 bp)


PRIS_METTH/7-298 CCGGCAACACCC---......---CTTGAGAGGAAGAGGTACTACCGTGAGGAGTGGAATGTCAGGGACCTTCCT------------------...GACTTCATAGCTGATAACCTCCATATGAGGGAATTCGGGTTCGAC------------CACAATGGCAGGGGACCCAGTGACAGGTACAGGGTCTTCAGGGATGAGAGGAGTCTGGCAAGGTTCATGAGGGTCCGTTACCCATTCGCAGCATACTCCTCGGTGGCGTTCTACAGGGAACCC------------TGGAAGAGGAAGGGGTGGCAGCGG---------------------TCCGAACTCATATTCGATGTTGATGCCAAGGACCTCCCT---GTGAGATCATGTGAG------------TGTGACGGTGTATGCCCCACATGCCTTGATGAGGCAAGG---GAACTGGTCCTCATGATGGTTGACACCCTGAAGGGGGACCTGGGCCTGGGC------GACATCCATGTCATATACTCAGGGAGG---GGCTACCATGTTAGGGTCCTC------GACCCCGAGGTCATGGAGCTCGGCTCGGAGGTGAGGGCTGAGATACTGCGGTACACCGCAGGTGCAAGGGAGCCGCGGAGGAAGTTTACCGATGGGGTATCAtccTATGAAATGGAGCACTTCTCCATACCACTGGGATATCACAGGGTATTCACTGAGAGGGCAAGGCATGTGCTTCTTCACCTGAGGGGTGATGAGGATATC---GAGGATGTCACTGCAAGGACAGTTAAGACTGCAGTCAGGAAC---------AGGAACCTCATCCTTGAGGACAGGTGGGGG------------------------GAGTTCAGG------------------------------TCAGTGATCGGTCCCAGGGTTTACCCGAGACTTGTT---------------AAGGGGATATCGAAGATTAACATGAGGATGCTTGATGCCAAGGTGACCATTGACCTCAAGAGGATACTGAGACTC---CCAACATCACTGCACTCAAAGGTCAGCATGATC
O73958_9EURY/7-313 GAAGCAACGAAG---......---GAGGAGCGGGCGAAGTACTACAGGGGGGAATGGAGCGCAAAGAGGCTGCCG------------------...GAGTTCATAGTAGAGACCCTTGAGAACAGGGAGTTTGGCTTTGAC------------CACACGGGGGAGGGCCCGAGCGACAGGAAGAACGTTTTCCTCGACGTCCGCGACCTGGAGGACTACATGAAAGCCACTGCCCCCTACGCTGTCTACTCCTCTGTTGCCCTCTATGAGGAGCCC------------AGGGAGATGGAGGGCTGGCTGGGA---------------------GCGGAGCTGGTGTTCGATATAGACGCCAAGGATCTGCCC---CTGCGGAGGTGCCAGCACATCCACGAACACGGCAAGGTCTGTCCAATTTGCCTTGAGGATGCGAAG---GAACTCGCAAGGGATACGCTGATAGTGCTGAAGGAGGACTTTGGCTTCGAA------AGCGTTCACGTGATCTACTCCGGCAGG---GGATACCACATCAGGGTTCTT------GACGACTGGCGATGGCCCTCCGACGGGAAGGCGAGGGAGAAAATTCTGGCGTATGTGAGTGCTGCAGAAGAGCTTGAT---------TACAAGAAGGACGTCcaaAGCAACAAA------ATAATGTTATCCTCCGGGTATTACCGGGTGTTCAGGATTAGATTTGGGTATTTCCTGAAGAGGATATCTGAAAATCACTTAAGGAATTTTGGGTTAAGTGAGAAACAAATAAAGGACGTGCTCGAAAAT---------ATAGACAAGATATACAACGACTTTGTTCTAAAT---GCAAAATCTCCCAATATTGCATTTCCATCCTCTCTCAGA------AGACCCCCCAAAAAAGGACTACACAAAAGCGGATTGATGATTCTCTTG---------------AACTCATCCAGTACCTTTTCAAAGGCCTACTTCGACGGTCGCGTCACCGTCGACGTAAAGAGAATCCTCCGCCTG---CCGTCTAGCCTGCACTCCAAGGTGGGCTTTATA
PRIS_PYRHO/5-304 GAGGTAACAAGA---......---GAGGAAAGAAAGAACTTTTACACCAATGAATGGAAGGTTAAGGACATACCA------------------...GATTTCATTGTGAAGACATTAGAGTTAAGGGAATTTGGATTCGAT------------CATTCGGGAGAGGGGCCTAGTGACAGGAAAAACCAATATACTGACATTAGGGATCTCGAAGATTACATAAGGGCCACGGCCCCCTATGCCGTTTATTCCAGCGTTGCACTTTATGAGAAGCCC------------CAGGAAATGGAGGGATGGTTAGGG---------------------ACTGAACTCGTCTTTGACATAGATGCTAAGGACTTACCG---TTAAGAAGGTGCGAG------CATGAGCCAGGAACAGTATGTCCAATTTGCTTAAACGACGCTAAG---GAGATAGTGAGGGATACCGTAATAATACTAAGGGAGGAGTTAGGATTCAAT------GACATACATATCATATATTCTGGAAGG---GGTTACCATATTAGAGTTTTG------GATGAATGGGCCCTCAAGCTAGATTCGAAGTCCAGGGAAAGAATTTTGTCATTTGTTTCTGCTAGTGAAATCGAGGATGTTGAAGAGTTCAGAAAACTTCTCctgAATAAGAGGGGATGGTTCGTTCTAAATCATGGATATCCAAGGGCTTTTAGGCTCAGATTTGGCTATTTTATACTGAGGATTAAGCTTCCCCACCTCATAAATGCTGGAATAAGGAAGAGCATTGCCAAGAGCATCCTTAAATCA---------AAAGAGGAAATTTACGAAGAATTCGTAAGG---------AAAGCTATTCTTGCAGCTTTTCCC------------------------------CAGGGAGTTGGAATCGAAAGCCTAGCGAAGTTGTTC---------------GCACTCTCCACCAGGTTCTCAAAGTCATACTTCGATGGGAGGGTAACCGTTGATCTAAAGAGGATTCTAAGACTC---CCTTCAACGTTGCACTCTAAGGTAGGACTAATA
PRIS_METJA/1-318 ATGAATACTTTT---......---GCTGAGGTTCAAAAATTGTATAGGGAATATTACAACTTCGCAATAAAAAAC---------------AATatcCTTGAAATCCCTGAAGGTATTGAATATAGGGAATTTGGATATGGT------------TATTTA---AAAAAAGTTGATAATAGAAACCTATCTTTTAAAAATGAAAGAGAATATAAAGATTGGGTGTTAAAAAACGCTCCAATGCACTTTTATAAATCTTTAGCTTATATGCTCTACCCA------------AATAAATCAGGTGGAGCTTCTAAAAAAGGTATATTTAGA------AGAGAATTAGCGTTTGATATAGATGTCCATAAAACAAAA---------AAATGTAAG------CATGAAGATGATTGGATTTGCAAGCATTGTTTAGAAGAGGCAAAAAATCAAGCTATCTACTTAATTGAAGAATTTTTAATTCCTGACTTTGGTTTAAATGAAGAAGATTTAAAGATTGTATTTAGTGGAAACAGGGGTTATCACATATATATAAAACCAAGAGATGAAAAAATTAGGGATATTATTGAAAGCTATTCAAAAGAAGATAGAAGATTTTTAATGGATTATATATTAGGAAAAAATTTAAACTTAAATTCAGTAGGT...------AGTGGTTGGAGAAGAAGATTAATAAAGGCAATCAAAGAAAGAGATAAAAGAATATCCACAAAAAAACTTGAAAATGAAAAAAATTGGAAAAAGGTTATTGAGAATTTAAAGAGCAAAAATAAAATATATAATATTATTGAAGAAACCAAAAATAAAATTGAATTGGATGAAAAAGTTATGGATGATGACATAAGGCTTTTGAGGGTTATAAAT---------------------TCTCTACATGGCTATACTGGCTTTATTGTTAAGCCATTAAGT------------GGTTTAGATGAATTAAGGAGATTTAACCCATTAGAAGATGCCATATTTAAAGATTTTGAAAATAAAGTGTATGAGGTTAATATATTTGATGATAGAAAATTCGAAATTGAAATA
PRI1_YEAST/7-338 ACTAATGGGCCAAGC......TCCTCAGACATGGAGTACTACTATAAGTCGCTCTATCCATTCAAACACATTTTCAACTGGCTGAATCATTCG...CCCAAACCTTCTAGGGATATGATTAACAGAGAATTCGCTATGGCG------------TTCAGG---TCAGGTGCTTACAAAAGGTATAATTCTTTTAACTCTGTGCAAGATTTCAAAGCACAAATAGAAAAAGCCAACCCAGACAGATTTGAAATCGGTGCCATATATAACAAACCGCCA------------AGAGAACGTGATACTCTATTAAAAAGCGAATTGAAAGCTTTAGAGAAGGAGTTGGTGTTTGATATTGATATGGATGATTACGATGCCTTCAGAACGTGTTGC---------TCCGGAGCCCAAGTTTGCTCTAAGTGCTGGAAATTTATATCT---TTGGCAATGAAAATTACGAACACGGCCCTAAGAGAGGATTTTGGTTATAAG------GACTTCATCTGGGTATTTTCAGGTAGACGTGGTGCTCATTGTTGGGTAAGC------GACAAACGGGCACGGGCTTTGACGGATGTACAACGAAGAAACGTTTTAGATTATGTCAACGTGATTAGA---GACAGAAATACTGACAAGCGATTGGCT---...TTGAAGAGGCCTTATCACCCTCATCTTGCTCGTTCTTTGGAGCAATTGAAACCTTTCTTTGTCAGCATTATGCTCGAAGAGCAAAATCCTTGGGAAGATGACCAACATGCTATCCAAACTTTATTGCCTGCATTATATGATAAACAATTG---ATTGATTCATTAAAGAAGTATTGGCTGGACAATCCAAGGAGGTCAAGCAAAGAGAAGTGGAATGATATAGATCAGATAGCTACATCGCTCTTCAAAGGCCCCAAGCAAGACTCTCACATAATTAAGTTACGTGAATGTAAGGAAGATCTCGTATTGATGACTCTTTATCCGAAGCTGGATGTGGAAGTTACAAAGCAAACAATTCATTTGTTAAAGGCC---CCTTTTTGTATTCATCCTGCTACGGGGAATGTC
PRI1_SCHPO/27-357 CAGGGAGCTGTGGAT......TCAGAGACGATGATTCAATATTATCGCCATCTTTTTCCGTGGAAATATTTATTTCAATGGTTAAATCATGGT...CCGGTAGTCACTAATGATTTTGCTCATCGGGAGTTCGCGTTCACA------------CTTCCT---AATGATGCTTATATTCGTTATTTATCTTTTTCAAATTGGGAAGAGTTAAAAAAGGAAGCTTTAAATTTATGCCCAAGCCGATTTGAAGTTGGACCCGTTTATAGTGCCAATCCC------------AGGGACAGGAAAACAATAAGGAAGTCAACATTTCATCCGCTTAAAAAGGAACTCGTTTTTGATATAGATATGACTGACTACGATGATGTACGAACCTGCTGC---------TCAAAAACAAATATATGCGAAAAATGCTGGCCATTTATTACG---ATCGCAGTTCAAGTTTTAGATATTTGTTTTCATGAGGACTTTGGATTTAAA------CACATATTGTGGGTATACTCTGGTCGAAGAGGTATTCACGCTTGGATTTGT------GACGAAATTGCTTGTTCTTTAGACGATCGGTCTCGTAGAATGATTGCCAGTTATTTACAGGTTGTAGTAGGTAATCCTCAAGGTGGCGTACGACTTATTAATaacTTAAAAAGACCCCTTCACCCACATTTGACTCGTTCTCTCAACATTCTCAAATCGGCCTTTGTAAAAATTGTCCTTGAAGACCAAGATCCGTGGGCTTCT---AAAGAAGGAGCCGAAAACCTTTTGAAATTACTACCAGACAAGGATTTA---GCATCTGCTCTTCGTAAAAAATGGGAGGTTGATCCTGAACGATCTAGCAAAAATAAATGGTCCGACATTGAC---------ACTGTCTTAGCATCTGGTTCTATTGCCTCTATATCTCCTTCAGTAATTGCGATTGCCAAGCAGGACATTGTTTTAACCTATTTGTATCCAAGATTGGATGTTGAGGTTTCTAGACATTTAAACCATTTGCTAAAATCT---CCATTTTGCGTCCACCCCGGAACTAGTCGTGTT
PRI1_MOUSE/7-329 GCGGAGCTGCCG---......---GAGCTACTCAAGCTTTATTACCGAAGGCTCTTTCCCTACGCCCAGTACTATCGCTGGCTCAACTATGGC...GGAGTGACAAAGAATTACTTTCAACACCGTGAATTTTCATTCACA------------CTGAAA---GATGATATTTACATTCGCTACCAGTCCTTCAACAACCAGAGTGAACTGGAGAAGGAGATGCAGAAAATGAATCCATATAAGATTGATATAGGCGCAGTATATTCTCACAGACCC------------AATCAACACAATACAGTGAAGCTGGGAGCTTTCCAGGCCCAGGAGAAAGAACTGGTCTTTGACATCGACATGACAGACTACGATGACGTAAGGAGATGCTGC---------AGTTCTGCAGACATATGTTCCAAATGCTGGACTCTCATGACA---ATGGCCATGCGCATCATAGACCGGGCATTGAAGGAGGACTTTGGATTTAAG------CACCGCCTCTGGGTCTATTCAGGAAGGAGAGGTGTGCACTGTTGGGTCTGT------GATGAATCCGTTCGAAAGCTGTCCTCTGCTGTGCGCTCCGGGATCGTGGAGTACTTGAGTCTTGTAAAGGGTGGTCAAGATGTTAAAAAGAAAGTTCAC---...CTAAATGAGAAAGTTCACCCTTTTGTCAGAAAATCTATAAACATAATTAAAAAGTACTTTGAGGAATATGCCTTAGTCGGCCAAGATATTCTTGAAAAT---AAAGAAAACTGGGATAAGATTTTAGCCCTTGTTCCTGAGACA---ATT---CATGATGAGCTGCAAAGAGGGTTCCAGAAGTTC------CACAGTTCACCTCAGCGCTGGGAACACCTGAGGAAAGTGGCCAACTCATCTCAGAAT---ATGAAGAACGATAAGTGCGGCCCCTGGCTG---------GAGTGGGAGGTCATGCTCCAGTACTGTTTCCCACGCCTGGATGTCAACGTCAGCAAGGGAGTCAATCACTTACTGAAGAGC---CCTTTCAGTGTTCATCCCAAGACAGGTCGGATT
PRI1_HUMAN/7-330 ACCGAGCTGCCC---......---GAGCTGCTTAAACTTTATTACCGGAGGCTCTTTCCCTACTCTCAGTACTATCGCTGGCTCAACTACGGT...GGAGTGATAAAGAATTACTTTCAACACCGTGAATTTTCATTCACA------------CTGAAA---GATGATATTTACATTCGCTACCAATCCTTCAACAACCAGAGTGATCTGGAAAAGGAGATGCAGAAAATGAATCCATACAAGATTGATATAGGCGCAGTATATTCTCACAGACCC------------AATCAACACAATACAGTGAAGCTGGGAGCTTTCCAGGCTCAGGAAAAAGAACTGGTATTTGACATTGACATGACAGACTACGACGATGTGAGGAGATGTTGT---------AGTTCTGCAGACATATGTCCTAAGTGCTGGACCCTCATGACA---ATGGCCATACGCATCATTGACAGAGCATTGAAGGAGGACTTTGGATTTAAG------CATCGTCTCTGGGTATATTCTGGAAGGAGAGGTGTTCATTGTTGGGTCTGT------GATGAATCAGTTAGAAAACTGTCTTCTGCAGTACGTTCTGGGATAGTTGAGTATTTGAGCCTTGTAAAGGGTGGTCAAGACGTTAAAAAGAAAGTTCAC---...CTAAGTGAAAAAATTCACCCTTTTATCAGAAAATCTATAAACATAATAAAAAAATACTTTGAAGAATATGCCTTGGTTAATCAAGATATTCTCGAAAAT---AAAGAAAGCTGGGATAAGATTTTAGCCCTTGTTCCTGAAACA---ATT---CATGATGAACTTCAACAAAGCTTCCAAAAGTCT------CACAATTCACTTCAGCGTTGGGAGCACTTGAAGAAAGTAGCCAGCAGATATCAGAATAACATCAAAAATGACAAATATGGACCCTGGCTG---------GAGTGGGAGATTATGCTCCAGTACTGTTTTCCACGGCTGGATATCAATGTCAGCAAAGGAATCAATCATCTACTGAAGAGC---CCTTTTAGTGTTCATCCTAAAACAGGTCGCATC
Y2298_ARCFU/7-279 AAGGGGATGCGCCCAtcaaccTTAAGAGAGAGGGAGAGCTTCTACCGCTACGAGTTCAGCCTCGATAGGGTTGAGAAA---------------...TGGCTTGGCTGGAGGGATATAGGCAACACCGCCTTTGCGGTAATC------------ATCGGA------------AGGCACTCCGACATTTACCTCCCGGAATATGAGGACATAAAGAGAAAGGCTGTAATCATCGACGAGCACAAAGGTTTGGCGGATGTCCTCGACTACATTCTGCAG------------TATCTGCCTGAGGGGGTTTACTACGAC------------------CGCAACGTCTACTCAGACATTAAGCTGTGCGTTGAGAGA---------GGATGC---------------GACTACAAAAACTGCTGGGGTTGTGAGAACTTTCTGGGA---------CAGGAGCTTGCATTCGACATCGACCCTGAGAACGTTTCCTGCCCC------------------------------TAC---------CACGGAAGCATAGAG------GACAAGATGAAGAGGGGGGAGGGGCTGAGCTTCTGCATGCTTGAGTTCAAAAAAGTGAGAAAGCTTACCTTAAGCCTTTACGACGAGCTCAGGGCTGAA---...------------------------TACAAAAAGTTGAGAGTGGTTTTCTCAGGCAGGGGATTCCACATCCATGTTTTCGACAGAAAAGCGTTAAAGATGAGCAGAGAGGAGCGGGTGGAGCTGGCCAAAGCCTATTCACACTAC---------GCCATTGACGAGTGGGTAACCAACGGAGAA------------ATGAGGTTGATAAGGCTACCT------------------------------TATTCCCTCAACGGGCTCGTTTCAAGGATTTGCTCC------------------CCTCTAAGCATTGAAGAGCTTCCTGCTTTCGATCCACGCAACCACTCTATTCCTTCTTTTCTGCTTTCGTCT---CCTCGCCGTAGTAGTAGAGCTTCTTCTTCTCGG