EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01678 alignment
(24 sequences with 462 bp)


DAPF_SYNY3/156-272 ACCTGTGTGAGCATGGGTAATCCCCACTGTTTGACCTTTGTGGATGATGTGGACAGC.........CTCAACCTGACTGAG---------...---------ATTGGTCCTTTGTTTGAGCATCACCCCCAATTTTCCCAACGTACTAATACGGAGTTTATCCAG------...---------GTTTTAGGAAGCGATCGCCTGAAAATGCGG---...............------------GTCTGGGAACGGGGAGCGGGTATTACTCTAGCTTGTGGAACAGGGGCCTGTGCCACAGTGGTGGCGGCAGTATTGACCGGCCGG------...............GGCGATCGCCGTTGCACGGTGGAATTACCCGGTGGCAACTTGGAAATTGAATGGTCTGCCCAGGACAATCGG------------CTTTATATGACGGGGCCAGCCCAGAGAGTC
DAPF_PSEFL/153-269 GCAGCGGTTTCCATGGGCAACCCCCACGCCGTGCTGCGCGTGGCCGATATCAACAGT.........GCCCCGGTGCATGAG---------...---------CTGGGGCCGAAAATCGAGCATCATCCGCGCTTCCCCGCGCGAGTGAACGTCGGTTTCCTGCAA------...---------GTCATCGACCGCCACCGCGCACAATTGCGC---...............------------GTCTGGGAACGCGGTGCCGGGGAAACCCAGGCCTGCGGTACCGGCGCCTGTGCGGCCGCAGTCGCTGCGATCAGCCAGGGGTGG------...............ATGGATTCGCCGTTGTTGATCGACCTGCCCGGCGGGCGTCTGTCCATCGAATGGGCAGGCCCTGGCCAACCG------------GTGATGATGACCGGCCCGGCAGTGCGCGTA
DAPF_HAEIN/151-267 GGTGCAGTTTCAATGGGGAATCCTCATTGTGTTGTACAAGTAGATGATATTCAAACA.........GCAAATGTTGAACAG---------...---------CTTGGTCCTTTGTTAGAAAGCCATGAACGTTTTCCTGAGCGTGTCAATGCTGGTTTTATGCAA------...---------ATCATCAACAAAGAACATATTAAGCTTAGA---...............------------GTTTATGAACGTGGTGCTGGCGAAACTCAAGCCTGTGGAAGTGGTGCTTGTGCAGCTGTTGCAGTTGGCATTATGCAAGGCTTA------...............TTAAACAACAATGTCCAAGTAGATTTACCGGGCGGTTCGCTCATGATCGAATGGAATGGTGTTGGTCATCCA------------CTTTATATGACAGGCGAGGCGACCCATATT
DAPF_BACSU/160-277 ACTGCCGTTTCAATGGGAAATCCGCATATCGTTTTTCCGATCGCAGACATTGAACAG.........GCACCCTTAACGACA---------...---------CTGGGGCCGGTGATTGAGAAAGATCCGAGATTTCCGGAAGGCATCAATGTGGAATTCGTTGAA------...---------ACCGTGAATGAACAAGAATTGCATTTCCGC---...............------------GTCTGGGAACGGGGATCAGGGATTACTCAGGCATGCGGGACAGGAGCATGTGCAGCGGCAGTCGCATCTGTATTAAACGGCGTATCAAAG...............CGAAATCAAGACATCACGGTGCATTTAGCAGGCGGGGATTTGGTGATAAACTGGAAAGATAACGGCCAT---------------GTAATGATGACAGGGCCGGCTGAAACCGTT
DAPF_METJA/165-285 AGTGTCGTTAATGTTGGAAATCCACATGCGGTTATATTTGTTGAAGATAACAAC---.........ATAGATTTAGATTTTGTTAGAGAAcacTTGGATGTTATTGGGAAAGAGATAGAACACCATGAAGCATTCCCAGAGAGAATTAATGTGCATTTTGTAAAA------...---------GTTTTGAATCCTAATGAAATTAGGATTGTT---...............------------ACCTGGGAGAGGGGAGCTGGATACACAACTGCATGCGGAACAGGAACAACAGCTTCTGTAATTATGGCTCACAAACTTGGTAAA------...............ACAAATAATAGGGTTTTAGCTCACTTAGATGGTGGAGATTTGGAGATTGAGATTAAAGATGAT------------------GGAGTTTATATGATTGGAGATGCAGTAATGGTT
DAPF1_ANASP/152-267 TGTGCAGCCACAATAGGTAATCCACACTGTGTAATTCTTTTAGATGACATCAATTCC.........GAGGTTGCCAGAAAT---------...---------TTTGGCCCAATATTTGAAGGTTATCCTCTTTTCCCCAATCGCACTAATGTGCAGTTTATGAAA------...---------GTTTTAGATAGAAGCACTATTCAAATTGAA---...............------------ATTTGGGAAAGAGGAGCAGGTTACACTTTAGCTTCAGGTAGTAGTAGTAGTGCGGCGGCGGCTACTGCACATAAACTTGGTTTG------...............TGTGACTCTAAAATTATTGTCAAAATGCCTGGGGGAGACATTTTAATTCAAATTAAAGATGACTTTCAT---------------ATATCTATGACAGATTCTGTCACAAAACTT
DAPF_STRCO/152-274 CGGAACGTGAACATGGGCAACCCGCACGCGGTCGCCTTCGTCGCCGACCTCGACCAC.........GCGGGCGACCTGTAC---------...---------GCCCCGCCCTCGCACGCGCCCGCCGGCGCCTATCCGGACGGGGTCAACGTCGAGTTCGTGGTC------...---------GACCGGGGCCCCCGCCACGTCGCGATGCGC---...............------------GTGCACGAGCGCGGCTCCGGCGAGACCCGCTCCTGCGGTACGGGCGCGTGCGCCGTCGCCGTCGCCACCGCCCGCCGGGACGGCCTCGACcccgcggccaccgggACCCCGGCCACCTACACCGTCGACGTGCCCGGCGGCACCCTGGTGATCACCGAGCGCCCGGACGGCGAG---------------ATCGAGATGACGGGGCCGGCCGTGATCGTC
DAPF_MYCTU/157-275 CTGGCCGTCGATGTGGGTAACCCGCATCTGGCGTGCGTGGATTCCCAGCTGACCGTC.........GACGGCCTGGCGGCATTGGAC---...------GTGGGTGCGCCGGTGAGTTTCGATGGTGCGCAGTTCCCCGACGGGGTCAATGTCGAGGTACTCACC------...---------GCGCCGGTCGACGGGGCGGTCTGGATGCGG---...............------------GTTCACGAACGCGGCGTGGGGGAAACCCGCTCGTGTGGCACCGGGACGGTTGCGGCCGCGGTCGCCGCGTTGGCGGCGGTGGGC---TCG...............CCGACCGGAACGCTCACCGTGCACGTGCCGGGCGGAGAGGTCGTGGTTACCGTCACCGATGCCACCAGC------------------TTCCTGCGTGGGCCGTCAGTGTTGGTG
DAPF_MYCLE/161-279 GTAGCGGTAGACGTGGGTAACCCACACCTGGCGTGCATGGATCCGCAGCTGAGTTTG.........GAAGAGCTCGCAGCTCTAGAC---...------TTGGGTGCGCCGGTCCACCTCGACCGTGTGCAGTTTCCAGACGGGGTCAATATCGAAGTGCTCACC------...---------GCACCGGTCGACGGAATGGTCCAGATGCGA---...............------------GTCCACGAGCGCGGGGTGGGTGAAACTCGGTCATGCGGTACCGGAACTGTCGCGGCCGCGGTCGCTGCGCTGGCAAGTGCTGGC---GCC...............GACACCGGGACGCTTACTGTGAGGGTGCCGGGTGGCGACGTTGTCATAACTATCACTGACGTGACCAGC------------------TACTTGCGTGGACCATCGGTGTTAGTG
DAPF_HELPY/144-258 TATCTCATAGATACAGGAGTGCCGCATTTAGTGGGATTTGTGGAAAATAAAGAGGGG.........TTAAATTCCCTTAAC---------...---------ACGCTAGAATTAAGGGCTTTAAGGCATGAATTTAACGCTAATATTAACATCGCTTTTATAGAA------...---------------AATAAAGAGACGATTTTTTTACAAACT...............------------TATGAAAGAGGGGTTGAAGATTTCACGCTGGCTTGCGGGACAGGCATGGCGGCGGTTTTTATCGCCGCACGCATTTTTTATAACACGCCT...............---AAAAAAGCCGCTCTCATCCCTAAAAGCAACGAATCTTTAGAGCTTTCTTTAAAAAATGATGGA------------------ATTTTTTATAAAGGCGCGGTGCGTTATATT
DAPF_ARCFU/153-266 TACGCTGCCAACACCGGAGTGCCGCACGTGGCCGTTTTCGTGGACAGTCTCGACTTC.........---GACATCGTCCCC---------...---------CTTGCGAGAAAAATCCGCTATTCCGAGATTTTTCCGGAGGGAACCAACGTAAACTTTGCGAAA------...------------GTTGATGGGGACACAATTACGGTCAGA---...............---------ACCTACGAGAGGGGTGTTGAAGGGGAAACACTGAGCTGCGGAACCGGAAGCGTTGCCGTTGCGGCAATAGCAAACAGGCTCGGCCTAACCGGA...............------AGTAAGGTTGACGTTGTAACGAAGGGAGGTTTGCTCAAGATAGAGCTTACAGAGGATACT------------------GCCTACATGACGGGTGGGGCGAGCAGAGTT
DAPF_AQUAE/147-267 GTTTTCATAAATACGGGTGTTCCGCACTTCGTAGTTCCTGTGGAAGATGTTGAAAAG.........GTAAACGTGATAAAG---------...------CTCGGTAGGGCTATAAGGTTTCACGAAGAATTCCAGCCGAAGGGAACGAACGTAAACTTCGTCCAG------...---------CCGGTAAGCGAGGATACTATAAAAGTGAGA---...............---------ACATATGAAAGGGGAGTTGAGAGTGAAACGCTCGCCTGCGGAACGGGAGCTACCGCCTGTGCCATTGTTTCTTACTTAAAGGGTCTAGTGAAG...............---AAAAAGCCCGTAAACGTTCTAACTAGAAGCGGTGAGGTACTCACGATAGATTTTTCGGAGGATTTAAAA---------GAAGTCTTCCTAACGGGTTCTGTTTACAAGGTT
DAPF_SYNY3/5-126 TTTAGTAAATACCACGGTCTCGGCAACGACTTTATTTTGGTGGATAACCGCCAAAGT.........ACGGAACCCTGCTTAACC------...---CCAGACCAAGCCCAACAGTTGTGCGATCGCCATTTTGGCATTGGGGCGGACGGGGTGATTTTTGCTTTGCCG---...---------GGGCAGGGGGGAACGGACTACACCATGCGG---...............------------ATTTTTAATTCCGACGGTTCGGAGCCGGAAATGTGCGGCAATGGC---ATCCGTTGTTTGGCCAAGTTTTTGGCAGACCTAGAAGGGGTG...............GAGGAAAAGACCTATCGCATCCACACGTTGGCGGGGGTAATTACGCCCCAACTGTTGGCCGACGGCCAG------------GTCAAAGTAGATATGGGGGAACCCCAATTATTG
DAPF_BACSU/6-131 TTTACCAAAATGCACGGCCTGGGAAACAGTTATATTTATGTGAATCAATTTGAAGAA.........CAGCTTCCAGAAGAAAAA------...CTGTCAGAGATTGCAATTCAGGTTTCTTCTGTTTATACAGGGATCGGATCCGACGGAATGATCCTGATATGC------...---------CCATCAGACCAAGCGCCTGTTAAAATGCGG---...............------------ATTTTTAATAATGACGGGTCTGAAGGGAAAAACTGCGGCAACGGC---CTGCGCTGCGTCGCAAAATACGCATATGAGCATAAGCTGGTT...............GAGGAAACATCTTTTCTGATTGAAACTCTCTCCGGGCTTGTGAAAGCGGAGGTTCAAGTCGAAAACGGAAAAGTGAATGTGGTCACTGTCGATATGGGCGAACCGCGCTTGACA
DAPF_METJA/3-130 TTTACAAAGATGCATGCCCTTGGGAATGATTACATAGTTATTAATGAATTTGACGGG.........GAAAAAGTTAAAGAAGAAGAAAAA...---GCAGAGTTCTCAAGAAAAATTTGTAGAAGAGGTTTTTCAGTAGGTGCTGATGGAGTTATTTTCATCCAAAAGCCA...---------ACATCTGATGAATACGATGTAAGATTTAGA---...............------------ATATTTAACAGTGACGGCTCTGAGGCAGAGATGTGTGGTAATGGA---ATTAGATGTTTTTCAAAATACGTTTATGAGAGA---ATAATG...............AAAAAAAATCCTTTAAAAGTAGAGACAAAAGGGGGCTTAAGAGTATCTGAAATGGAGATAGAAGGAGATGAAGTAAAGAAGATTAAAGTTTATATGGGAGTTCCAAAGTTTAAA
DAPF_ARCFU/5-128 TTTACTAAAATGCACGGTAACGGTAACGACTTCGTCCTGATTGACGAATTCGAAGGA.........GTGATTGTGGGAGAAGAGGAGAAG...---CCGAGGTTTGTAAGGGCAGTATGCCACAGAAACTTCGGCGTTGGTGCTGACGGTGCGCTTTTTGTTCAG------...---------CCCTCGCAAAAGGCGGACGTCAGGTTCAGG---...............------------TACTTCAACAGCGATGGCAGCGAGGCTGCGATGTGCGGGAACGGT---ATAAGGTGCTTCTCCCGCTACGTCGTGGAGGAG---GGCTAT...............GCTGGGGAGAGGTTGAGAGTAGAAACCCTCGCTGGGATTCTTGAGCTTGAGGTAAAGAGGGAGAACGGC------TGGTGGGTGAAGGTTGACATGGGAAAGCCTAAGTTTGGA
DAPF_AQUAE/3-132 TTCTGGAAGCTACAGGGATCGGGAAACGACTTCGTGGTAATAGACGACAGGGACGAAaaactcgaaAGCTTTTTAAAGGAAAGAGGTGTAtcaAAAGAAGATTTTGTTAGGAAGGTGTGTGCCTTTCACACGGGAGTCGGTGCGGATGGGTTGATACTCATTAAAAATCCA...---------GACAATCCTGAAAACGACTTCAAGTGGGAG---...............------------TTTTTTAACTCCGACGGTTCCGTGGCGGAGATGTGCGGGAACGGT---TCGAGGTGTGCCGTTAGGTTTGCATACGAAAGGGGAATTGTA...............---GGGAATAAGGTCAGGTTTGAAACCCTTGCGGGTGTTATAAAGGCGGAGGTTTACGAAAACGGAAGGAAG---------GTAAAGGTTCAGTTGACGCCTCCCTCAAAGCCC
DAPF1_ANASP/3-124 TTCTACAAATATCATGCTCTTGGTAACGACTATTTAGTTATCAATCCTCAGGATTTA.........AAATTTCCCCTAACA---------...---CCTGAAAAAATTAAAATAATTTGCCATCGAAATTTTGGCATTGGATCTGATGGTATTTTGTTGGGGCCT------...------TTAGCATCAACAAAAGCACAATTTGCTTTACGC---...............------------ATTTTCAACCCCGACGGAAGTGAAGCAGAGAAAAGCGGTAATGGA---CTGCGGATTTTCTCCCGTTACCTGTGGGATATGGGACTAGTT...............GACGAAAAGCCATTCTCAATTGAAACTGCGGGTGGAATAGTGGAATCTGCGATCAAAGATGCAGGTAAAACA---------GTCCAAGTAGAGATGGGGAAAGTCAGCTTTTGG
DAPF_PSEFL/5-126 TTTACCAAGATGCACGGCCTGGGCAATGACTTCATGGTCCTCGACCTGGTCAGCCAG.........CACGCGCACATCCTG---------...---CCCAAGCACGCCAAGCAATGGGGAGACCGGCACACCGGTATCGGTTTCGACCAGTTGCTGATCGTCGAGGCACCC...---------AATAACCCGGACGTGGATTTCCGTTATCGG---...............------------ATCTTCAACGCCGACGGTTCGGAAGTGGAGCAATGCGGCAATGGC---GCGCGCTGCTTCGCCCGCTTCGTGCTGGACAAGCGCCTGACC...............GCCAAGCGGCAGATCCGCGTCGAGACCAAGAGCGGCATCATCGAACTGGATGTGCGCAGCGACGGCCAG------------ATCGGCGTCAACATGGGCGCTCCGCGCCTGGTA
DAPF_HAEIN/3-124 TTTTCCAAAATGCACGGATTAGGTAACGATTTTGTTGTGGTTGATGGAGTCACTCAA.........AATGTGTTTTTTACT---------...---CCAGAAACGATCCGACGTTTAGCCAATCGCCATTGTGGAATTGGGTTTGATCAACTTTTAATTGTTGAAGCTCCT...---------TACGATCCCGAACTCGACTTTCATTATAGA---...............------------ATTTTTAATGCTGATGGAAGCGAAGTTTCGCAATGCGGAAATGGT---GCTCGTTGTTTTGCTCGGTTTGTGACATTAAAAGGGCTAACT...............AACAAAAAAGACATCTCGGTTAGCACACAAAAGGGTAATATGGTTTTGACGGTAAAAGATGACAATCAA------------ATTCGTGTGAATATGGGCGAACCAATTTGGGAA
DAPF_STRCO/7-135 TTCCTCAAGGGTCACGGCACCGAGAACGACTTCGTGATCGTTCCCGACCCGGAGAAC.........GCCCTCGACCTGCCC---------...---CCCGCCGCCGTCGCCGCCCTGTGCGACCGCCGAGCGGGCCTCGGCGGGGACGGCCTGCTGCACGTGGTGCGGTCCgcgGCGCACCCCGAGGCCCGGGGCATGGCCGCCGAGGCGGAG---...............TGGTTCATGGACTACCGCAACGGCGACGGCTCGGTCGCGGAGATGTGCGGCAACGGC---GTGCGGGTCTTCGCGCGCTACCTCCAGCACGCCGGGCACGTC...............ACCGAGGGAGACCTCGCCGTCGCCACGCGCGGGGGC---------GTGAAGACCGTGCACATCGCCAAG---AACGGCGACGTCACCGTCGGCATGGGCCGGGCG---CTGCTG
DAPF_MYCTU/3-142 TTCGCGAAGGGCCACGGTACCCAGAACGACTTCGTGTTGCTGCCTGACGTCGACGCC.........GAGTTGGTGCTCACC---------...---GCTGCCCGGGTGGCGGCATTGTGCGACCGGCGGAAGGGGCTGGGCGCCGACGGGGTGTTGCGGGTTACGACCGCCggaGCCGCCCAGGCGGTAGGAGTGCTGGACAGCCTGCCCGAGGGTgtccgcgtgaccgacTGGTACATGGATTACCGCAACGCCGACGGGTCGGCAGCCCAGATGTGCGGCAACGGT---GTGCGAGTGTTCGCGCACTACTTGCGTGCCAGTGGCCTGGAG...............GTTCGCGACGAGTTCGTCGTAGGGTCACTGGCCGGACCGCGACCAGTCACCTGCCACCACGTCGAGGCGGCCTACGCCGACGTCTCCGTCGACATGGGCAAGGCCAACAGATTG
DAPF_MYCLE/3-142 TTCGCCAAGGGGCACGGCACCCAAAATGACTTTGTGGTGTTGCCTGATGTCGAGGCT.........GATGTGACGTTCACC---------...---GCTGCCCAGGTCGCTGCATTGTGCAACCGGCGCCAAGGACTGGGCGCTGACGGGGTGCTCCGGGTGACTACCGCGggcGCAGCAGTGACGGCCGGTGTGCTCGAGCACCTGCCTGACGGTgtcagctgctccgacTGGTACATGGATTACCGCAACGCCGACGGGTCGGTGGCGCAGATGTGTGGCAACGGT---GTGCGGGTGTTCGCGCATTACCTGCGCGCCAGCGGCTTGGAG...............TCTTGCGATGAGTTCGTCGTTGGCTCATTGGCTGGCCCGCGACTGGTTAACGTGCACCATGTCGACGAGCTCAACGCCGACGTCACAGTCGACATGGGCAAGGCAAACTTGCTG
DAPF_HELPY/3-118 TTTTACAAGTATTCAGGGAGCGGGAATGATTTTTTAATCGTTCAAAGTTTCAAAAAA.........AAAGATTTTTCAAAT---------...---------TTAGCCAAACAGGTGTGCCATAGGCATGAGGGTTTTGGGGCTGATGGGCTTGTAGTCGTCTTA------...---------CCGAGTAAGGATTATGACTACGAATGGGAT---...............------------TTTTACAATTCAGACGGCTCTAAAGCTGGCATGTGCGGGAATGCG---AGCCGTTGCGTGGGGTTATTTGCTTACCAGCATGCTATAGCC...............---------TCTAAAAACCATGTTTTTTTAGCCGGAAAAAGAGAGATTTCTATTTGCATAGAAGAACCCAAT------ATCATAGAGAGCAATCTTGGTAACTAC---AAAATC