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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01676 phylogeny
for restricted amino acid alignment


 
(((((((GPMI_BACSU/372-487,(((((PMGI_MAIZE/400-527,(PMGI_RICCO/397-524,PMGI_MESCR/400-527)),PMGI_TOBAC/400-527),(GPMI_ECOLI/373-489,GPMI_PSESM/369-485)),(GPMI_SYNY3/368-483,(GPMI_ANTSP/369-484,GPMI_PORPU/371-486))),O44742_CAEEL/396-511)),(GPMI_HELPY/356-471,(GPMI_MYCGE/367-482,GPMI_MYCPN/367-482))),(APGM2_METJA/273-378,(((APGM_PYRHO/275-382,APGM1_METJA/274-381),((APGM_AQUAE/273-377,APGM1_ARCFU/272-378),(APGM2_ARCFU/253-361,APGM2_METTH/267-375))),APGM1_METTH/276-379))),YHFW_ECOLI/268-376),(DEOB_HELPY/276-385,DEOB_ECOLI/276-385)),DEOB_LACLC/276-385),DEOB_BACSU/258-367,DEOB_BACST/257-366);
(((((((GPMI_BACSU/372-487:0.46263,(((((PMGI_MAIZE/400-527:0.07496,(PMGI_RICCO/397-524:0.05721,PMGI_MESCR/400-527:0.02217):0.02758):0.03564,PMGI_TOBAC/400-527:0.06998):0.88559,(GPMI_ECOLI/373-489:0.29558,GPMI_PSESM/369-485:0.19454):0.14063):0.11930,(GPMI_SYNY3/368-483:0.28441,(GPMI_ANTSP/369-484:0.48781,GPMI_PORPU/371-486:0.28369):0.15587):0.31075):0.14271,O44742_CAEEL/396-511:0.62518):0.12537):0.24361,(GPMI_HELPY/356-471:0.53401,(GPMI_MYCGE/367-482:0.01889,GPMI_MYCPN/367-482:0.32583):0.61838):0.12643):0.47325,(APGM2_METJA/273-378:0.70168,(((APGM_PYRHO/275-382:0.54439,APGM1_METJA/274-381:0.31275):0.14630,((APGM_AQUAE/273-377:1.23350,APGM1_ARCFU/272-378:0.33332):0.06807,(APGM2_ARCFU/253-361:0.50847,APGM2_METTH/267-375:0.43224):0.50413):0.10866):0.27311,APGM1_METTH/276-379:0.51091):0.09397):0.56758):0.43659,YHFW_ECOLI/268-376:0.85592):0.32961,(DEOB_HELPY/276-385:0.35278,DEOB_ECOLI/276-385:0.36670):0.31823):0.21293,DEOB_LACLC/276-385:0.43542):0.30438,DEOB_BACSU/258-367:0.14705,DEOB_BACST/257-366:0.18818);