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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01700 alignment
(4 sequences with 907 aa)


VP3_EHDV1/1-899 MADPPDANVP-----KTSPYLKGDELSSDSGPLLSIFALQEIMQKVRQAQSEYVAATKDVDLTVPDVQKIIDGVKELASETIYKIVQKPIISYRHVVMQSRDRFLRVDTYYERMSEVGDKIDENEPAKFYETVIKKVRHLRTEGAFILHNIPTKDHRGMEIADPEILGVDVKSILPVLTAEHRAMIQHVLDGAIIENGNIATRDVDVYLGACSESVYRIYNRLQGYIEAVQLEELRRTVTWLERLGKRKRMTFSQEFLTDFRRVDTIWVLALRLPANPRVIWDVPRCSIANLIMNIATCLPTGDMFRPNPRIASITLTQRITTTGPFAILTGSTPTAQQLDDVRKIYLALMFPGQIILDLKIDPGERMDPAVRMVAGVVGHLMFTAGPRFTNITQNMARQLDIALADFLLYMYNTRIQVQYGPTGEPLDFRIG--RGQYDCNVFRANFQTGTGYNGWGLVDVENREPAPYDHAQRYIRYCNIDSRELIHPATFGIGMNYHCYNEMLRMLVAAGKDTEAAFFRNMLPFHMVRFARINQVINEDLHSAFSMPDDQFNVLLANMVVGQQERVDPVILDISWISIWYAFNRSFEPIRRNEMLESAPLIESVYASELTVMKTDMQQMALLQRRFPDVLIEARPTHFWKAVMEVSPEPVRAIMDLAHSHSFINIRDMMRWIGLPSMQNSMKLVLEEEAWAVANDFEELMLTDQVYMYRDMLPEPRLDDIERFRQEGFYYTNMLDGPPAIDRVVQYTYEVARFEANMGQLRAALRRIMDDERWVRFGGVLRTVRIKFFDSRPPEEILQALPFDYQTNEKGG-LTYATIKYANDTTIYYLIYNVEYSNLPDSLVLINPTYVMTKVFMNKRIVERVRVGQALAVMNKRFIAFKGKMRIMDISQALKVGTKLAAPTV
VP3_BTV10/1-901 MAAQNEQRPERI---KTTPYLEGDVLSSDSGPLLSVFALQEIMQKVRQVQADYMTATREVDFTVPDVQKILDDIKTLAAEQVYKIVKVPSISFRHIVMQSRDRVLRVDTYYEEMSQVGDVITEDEPEKFYSTIIKKVRFIRGKGSFILHDIPTRDHRGMEVAEPEVLGVEFKNVLPVLTAEHRAMIQNALDGSIIENGNVATRDVDVFIGACSEPIYRIYNRLQGYIEAVQLQELRNSIGWLERLGQRKRITYSQEVLTDFRRQDTIWVLALQLPVNPQVVWDVPRSSIANLIMNIATCLPTGEYIAPNPRISSITLTQRITTTGPFAILTGSTPTAQQLNDVRKIYLALMFPGQIVLDLKIDPGERMDPAVRMVAGVVGHLLFTAGGRFTNLTQNMARQLDIALNDYLLYMYNTRVQVNYGPTGEPLDFQIG--RNQYDCNVFRADFATGTGYNGWATIDVEYRDPAPYVHAQRYIRYCGIDSRELINPTTYGIGMTYHCYNEMLRMLVAAGRDSEAAYFRSMLPFHMVRFARINQIINEDLHSVFSLPDDMFNALLPDLIAGAHQNADPVVLDVSWISLWFAFNRSFEPTHRNEMLEIAPLIESVYASELSVMKVDMRHLSLMQRRFPDVLIQARPSHFWKAVLNDSPEAVKAVMNLSHSHNFINIRDMMRWVLLPSLQPSLKLVLEEEAWAAANDFEDLMLTDQVYMHRDMLPEPRLDDIERFRQEGFYYTNMLEAPPEIDRVVQYTYEIARLQANMGQFRAALRRIMDDDDWVRFGGVLRTVRVKFFDARPPDDILQGLPFSYDTNEKGG-LSYATIKYATETTIFYLIYNVEFSNTPDSLVLINPTYTMTKVFINKRIVERVRVGQILAVLNRRFVAYKGKMRIMDITQSLKMGTKLAAPTV
VP3_AHSV4/4-905 NERIQDKNEKEK---AYAPYLDGASVSTDNGPILSVFALQEIMQKIRQNQSDMAAHAPDVDGAIPEVMTIISGIKGLLEEKDYKVINAPPNSFRTIPMQSTEYVLQVNTFYERMSEIGGPIDETDPIGFYALILEKLKFLKSEGAFILQGIATKDYRGAEIADPEIIGVSFQNALSHLAAIDRQIIQDTLNGMIIENGLVADRNVDVFRAAMSDPIYRIHNVLQGYIEGIQYGELRESVNWLMRLGLRKRIEFANDFLTDFRRADTIWIISQRLPINANVIWNVPRCHIANLITNVALCLPTGEYLMPNPRINSITITQRITQTNPFSIISGLTPTAVQMNDVRKIYLALMFPNQIILDIKPDSSHAVDPVLRMVAGVLGHVMFTYGPIMTNITPTMAELLDRALSDYLLYMYNNRIPINYGPTGQPLDFRIGA-RNQYDCNAFRADPQTGRGYNGWGVVDVQRVQPSPYDHVQRVIRYCDIDSREIIDPRTYGMNMTYPIFREMLRMLVAAGKDQEAAYLRQMLPFHMIRFARINQIINEDLLSAFSLPDQNFDVVLHNFIQGNFGETDPVVLEVSWASIWFAFVRRFEPIARSDLLEAAPLIEARYAAELSTMQMDVQQLRMMRARVPDTVINATPSQCWKAVLKNAPEPIKNLMNLSHSFSFVNVRDIVRWSQQRDIQESLAYVLNREAWAIANDFEDLMLVDHVYIQRTMLPEPRLDDINEFRRQGFFYTNMIDGAPPIGDVTHYTYAIANLQANMGQFRAAIRRTLDDNGWIQFGGMLRNIKIKFFDSRPPDEILTAMPYVYTEEERDG-VRMVAFKYATTATAYFLLYNVAYSNTPDTLITVNPTFTMTKIHMRKKIVRRVRAPDVVSQVNKRLVAYKGKMRLMDVTKCLKTGVQLARPTI
VP2_BRD/1-906 MANPQNRVQTERQQNNSSPYLRGDEVHDDPGIALSVFALQEIIRKVRESQTSLRNEGREVNPAPPEIEQIFSALRHLRDERPYRIERTLPTYYRFESSQSQERFFRVDSHFERIAAPVDNATLEEPARLMSLVSRRVDAIRDAGSFLLYNAPTHFVDGREIIDADGLGVDVSGPASPRRAEGASPATRQIDQLTVLNQDQEDTMVDTYPGACPDAVFRVHRALTAHVVHHQRDDYRNAMQWLQAYGEYKRIDFSRSLLTDVFSPDTVYIQSYHVPANPQLLWEVPRCGIPNLRAKRVLGVPHGTYITPNPRITSITIASRVTTTTSFAQLLGTIPTAAQMDDVRKIYLALMFPNQILLDIRSEPGHQVDVVAQSVAGVLGKLLFSYGPALFNITPHTPGPLIVHAPLSCKWQPMIRRTIRHGPSGRPLDFVITQGQRAFDCNQLAQNPARGNGYAGWG-VDAVGDHPTPYPHVRRRIQYLGYVPEDVIDERFCGDDLRYPLHQTMCEALAISGHVNERNYVEMMRHDHVVRFAHLSQVINRDLVSALSLPDERFNMLAAVFPRDATGPDGPLVLDISYMAIIHAFRLRFLPVSRPERIIYQPMLESVYASHLSLAKLHANNLQTFVTANSESFVEARPLDTWRAVYPRLPEPVRQIFDLTGQHSFVTGSDIGLWLRSPLVQDSLFLLCARTAWQAVDDPADIGFTRDVYIHRQPIPGYPLEDVRQFRRDAVYFTNMLEARPANGNRVILDRAIMQQRAGAGRLRMSIRELLDDGLFVQIGIALRPNYFEHPSRLPPEETLRALPFEYRARARNGPTARVTLQMLRPVSAFFMLYNADEQAFPDEMIDLVPKMSLVSLYIQQPPVERVSYDTALSVINRDFVSFRSRVRLMDLSAAFDAGSQYALPSN