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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF01721 - Bacteriocin_II)
Class II bacteriocin
(Pfam reference: accession no. PF01721)
(Interpro reference: accession no. IPR002633)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
11 sequences @ 36 aa
(ave. pairwise identity: 0.52)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 4.69)
nucleotides
(available for above)
8 sequences @ 108 bp
(ave. pairwise identity: 0.55)
New Hampshire format
(total tree length: 2.72)
amino acids, restricted set
(corresp. to available nt seqs)
8 sequences @ 36 aa
(ave. pairwise identity: 0.51)
New Hampshire format
(total tree length: 3.81)