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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01761 phylogeny
for nucleotide alignment


 
(((((((((((((((((((AROB_LEPIN/20-325,(((AROB_BACSU/17-324,AROB_BACCR/17-324),AROB_OCEIH/17-320),(AROB_STAEP/16-317,AROB_STAAW/16-317))),(((((((AROB_THEVO/19-321,AROB_THEAC/19-321),ARKB_THEMA/176-461),(AROB_PYRFU/4-300,AROB_PYRAB/10-305)),(AROB_SULTO/17-318,AROB_SULSO/17-319)),(((Q8A0P6_BACTN/8-314,Q7MV53_PORGI/9-314),((AROB_CHLTR/14-327,AROB_CHLMU/14-327),(AROB_CHLCV/14-333,AROB_CHLPN/15-334))),AROB_STRP3/18-323)),((AROB_CLOPE/17-324,AROB_CLOAB/17-324),(AROB_ENTFA/16-323,((AROB_STRA5/16-324,(AROB_STRMU/16-324,AROB_STRR6/16-324)),AROB_LACLA/16-325)))),(ARO1_PNECA/25-358,((ARO1_SCHPO/28-359,(ARO1_EMENI/26-359,(Q8J294_THACU/32-369,Q8X071_NEUCR/30-357))),ARO1_YEAST/17-367)))),Q7P335_FUSNV/10-316),(AROB_CAMJE/7-317,(AROB_HELHP/16-314,(O08313_HELPY/17-309,AROB_WOLSU/19-311)))),((Q8LFK9_ARATH/94-405,AROB_COXBU/19-327),((AROB_CANBF/18-329,(AROB_BUCBP/13-322,AROB_BUCAI/20-329)),((AROB_HAEDU/17-326,AROB_HAEIN/17-325),((AROB_ECOLI/17-326,AROB_PHOLL/17-327),(AROB_SHEON/18-326,AROB_VIBVU/17-326)))))),(AROB_PROMP/19-332,AROB_PROMA/21-334)),(AROB_SYNY3/18-330,AROB_ANASP/18-330)),AROB_CORPS/16-320),(AROB_LACPL/19-325,Q9S5E2_BACCI/17-324)),AROB_PROMM/33-338),AROB_SYNPX/23-336),AROB_GLOVI/17-326),(AROB_PYRAE/17-306,AROB_CHLTE/10-325)),((((AROB_NEIGO/17-325,AROB_NITEU/24-332),AROB_CHRVO/17-325),((AROB_PSEPK/17-324,AROB_PSEAE/17-324),(AROB_BORPE/17-324,AROB_RALSO/17-325))),(((AROB_BRAJA/26-344,(AROB_RHILO/22-337,(AROB_BRUSU/26-341,AROB_AGRT5/26-341))),AROB_CAUCR/18-334),(AROB_XYLFT/22-338,AROB_XANCP/22-338)))),(AROB_AERPE/21-322,((Q9RW92_DEIRA/16-308,(((P70784_ACTTI/3-289,Q9X5Q6_STRLA/22-307),((Q8GNM8_STRHY/18-303,Q9X649_STRCU/18-303),O52549_AMYMD/18-303)),O69211_ACTPA/23-308)),(((AROB_MYCTU/22-326,AROB_COREF/22-330),AROB_STRAW/23-328),AROKB_BIFLO/191-505)))),((Q7UQR4_RHOBA/44-349,Q8YZP0_ANASP/61-351),Q7NU70_CHRVO/50-354)),ACBC_ACTS5/45-349),((EGSA_METKA/16-325,(EGSA_AERPE/34-343,((((((((EGSA_METJA/11-310,(O85004_STRPN/8-314,Q97IL4_CLOAB/16-322)),EGSA_SULSO/16-323),((ARAM_BACSU/29-372,Q9KBR3_BACHD/31-383),Q9WYC1_THEMA/24-325)),EGSA_PYRAE/15-316),EGSA_THEAC/17-325),EGSA_ARCFU/14-324),EGSA_METMA/21-329),EGSA_METTH/14-320))),EGSA_HALN1/16-327)),Q82MK1_STRAW/16-323,Q9L1H9_STRCO/3-310);
(((((((((((((((((((AROB_LEPIN/20-325:0.51683,(((AROB_BACSU/17-324:0.40573,AROB_BACCR/17-324:0.33974):0.08914,AROB_OCEIH/17-320:0.36356):0.07474,(AROB_STAEP/16-317:0.21536,AROB_STAAW/16-317:0.20180):0.22417):0.06485):0.05973,(((((((AROB_THEVO/19-321:0.19261,AROB_THEAC/19-321:0.28693):0.29327,ARKB_THEMA/176-461:0.57911):0.14875,(AROB_PYRFU/4-300:0.20203,AROB_PYRAB/10-305:0.28399):0.19232):0.11372,(AROB_SULTO/17-318:0.24725,AROB_SULSO/17-319:0.19637):0.20909):0.08253,(((Q8A0P6_BACTN/8-314:0.37836,Q7MV53_PORGI/9-314:0.48671):0.27221,((AROB_CHLTR/14-327:0.14123,AROB_CHLMU/14-327:0.16560):0.25718,(AROB_CHLCV/14-333:0.21488,AROB_CHLPN/15-334:0.24073):0.11861):0.15419):0.08752,AROB_STRP3/18-323:0.48738):0.10196):0.05761,((AROB_CLOPE/17-324:0.26764,AROB_CLOAB/17-324:0.23609):0.07378,(AROB_ENTFA/16-323:0.33137,((AROB_STRA5/16-324:0.24998,(AROB_STRMU/16-324:0.15041,AROB_STRR6/16-324:0.21134):0.07844):0.05728,AROB_LACLA/16-325:0.23835):0.07276):0.16803):0.10643):0.05531,(ARO1_PNECA/25-358:0.22607,((ARO1_SCHPO/28-359:0.23441,(ARO1_EMENI/26-359:0.20729,(Q8J294_THACU/32-369:0.33715,Q8X071_NEUCR/30-357:0.22841):0.10514):0.14859):0.10795,ARO1_YEAST/17-367:0.31550):0.12471):0.23656):0.02865):0.02726,Q7P335_FUSNV/10-316:0.38790):0.04669,(AROB_CAMJE/7-317:0.28897,(AROB_HELHP/16-314:0.25622,(O08313_HELPY/17-309:0.30928,AROB_WOLSU/19-311:0.35318):0.08308):0.08476):0.13436):0.06570,((Q8LFK9_ARATH/94-405:0.37438,AROB_COXBU/19-327:0.37267):0.06832,((AROB_CANBF/18-329:0.30631,(AROB_BUCBP/13-322:0.26010,AROB_BUCAI/20-329:0.22433):0.05899):0.08063,((AROB_HAEDU/17-326:0.23788,AROB_HAEIN/17-325:0.21704):0.09628,((AROB_ECOLI/17-326:0.24043,AROB_PHOLL/17-327:0.18408):0.11807,(AROB_SHEON/18-326:0.27191,AROB_VIBVU/17-326:0.26550):0.08594):0.07582):0.05280):0.06538):0.08747):0.10143,(AROB_PROMP/19-332:0.26840,AROB_PROMA/21-334:0.27108):0.08781):0.15553,(AROB_SYNY3/18-330:0.31102,AROB_ANASP/18-330:0.20782):0.11515):0.07830,AROB_CORPS/16-320:0.56999):0.07587,(AROB_LACPL/19-325:0.52660,Q9S5E2_BACCI/17-324:0.60964):0.16745):0.14010,AROB_PROMM/33-338:0.19310):0.13590,AROB_SYNPX/23-336:0.17324):0.19180,AROB_GLOVI/17-326:0.25029):0.11898,(AROB_PYRAE/17-306:0.54487,AROB_CHLTE/10-325:0.36074):0.11766):0.07344,((((AROB_NEIGO/17-325:0.19708,AROB_NITEU/24-332:0.29106):0.06252,AROB_CHRVO/17-325:0.14642):0.07502,((AROB_PSEPK/17-324:0.15144,AROB_PSEAE/17-324:0.15238):0.15874,(AROB_BORPE/17-324:0.22605,AROB_RALSO/17-325:0.20338):0.04774):0.03664):0.09239,(((AROB_BRAJA/26-344:0.19063,(AROB_RHILO/22-337:0.13050,(AROB_BRUSU/26-341:0.21255,AROB_AGRT5/26-341:0.20488):0.05308):0.09328):0.09968,AROB_CAUCR/18-334:0.24253):0.05677,(AROB_XYLFT/22-338:0.23002,AROB_XANCP/22-338:0.13028):0.21025):0.05093):0.06059):0.05077,(AROB_AERPE/21-322:0.54832,((Q9RW92_DEIRA/16-308:0.42738,(((P70784_ACTTI/3-289:0.16131,Q9X5Q6_STRLA/22-307:0.17808):0.05207,((Q8GNM8_STRHY/18-303:0.13366,Q9X649_STRCU/18-303:0.12845):0.02537,O52549_AMYMD/18-303:0.13921):0.02311):0.04779,O69211_ACTPA/23-308:0.10565):0.13208):0.06541,(((AROB_MYCTU/22-326:0.19322,AROB_COREF/22-330:0.30902):0.06493,AROB_STRAW/23-328:0.20145):0.04917,AROKB_BIFLO/191-505:0.36155):0.13886):0.03450):0.04703):0.11651,((Q7UQR4_RHOBA/44-349:0.27772,Q8YZP0_ANASP/61-351:0.59784):0.13722,Q7NU70_CHRVO/50-354:0.35136):0.19855):0.03765,ACBC_ACTS5/45-349:0.48845):0.27014,((EGSA_METKA/16-325:0.27936,(EGSA_AERPE/34-343:0.43673,((((((((EGSA_METJA/11-310:0.27927,(O85004_STRPN/8-314:0.56168,Q97IL4_CLOAB/16-322:0.44297):0.13056):0.11337,EGSA_SULSO/16-323:0.35221):0.06289,((ARAM_BACSU/29-372:0.41602,Q9KBR3_BACHD/31-383:0.32182):0.23554,Q9WYC1_THEMA/24-325:0.59030):0.25461):0.10932,EGSA_PYRAE/15-316:0.44632):0.07835,EGSA_THEAC/17-325:0.43094):0.09284,EGSA_ARCFU/14-324:0.46380):0.10216,EGSA_METMA/21-329:0.28980):0.07419,EGSA_METTH/14-320:0.29286):0.07346):0.08414):0.08161,EGSA_HALN1/16-327:0.26229):0.16694):0.24174,Q82MK1_STRAW/16-323:0.12347,Q9L1H9_STRCO/3-310:0.09243);