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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01801 alignment
(5 sequences with 285 aa)


VGLL_MCMVK/4-265 LLLLILLSTRNLLGAAQSQESPVAGERRALDLTTVYVLPRSEPINATVEHKCREALASCYNGSEF---QPLHDDGPIRPDPYRFST--MIRFKRSYGELP--LPIELNDEFLEQLSLLHNNTDQLRVLLTLMR-TSRASDWMSFLGGYTQCDAPKSVVFTCVESVCYEHDLMRLNYTTDLFTENVLGLDVSPPV--------LSVLVLLRNNHTKAESVVRVPTS------SMSMLDGTYNLLRTILGHMSLD-TDLIGVLRSYRDRFPAVFSVSDQIKITRQHY
VGLL_GPCMV/1-257 MYECMFFSHRLTIG--------FYIPLIVLTT----MSSLSESLGERQKTACTVAAISCANSDTY--NRTTVSNHTFFYISDRWKYSELIRYEKPTGDLRHDKLIHVDREFLDIVSLLHNNENQLRTLLTIFR-SDSAPPWVKFMRGYSQCLD-HPIIYTCVEEKCQQYNLEELPYGKDIFLENVVGFDLGAPP---HN---MSVLIAVSNTKPKITKVLRITST------SLTLFDALYNTVLTFFRSIGARNVDVVRRLILYQASLSGPHRDAPIHNYLNRDL
VGLL_HCMV1/4-269 RPDCGFSFSPGPVI--------LLWCCLLLSIVSSAAVNVAPTAAEKVPAECPELTRRCLLGEVFQGDEYESWLRPLVNVTGRDGPLSQLIRYRPVTPEA-ANSVLLDEAFLDTLALLYNNPDQLRALLTLLS-SDTAPRWMTVMRGYSECGDGSPAVYTCVDDLCRGYDLTRLSYGRSIFTEHVLGFELVPPS---LF----NVVVAIRNEATRTNRAVRLPVSTAAAPEGITLFYGLYNAVKEFCLRHQLD-PPLLRHLDKYYAGLP-PELKQTRVNLPAHSR
VGLL_HHV7J/1-246 MKTNIFFIFLISI---------LNQIYALFN-----NSYYSNLEQE-----CIKNILNCTQSKTL--SLLEPIDQAPIPKSDIISR---LLYHTPYISR--RDQVLIDEDFLETFYLLYNNPNQLHTLLSLIKDSESGHNWLGFLNNFERCLS-DNTLLTCRDNVCKSYSYEKLKFTGNIFVENIIGFEFNIPSNMINF--NMSILIYLENEETRTQRIVRIDHH------GINVFDALLNCLRYFSRYYNFS-FPLIQEMEKYNEVL--PFRSE-FSNLLIRTY
VGLL_HHV6Z/1-250 MELLLFVMSLILLT--------FSKAMPLFDH----NSFYFEKLDD-----CIAAVINCTRSEVP--LLLEPIYQPPVYNEDVMS----ILLKPPTKKKP-FSRIMVTNEFLSDFLLLQDNPEQLRTLFALIGDPESRDNWLNFFNGFQTCSP-SVGITTCISDNCRKYLPERITYVNNFFVDNIAGLEFNISENTDSFYSNIGFLLYLENPATGITKIIRFPFN------SLTLFDTILNCLKYFHLKTGVE-FDLLKQMEAYNSKL--PFRSS-RPTILIRNT