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PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF01688 alignment |
| VGLI_VZVD/4-337 | IQCLISAVIFYIQVT----NALIFKGDHVSLQVNSSLTS-ILIPMQ.NDNYTEIKGQLVFIGEQLPTGTNYSGTLELLYADTV.AFCFRSVQVIRYDGCPRIRTSAFISCRYKHSWHYGNSTDRISTEPDAGVMLKITKPGINDAGVYVLLVRLDH.SRSTDGFILGVNVYTAGS----HHNIHG-..VIYTSP----------SLQNGYSTRAL----FQQARLCDLPATPKG---.SGTSLFQHMLDLRAGKSLEDNP-----------------WLHEDVVTTETKSVVKEGIENHVYPTDMSTLPEK--........--SLNDPPENLLIIIPIVASVMI-.-LTAMVIVIVISVKRRRIKKHPIY---RPNTKTRRGIQNAT------PESDVMLEAAIAQLA |
| VGLI_CHV9D/7-336 | TASIMRYLMVFMLFGIQCAAAIIYRGNYISLYVNSSATSIFLKG--.NNNDASIRGRFLFIGDQFPVTNTYNVTVELLHVNQT.TLCLQPLYRVMYGECPRIRTGAIIACRVKRSWH--YENATQLTDPNVEIIFKMNNTKVEDAGIYLLVVQLDY.TSLFDIFFVSLNVY--------PKQDTS-..NEDVNY-----------FPPVYSPS----HILNTFKICHKFPVHNG---.MEQSILQHIVTSDVDTETENLS--------------------WQKDDLGSTQKPRKNFN-PDVKVNVTHETRK--........-TLMESSADVFMIAVPITASLLV-.--ILAIIIVVTVGIYRRRSSEKRKIYRPKRTKEQASTEKRE-----RSESDVLLEAAVARLE |
| VGLI_PRVRI/9-350 | TRLPAGLLLAALTLA---ALTPRVGGVLFRGAGVSVHVAGSAVLVPgDAPNLTIDGTLLFLEGPSPSN--YSGRVELLRLDPK.RACYTREYAAEYDLCPRVHHEAFRGCLRKR----EPLARRASAAVEARRLLFVSRPAPPDAGSYVLRVRVNG.TTDLFVLTALVPPR---GRPHHPTPSSA-..-DECRP--VVG--SWHDSLRVVDPAED---AVFTTPPPIEPEPPTT---.PAPPRGTGATPEPRSDEEEEDEEG------ATT------AMTPVPGTLDANGTMVLNAS-VVSRVLLAAANAT--........-AGARGPGKIAMVLGPTIVVLLI-.-FLG--GVACAARRCARGIASTGR---DPGAARRSTRRPRG----ARPPTPSPGRP-SPSPR |
| VGLI_BHV1S/3-361 | CLLLWMVVLAARAAP---ARSLVYRGEAVGLRADGPVAF-AVHP--.TDATLALRGRLIFLEHQLPAGRRYNGTVELLRYHAA.GDCFVMLQTTAFASCPRVANNAFRSCLHADTRP-ARSERRASAAVENHVLFSIARPRPIDSGLYFLRVGIYG.GTAGSERRRDVFPL-AAFVHSFGEPGDPE..AAARTP--APSRQSRPAASGLTSSASL-YDRALARSPQAPPPRPAP---.PRAARAGPRRPERVDETTEVEAATRAGSAFALT-------TPPAGPTASPAASPSRAFS-AAAPAAAAQPAGD--........-TPARFRRQLASILVPLCVLVLL-.-LLALCAATVNCALRRRLLPCSRR---VYKPRTCAACGSGTCA--GRPPCRGAAP--SAPAT |
| VGLI_EHV1D/5-389 | TGMFSAAILLSMAIC---STAIIYRGEHMSMYLNASSEF-AVYP--.TDQSLVLVGHLLFLDGQRLPTTNYSGLIELIHYNYS.SVCYTVIQTISYESCPRVANNAFRSCLHKTSKH-YHDYFRVNASVETNVLLNITKPQPTDSGAYILRVKLDH.APTADVFGVSAFVYDLKS-KTVPDPMPT-..TQTVEPTTSYVSTPTYDYTDDVTTETE-STSTSTQQAMTSTQTPSATWG.TQLTTELPTNETVVIGQEALLCHWFQPSTRVPTLYLHLLGRTGNLPEDVLLVEDSEFLR-TTSPAHRPSASPADGddfkqtnsTSLKARNKIVAMVVIPTACVLML-.-LLVVVGAIINGAVRKHLLSCASRRIYRSGQGGASAAERRRLT--CGPTLAASSES-LADDT |
| O41525_9ALPH/14-344 | TRLLITMFLPILFLFLYGVNGFVYKGTYISMFLNTSSGF-SIFP--.-DDKFIVSGRLLFLDDQHLSVNNYSGTIEFIHFN--.NSCYTVYQTIEYFSCPRIFNNAFRSCLKKVSKH-HESQLRINSSIENGVLLEITNPKPNDSGVYFIRVQLE-.NNKTDVFGIPAFIY--------SFNMSN-..--EVNK---------SNFDDVTTSLY------TSSHPSSQTITPIY---.-LNEKHEPICHTVKKDENVYEL--------LLG-------LHGNITDDIFLDEDSELLKRVNIPTTTNNYIFKP-........-YLDQRNRKFLIIVISISIILLI-.-LLVLIGSIINNIIR-RHFSSSRR---IYRPKGNSESENIELT-CGENSVNKNNPLPKKPNR |
| Q66931_FHV1/2-363 | SSIAFIYILMAIGT----VYGIVYRGDHVSLHVDTSSGF-VIYP--.TLENFTIYGHLIFLDDQPLPVNNYNGTLEIIHYNHH.SSCYKIVQVIEYSSCPRVRNNAFRSCLHKTSMH-QYDQLSINTSVETGMLLTITSPKMEDGGIYALRVRFNH.NNKADVFGLSVFVY---SFDTRGHRHHA-..DENLNGEILTTPSPMETYVKVNTPIYDHMVTTQTTSNKSMESEPSN---.--TSISCHTFQNDPNEGETLYTHLLN----IAG------NITYDDMVMDGTTLKPRLID-MGLNLSVTSSFKNET........TQKWTPDRKVGFVIVISIAVLLL-.--LAVIGSIINSAIRKHIMVCAGRRIYIPNNDGRPSTEMTRFTRQTKPSNSSSKSLLDVPRS |
| VGLI_HHV23/3-352 | GRSLQGLAILGLWVC---ATGLVVRGPTVSLVSDSLVDAGAVGPQGfVEEDLRVFGELHFVGAQVPHTNYYDGIIELFHYPLG.NHCPRVVHVVTLTACPRRPAVAFTLCRSTHHAH-SPAYPTLELGLARQPLLRVRTATRDYAGLYVLRVWVGS.ATNASLFVLGVALS-ANG--TFVYNGSD-..YGSCDPAQLPFSAPRLGPSSVYTPG-----ASRPTPPRTTTS-PSS---.PRDPTPAPGDTGTPAPASGER---------APP------NSTRSASESRHRLTVAQVIQ-IAIPASIIAFVFLG-........-SCICFIHRCQRRYRRPRGQIYN-.-PGG-VSCAVNEAAMARLGAELRS---HPNTPPKPRRRSSSST--TMPSLTSIAEE-SEPGP |
| VGLI_HHV11/3-368 | CRPLQGLVLVGLWVC---ATSLVVRGPTVSLVSNSFVDAGALGPDGvVEEDLLILGELRFVGDQVPHTTYYDGGVELWHYPMG.HKCPRVVHVVTVTACPRRPAVAFALCRATDSTH-SPAYPTLELNLAQQPLLRVQRATRDYAGVYVLRVWVGD.APNASLFVLGMAIA-AEG--TLAYNGSA-..YGSCDPKLLPSSAPRLAPASVYQPA-----PNQASTPSTTTSTPSTTIPaPSTTIPAPQASTTPFPTGDPKPQPPGV-NHEPPS-----NATRATRDSRYALTVTQIIQ-IAIPASIIALVFLG-........-SCICFIHRCQRRYRRSRRPIYSPqMPTG-ISCAVNEAAMARLGAELKS---HPSTPPKSRRRSSR-T--PMPSLTAIAEE-SEPAG |
| Q69370_9ALPH/2-382 | GRLLGFLLASALWAR---SRVVVVRGPTISLVSDSLLAAGPVGPDGrLPGDLEVPGEFHFLGPQVPRVAYYDGAVELFHYPPV.DRCPRVVLVEELTACPRRHAVAFALCRSTRRTQ-SPAYANLTLDLARRPLLRARGFADAVVGLYVARVWVEG.ATNASLFPLDLAAFPAEGRPTEPPPGGETpvDARCDP-DAPLRAPRLGPADVFVPATP-IPPARTAEPPEATPPPARTAE.PPEATPPPVSPNPATPEAAEVGETEETPDPATPGGGRATSASPAPEASRYELTATRIVQ-IAIPALIIACVALG-........-SCSCCLGRRCRRRRPHPARIYRPpSPVAPSISAVNEAALARLGDELKR---PPESPRRAKRRPSQ-T--AVPSLTAISEE-SEAPA |
| Q88524_MEHV1/8-337 | CMVCVTLILFCIIIK---TQCMVYRGSLVSTTVDQSAQI-AFFG--.IDTVVNLYGKVLFMGDQYLEEI-YSGTMEILKWNQA.NRCYSIAHATYYADCPIISSTVFRGCRDAVVY--TRPHSRIHPQYRNGLLLTIIEPRMEDSGIYYIRTSIDG.FNKSDYARTSIFVC----------NGSS-..-GSCSN----------PRQKVSDEMCIPHVNRIAFERYLTLHVGRLP--.YGDLTLQQIRKDMTTTAPTYRT---------IR------RTTVNEGLLTAKTSPDIDLNATNLPLPISNYTDY--........--MSVIWRRVALRRIYAYLVIAI-.--IALLIVTVCSAHKRGSCSRRRR---IYIGNEPTTLTSIT----NGNFQEKETKN-VPSDI |
| Q69287_MEHV1/1-333 | MYVLQLLFWIRLFRG---IWSIVYTGTSVTLSTDQSALV-AFRG--.LDKMVNVRGQLLFLGDQTRTSS-YTGTTEILKWDEE.YKCYSVLHATSYMDCPAIDATVFRGCRDAVVY--AQPHGRVQPFPEKGTLLRIVEPRVSDTGSYYIRVSLAG.RNMSDIFRMVVIIR----------SSKS-..-WACNH----------SASSFQAHKCIRYVDRMAFENYLIGHVGNL---.LDSDSELHAIYNITPQSISTDIN----------------IVTTPFYDNSGTIYSPTVFNLFNNNSHVDAMNSTG-........-MWNTVLKYTLPRLIYFSTMIVL-.----CIIALAIYLVCERCRSPHRR---IYIGEPRSDEAPLITSAVNESFQYDYNVKETPSDV |
| Q67645_9ALPH/2-340 | ASLLGTLALLAATLAPFGAMGIVITGNHVSARIDDDHIV-IVAP--.-RPEATIQLQLFFMPGQRPHKP-YSGTVRVAFRSDItNQCYQELSEERFENCTHRSSSVFVGCKVTEY---TFSASNRLTGPPHPFKLTIRNPRPNDSGMFYVIVRLDDtKEPIDVFAIQLSVYQFAN-TAATRGLYS-..KASCRT----FGLPTVQLEAYLRTEES--WRNWQAYVATEATTTSA---.-EATTPTPVTATSASELEAEHFT-----------------FPWLENGVDHYEPTPANEN-SNVTVRLGTMSPT--........-----LIGVTVAAVVSATIGLVI-.---VISIVTRNMCTPHRKLDTVSQ---DDEERSQTRRESRK----FGPMVACEINKGADQDS |