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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF01716 - MSP) |
| Manganese-stabilising protein / photosystem II polypeptide |
| (Pfam reference: accession no. PF01716) |
| (Interpro reference: accession no. IPR002628) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
8 sequences @ 247 aa (ave. pairwise identity: 0.56) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 2.65) |
| nucleotides (available for above) |
6 sequences @ 741 bp (ave. pairwise identity: 0.56) |
New Hampshire format (total tree length: 2.10) |
|
amino acids, restricted set (corresp. to available nt seqs) |
6 sequences @ 247 aa (ave. pairwise identity: 0.55) |
New Hampshire format (total tree length: 2.15) |