EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01676 alignment
(28 sequences with 390 bp)


GPMI_PORPU/371-486 GATATGTCCGCTGAATTAGTAACTCAAAAAAGTATTAGTGCTATAAATAAAGGTATCTATTCTTGTATTGTAATTAACTATGCTAATGCAGAC---ATGTTAGGTCACACAGGAAAATTAAAAGAAACAATTAGATCTATTGAAACAGTCGATAATTGTATCGCCCTT...CTATTTGATGCGGTAAGTCAATCAAACGGGACATTAATAATTACTGCAGATCATGGTAATGCTGAATGTATGCTCACAAATGAA---.................................GGAACTTCTTGCACATCACATACTACTAATCTAGTTCCATTCATTTTGATTGAAGGCGAACAAGCAACTATATCTGGTCATGGGGGTCAAGTAGAATTT
GPMI_SYNY3/368-483 CAGATGTCTGCCAAAGCCGTTACCGATGCGGTTTGTCGGGCCATGGAAAAAGGCATTTATTCCCTGGTGGTGGTCAACTATGCCAACCCCGAT---ATGGTGGGACACACCGGCAAGCTCAAAGAAGCCATTCAGGCGATCGAAACCGTCGACCTCAATTTGGGCCGC...CTTCTGGCCAGCGCCGCTAAAGTGGGGGGCACCGTGTTGATCACCGCGGACCATGGCAATGCGGAATATATGAGCGATGAATCC---.................................GGCAATCCCTGGACCGCCCACACCACTAATCCGGTGCCGTTTATTTTGGTGGAAGGGGAAGGACGTAAAATTCCTGGCCACGGCGGTGAAGTCAAGCTA
GPMI_ANTSP/369-484 GAAATGTCTGCATATCAATTAACTAACAGCCTAATAGAAGCAATTAATAAACAACTATATCAATTTATAGTAATAAATTATGCAAATCCGGAT---ATGATAGGACATACAGGCAATATGAATGCAACAATAGAAGCAATAGAAATTGTTGATCAATGTATTGAAAAA...GTTTTACATACAATTGAAGATACGAACAATATACTTATTATTACATCTGATCATGGTAATGCAGATTATATGCTAACAGATGAA---.................................AATAAACCATGCACATCACATAGTATTAACCCAGTTCCTTTTATATTAATAAACAATAGACAAAAAAAACAAACAAATTTACATTCTCATGGATCATTA
O44742_CAEEL/396-511 GAAATGTCTGCGGCCGGCGTTGCTGACAAAATGATTGAACAACTCGAGGCTGGAACTCATCCATTCATTATGTGCAACTTTGCTCCACCAGAT---ATGGTCGGGCATACGGGAGTCTATGAAGCTGCTGTCAAGGCCTGTGAAGCTACTGATATCGCAATCGGAAGA...ATCTATGAAGCAACTCAAAAGCACGGATACTCACTTATGGTTACTGCTGATCACGGAAATGCTGAAAAGATGAAGGCTCCAGAT---.................................GGTGGAAAACACACTGCTCACACATGTTACCGTGTTCCACTCACTTTGAGCCATCCAGGATTCAAATTTGTCGATCCAGCCGACCGTCATCCGGCCCTT
GPMI_BACSU/372-487 GAGATGAGTGCGTATGAAGTGAAAGACGCGCTTGTCAAAGAAATTGAAGCTGACAAGCATGACGCGATCATTCTTAACTTCGCAAACCCTGAT---ATGGTCGGCCACTCCGGAATGGTTGAACCAACAATTAAAGCAATTGAAGCAGTGGACGAATGCTTGGGCGAA...GTCGTTGACGCGATCCTTGCTAAAGGCGGACACGCTATCATTACCGCTGATCACGGTAATGCTGACATTCTGATTACAGAATCA---.................................GGCGAACCGCACACTGCGCATACAACAAACCCAGTCCCTGTGATTGTAACGAAAGAAGGCATTACGCTGCGTGAAGGCGGAATCCTAGGCGACCTTGCA
GPMI_PSESM/369-485 GAAATGAGCGCGCCGGAAGTGACCGACAAGATCGTCGACGCCATCGAGCATCAGCGTTACGACGTCATCATCGTCAACTACGCCAACGGCGAC---ATGGTTGGCCATAGCGGCATCATGGAAGCGGCGATCAAGGCCGTGGAATACCTCGACGTGTGTGTCGGACGG...ATTACCGATGCGCTGGAGAAAGTCGGCGGTGAAGCACTGATCACCGCCGACCACGGCAACGTCGAGCAGATGACCGATGACGCCACA.................................GGCCAGGCGCACACCGCGCACACGTCCGAGCCTGTACCTTTTGTGTACGTCGGCAAACGTCAGTTGAAGGTCCGCGAAGGCGGCGTTCTGGCCGACGTG
GPMI_ECOLI/373-489 GAAATGAGCTCCGCAGAGCTGACCGAAAAACTGGTTGCGGCCATCAAGAGCGGCAAATACGACACCATCATCTGTAACTATCCGAACGGCGAC---ATGGTAGGTCACACCGGGGTGATGGAAGCGGCGGTTAAAGCGGTTGAAGCGCTGGATCACTGCGTGGAAGAA...GTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCAGATGCGCGATCCGGCAACG.................................GGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGAAAGCGGTTGAAGGCGGCAAACTTTCTGACATC
PMGI_TOBAC/400-527 AAAATGAAGGCGCTGGAGATTGCTGAAAGGACTAGAGATGCCATCCTTAGCGGGAAATTTGACCAGGTACGTGTGAACCTACCTAACGGTGAT---ATGGTTGGACATACTGGTGATATAAAAGCAACTATTGAAGCTTGCAAGTCTGCTGATGAGGCTGTCAAGATG...ATCCTTGAAGCTATTGAACAAGTTGGTGGAATATATCTAGTTACTGCCGACCATGGAAATGCTGAAGATATGGTTAAGAGAAATAAGaagggggagccagctcttgacaagaatgggaatATTCAGATACTCACTTCTCACACTTGCGAACCTGTTCCTATTGCAATTGGTGGTCCTGGACTGGCACCCGGTGTGAGATTCCGCCAAGATCTCCCTACC
PMGI_MESCR/400-527 AAGATGAAGGCTTTGGAGATTGCTGAGAAGGCAAGGGATGCGATTCTCAGCGGTAAATTCGATCAGGTTCGTGTCAACCTACCCAATAGTGAT---ATGGTCGGCCATACTGGTGATATAGAAGCTACCGTCGTTGCTTGCAAGGCTGCAGATGAAGCTGTCAAGATG...ATCATTGATGCAATTGAGCAAGTTGGTGGAATATATGTTATCACTGCTGACCATGGAAATGCTGAAGACATGGTGAAGAGGGACAAGaaaggacaacctgctatggacaagaatggaaacATTCAGATTCTTACATCTCACACACTAGAACCGGTGCCCATTGCTATCGGAGGTCCTGGCCTCACTCCTGGTGTGAGATTCCGCAATGATATTCCTACC
PMGI_RICCO/397-524 AAGATGAAGGCAATAGAGATTGCAGAGAAGGCAAGGGATGCTATCCTCAGTGGCAAATTCCAGCAGGTTCGTGTTAACATACCAAATGGTGAC---ATGGTTGGACATACAGGAGATGTTGAAGCCACAGTTGTCGGTTGCAAGGCTGCTGACGAAGCTGTGAAGATG...ATCATTGATGCTATAGAGCAAGTCGGTGGAATATATGTTGTTACTGCAGATCACGGCAATGCAGAAGACATGGTAAAGAGGGACAAGtctgggaaacctatggctgataagagtggcaagATTCAGATTCTCACATCTCACACTCTGCAGCCTGTGCCTATTGCCATAGGAGGTCCTGGATTGACACCTGGAGTGAGGTTCCGCAGCGATATTCCTACT
PMGI_MAIZE/400-527 AATATGAAGGCGCTTGAAATTGCTGAGAAAGCCAGGGATGCTCTCCTAAGTGGAAAGTTTGACCAGGTACGTGTCAACCTGCCAAATGGTGAC---ATGGTTGGTCACACTGGTGATATTGAGGCCACCGTAGTTGCTTGCAAGGCAGCTGATGAAGCTGTTAAGATT...ATTTTGGATGCTGTCGAGCAAGTTGGTGGTATTTACCTTGTTACCGCCGATCATGGCAATGCTGAGGATATGGTGAAAAGGAACAAGtctggcaagccgttgctcgacaagaatgaccgtATCCAGATTCTTACCTCGCATACCCTTCAGCCGGTCCCGGTTGCCATTGGAGGCCCTGGCCTTCACCCTGGAGTGAAATTCCGGAACGACATCCAAACC
GPMI_MYCPN/367-482 GCACCGGAAATGGCATGTAAGGGGATAACTGATCAATTACTAAATCAAATTAACCAGTTCGATTTGACGGTGTTGAACTTTGCCAACCCTGAT---ATGGTAGGTCATACTGGTAACTATGCCGCTTGTGTGCAGGGCTTAGAGGCCTTGGATGTGCAAATACAGCGC...ATTATTGATTTCTGCAAGGCTAACCACATTACCCTGTTCTTAACTGCTGACCATGGTAACGCGGAAGAGATGATTGACAGCAAC---.................................AATAACCCAGTTACCAAACACACTGTCAACAAGGTGCCGTTTGTATGTACTGATACAAACATTGACTTACAACAAGACAGTGCTAGTCTAGCCAATATT
GPMI_MYCGE/367-482 GCTCCCGAAATGTCATGTAAAGCTATTACTGATGCACTACTAGAAAAGCTTAATAACTTTGATTTTACTGTTTTAAATTTTGCTAATCCTGAT---ATGGTAGGTCATACTGGTAACTATCAAGCTTGCATTAAAGCTCTTGAAGCACTCGATGTTCAAATTAAACGA...ATAGTTGATTTTTGTAAAGCTAATCAAATAACTATGTTTTTAACTGCAGATCATGGGAATGCAGAAGTGATGATTGATAATAAT---.................................AACAATCCAGTTACTAAACACACTATTAATCCTGTACCATTTGTATGTACTGACAAAAATGTTAACTTTAATCAAACTGGAATTTTAGCTAATATTGCT
GPMI_HELPY/356-471 CCTGAAATGAGCGCTAAAGAAGTAACCCTTGCGGTGTTAGAGCAAATGAAACTAGGCACGGATTTGATCATTGTGAATTTTGCTAATGGCGAT---ATGGTAGGGCATACGGGGAATTTTGAAGCGAGCGTCAAAGCGGTGGAAGCAGTGGATGCATGTTTAGGGGAA...ATCCTTTCACTGGCTAAAAAATTGGATTACGCCATGCTTTTAACCAGCGATCATGGGAATTGCGAGCGCATGAAAGACGAAAAC---.................................CAAAACCCCTTAACCAACCACACCGCCGGGAGCGTGTATTGCTTTGTTTTAGGGGATGGAGTCAAATCCATAAAAAACGGAGCCTTAAACAATATCGCT
YHFW_ECOLI/268-376 CTGGTGGATAGCCAGCGGATTATGGATATCACCCTCAACGAATTTAACACCCATCCGACGGCGTTTATTTGCACCAACATTCAGGAAACCGAC---CTCGCTGGTCATGCAGAAGACGTCGCACGTTATGCCGAACGTTTGCAGGTCGTTGACCGTAACCTTGCCCGG...CTTGTTGAGGCGATGCAGCCAGATGAT---TGCCTGGTCGTGATGGCGGATCACGGCAACGATCCGACCATTGGTCACAGCCAC---.................................------------------CATACCCGCGAAGTGGTGCCAGTGCTGGTTTATCAGCAAGGGATGATCGCTACGCAGCTCGGTGTGCGCACCACGCTTTCT
DEOB_ECOLI/276-385 ACTGGCCTGGACGCGCTGTTTGACGCCACCATCAAAGAGATGAAAGAAGCGGGTGATAACACCATCGTCTTCACCAACTTCGTTGACTTCGACTCTTCCTGGGGCCACCGTCGCGACGTCGCCGGTTATGCCGCGGGTCTGGAACTGTTCGACCGCCGTCTGCCGGAG...CTGATGTCTCTGCTGCGCGATGACGAC---ATCCTGATCCTCACCGCTGACCACGGTTGCGATCCGACCTGGACCGGTACTGAC---.................................------------------CACACGCGTGAACACATTCCGGTACTGGTATATGGCCCGAAAGTAAAACCGGGCTCACTGGGTCATCGTGAAACCTTCGCG
DEOB_HELPY/276-385 GGTAGTTTGATGGAGCTATGCGATGTTACTTTAGAGCAAGTCAAAAACGCTAAAAACAACAGCTTGATTTTTACGAATTTTGTGCATTTTGATAGCGATTATGGGCATAGGCGCGATATTAGCGGGTATGCTAACGCTTTAGAGTATTTTGATGCGCGTTTAAAAGAG...GTTTTAGAAAATTTAAGGGAAAACGAT---TTGCTCATTCTTTGCGCCGATCATGGGTGTGATCCCAGCTTTAAAGGCACCGAT---.................................------------------CACACACGAGAATACATTCCTGTTTTGTTCTACCATAAAGATTTACAACCAGCCTTTTTAGGCAAGAGCGAGTCGTTTGCG
DEOB_LACLC/276-385 AATGACATGGATGGGGTTGATCGTCTACTTAAAGCAATGACGAAAACTGAATTTACTGAAGGATTTTCTTTTACAAACTTAGTTGATTTCGATGCGAAATATGGACATCGTCGCGATGTTGAAGGTTACGGAAAAGCAATTGAAGACTTTGACGGTCGCTTGCCAGAA...ATCATTGATGCAATGAAAGAAGATGAT---TTGTTGATGATTACTGCTGACCACGGGAATGACCCTTCATACGTAGGAACTGAC---.................................------------------CATACTCGTGAATATATTCCACTCGTAATTTTCTCTAAATCATTTAAAGAACCTAAAGTTTTACCTGTGGGACATTTTGCT
DEOB_BACST/257-366 ACAAAATCAAATATGGACGGAATGGACAAATTAGTAAATACGTTACAAATGAACTTTACAGGACTCAGCTTTTTGAATCTTGTTGATTTTGATGCACTATACGGTCATCGTCGCGACCCGAAGGGATATGGTGATGCGTTAGAAGAGTTCGATGCACGTTTGCCGGAA...GTGTTTGAACGTTTAAAAGAAGACGAT---TTATTAATCATTACAGCAGACCATGGAAACGACCCTGTTCATCACGGCACAGAT---.................................------------------CATACACGCGAATACGTACCGCTTCTTGTGTATAGCCCAAGCATGAACGGAGGTAAACAACTTCCATTGCGTGAAACGTTT
DEOB_BACSU/258-367 ACGGTTTCTAATATGGACGGAATGGACAAGGTGATCGATACGCTGGGAGAAGATTTTACGGGTCTGAGCTTTGCGAACCTTGTTGATTTTGACGCGTTATTCGGACACCGCCGTGACCCTGAAGGCTACGGACGCGCGCTTGAAGAATTTGATGCGCGGCTTCCGGAA...GTGTTTGGAAAAATGAGAGAAGACGAT---CTGTTAATTATTACAGCCGACCACGGCAATGATCCGATTCATCATGGGACTGAC---.................................------------------CATACACGCGAGTATGTGCCGATTCTGGCTTACAGCAAAAAACATAAGAAAGCCCAAATGCTGCCGCTTGCAGATACATTT
APGM2_METTH/267-375 TACCTGGACACAGACTACAGGGCCAAGGGCAGATACGCTGCCGGGGCCCTTGAGGAATATGACTTCCTCTACGTCCATGTTGAGGCACCCGAT---GAGGCAGGGCATGCCGGTGACGCTGAGGAGAAGATAAGGGCCATAGAGAATATAGACCGCTTCGTCCTCGGCaggTTACTTGATGCGCTCTCAGACCATGAGCACAGGATAGCGGTCCTCCCGGATCACCCCACA------CCCATTGAGATCAGGACC---.................................------------------CATGTACCCGACCCCGTACCATGCATCCTTGCAGGTGACGGCGTGGATGCTGATCAGGTGAAATCCTATGACGAGTTCACA
APGM2_ARCFU/253-361 TACATCGACACCAACTACAGGGGGCTTGTGAGGGAGACTGCGAGAGCACTGGAGGAGCATGATTTCGTTGTACTGCACACAGAGGGTATTGAT---GAGGTCGGACACGAGGGCGATGCTGAGCTGAAGGTTAGGGCGATTGAGCTTTACGACAGCAAAATTGTTGGAaagCTGCTGAACAAAGTTGATCTGGATGAGACAAGAATACTGCTCCTCCCAGACCATCCCACT------CCAGTTAAGGTGAAAACG---.................................------------------CACGTTGCTGAACCAGTCCCCTTTACTTTATACGGCAGGGGGAGAGATGAGGTTAAGGTTTACACGGAAAAAAGCTGCAGA
APGM_PYRHO/275-382 GAGTACAATACCAATGAGATGGCGAAGGCTAAGAAAGCCGTCGAGCTTCTCAAGGATTACGACTTCGTTTTCCTCCACTTCAAGCCAACCGAT---GCAGCGGGTCACGACAACAAGCCCAAACTTAAGGCCGAGCTAATAGAGAGGGCCGACAGAATGATAGGTTAC...ATCCTGGATCATGTGGATCTTGAAGAGGTAGTAATAGCGATAACAGGGGATCACTCCACG------CCGTGCGAAGTCATGAAC---.................................------------------CATAGCGGCGATCCCGTCCCGCTGTTAATAGCGGGTGGAGGGGTTAGAACTGATGACACTAAAAGGTTCGGGGAAAGGGAA
APGM1_METJA/274-381 ACACCGAAGACAAACTTCATGGGCAAAGCTAAAGCTTTAGTTGAGGCTTTAAAGGAGTATGATTTTGTTTTAGTGAATGTTAAAGGTGCTGAT---GAAGCAAGCCATGATGGTAACTATGAACTTAAAAAAGAAGTTTTGGAGAAAATAGATGAGATGCTTGCCTAT...GTATTTGAGCACATAAATAAGGATGAGGTTTATTTTGTTTTGACTGGAGACCATTCAACA------CCAATAGAGATGAAAGAC---.................................------------------CACTCAGCAGACCCTATTCCAATAGTTATCTGGGGAAAGAGTGTCAGAGTTGATGATGTTACAGAGTTTAACGAATTTGCA
APGM1_ARCFU/272-378 AACAAGAACACGAACCTTGAGGCAAAGGTTAAGGCGGCAATAAACGCCCTCGAAAGCTACGACGTTGTTCTGCTGCACATAAAAGCAACTGAC---GAACTCGGCCATGATGGAGATTTTGAGGGGAAGAAGGCCTTCATAGAGAAGCTTGACGAAAAGATAGCCCCA...CTG---CTCGACTTGGATTTCAGCAAGACCTGCCTCATTCTTACAGCAGACCACTCAACC------CCAATCAAGGTTAAGGAC---.................................------------------CACACCGCAGACCCGGTGCCTGTTGTAATCGTTCACGAGGATGTTAGAAGGGATGAGGTTAGCAGTTTCAGCGAGTTCGAG
APGM1_METTH/276-379 ATAGACACAGACCTTGAGAGCATAAAGAACGCCATATCCAGTGCAATTGCCGCTGATTACGATTTCCTCCTCATAAACATCGATGGTGCTGAT---GAGGCTGGACACGACGGCGACCTCGAGGGAAAGGTCCGTTTCATTGAGAGGGTCGACTCCATCCTCGGG---...---------GACCTGATGGGGGATGATATCTACTTCATACTAACGGCGGACCACTCAACA------CCTGTATCTGTCATGGAC---.................................------------------CACACAGGTGACCCTGTGCCCATCGCCATAACCGGGCCGGAGGTCCGTGTTGATGATGTCACATCCTTCAGTGAGAGGGCC
APGM2_METJA/273-378 GATTTTATAAAAATTGAGAGCTTTGAGGAAGGGATAGACTTAATTCCAGAGTTGGATTATGATTTCATCCATCTGCATACAAAAGAAACAGAT---GAAGCAGCTCACACTAAAAATCCATTAAATAAGGTTAAAGTCATTGAAAAGATTGATAAGCTTATAGGAAAT...------TTAAAGCTTAGGGAGGATGAT---TTACTGATAATAACTGCAGACCATTCAACT------CCCTCTGTAGGGAATTTA---.................................---------------ATCCATTCTGGAGAAAGTGTGCCAATCTTATTTTACGGCAAAAATGTTAGAGTTGATAATGTTAAAGAATTTAATGAAATAAGT
APGM_AQUAE/273-377 TTTGAGGGAAGTACCATACAGGACGAGATAGATACCTTAAAGAAGGTCTGGAACGAGTACGATTACTTCTTCGTCCACATAAAGAAGACCGAC---TCCTACGGTGAGGACGGGAATTACGAAGGAAAGGTAAGTGTAATTGAAGACTTTGACGCTCATCTTCCC---...------CAGTTTCTGGAATTAAAGCCAGACGTTCTGGCGATAACGGGGGACCACTCAACG------CCCTCTATATTAAAGGGA---.................................------------------CACTCTTGGCATCCGGTACCTCTCCTCATACACTCCCCTTACGTGCTGGGAGGAACTTCCGAGAGGTTCACCGAGAGAGAA