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Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF01844 - HNH)
HNH endonuclease
(
Pfam
reference: accession no.
PF01844
)
(
Interpro
reference: accession no.
IPR002711
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
213 sequences @ 133 aa
(ave. pairwise identity: 0.20)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 147.73)
nucleotides
(available for above)
210 sequences @ 399 bp
(ave. pairwise identity: 0.36)
New Hampshire format
(total tree length: 99.58)
amino acids, restricted set
(corresp. to available nt seqs)
210 sequences @ 133 aa
(ave. pairwise identity: 0.20)
New Hampshire format
(total tree length: 143.15)