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Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF01709 - DUF28)
Domain of unknown function DUF28
(
Pfam
reference: accession no.
PF01709
)
(
Interpro
reference: accession no.
IPR002876
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
48 sequences @ 277 aa
(ave. pairwise identity: 0.40)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 22.80)
nucleotides
(available for above)
45 sequences @ 831 bp
(ave. pairwise identity: 0.48)
New Hampshire format
(total tree length: 17.14)
amino acids, restricted set
(corresp. to available nt seqs)
45 sequences @ 277 aa
(ave. pairwise identity: 0.39)
New Hampshire format
(total tree length: 21.79)