EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01668 alignment
(13 sequences with 216 bp)

`SSRP_SYNY3/9-77`	`AAAGTTGTC------AGCGATAATCGCCAGGCTCGTTTTCTGTACGAAATCTTAGAGACCTATGAGGCGGGCATCGAGCTGCAGGGTACTGAGGTCAAGTCAATTCGAGCA...GGGAAGGTTAATTTACGGGATGGTTTTGCTCTGCTGCGGGACGGGGAAGTCTGGTTGATGAACGTGCATATTTCGCCCTATGACAAAAGTAGTTTATTTTTT`
`SSRP_BACSU/7-74`	`AAAGTATTA------TCTCAAAATAAGAAAGCCAACCACGATTATTTTATAGAAGAAACCTATGAAACAGGCATCGTTCTGCAAGGAACCGAAATCAAATCGATTCGCGCC...GGCCGCGTAAACCTTAAGGATTCCTTCGCCAAAATCGAACGGGGAGAAGTGTTTCTCCACAATATGCACGTCAGCCCATATGAGCAGGGAAACCGC---TAT`
`SSRP_HELPY/2-70`	`AAACTCATT------GCCAGCAACAAAAAAGCCTATTTTGACTATGAAATTTTGGAAACTTTAGAAGCGGGATTAGCGCTTTTAGGCTCTGAAGTGAAGGCTTTGAGGCAA...ACTAGGGTGAATTTAAAGGATAATTTTGTTAAAATAATCAAGGGAGAAGCTTTTTTATTTGGTGTTCATATATCATATTTAGATACAATCCATGCGTATTAC`
`SSRP_AQUAE/6-76`	`AAAATTATCCCTATAGCTGAAAACAAGGAAGCAAAAGCCAAGTACGACATACTTGAGACCTACGAAGCGGGAATAGTCTTGAAAGGTTCCGAGGTAAAATCCCTGAGGGAAaagGGAACCGTTTCCTTTAAGGATAGTTTCGTAAGGATAGAAAACGGAGAGGCGTGGCTCTACAACCTCTACATAGCCCCGTATAAACACGCGACTATA---GAA`
`SSRP_MYCLE/10-77`	`CAGATTGTG------GCCACCAATCGCAAGGCTCGGCACGATTACGCAATCATTGAATTGTTTGAGGCTGGGGTGGCGTTGCTTGGCACCGAGGTGAAAAGTCTGCGGGAG...GGGCATGCGTCGCTGGCCGACGCGTTCGCAACCGTCGACAGCGGTGAAGTGTGGTTGCGAAACATGCACATCCCGGAGTATCAGCATGGTAGCTGG---ACC`
`SSRP_RICPR/6-73`	`AAAGTTATT------GTTCAAAATAAGAAAGCATTGTTCAATTATTTTATTGAAGAAATATTAGAAGCAGGTATTGTATTAAAGGGTAGTGAAGTACAGTCTCTTCGTCAA...GGTAAAGCTTCTATAGAAGAAAGTCACGCATCAGATAATGGACATGAAGTATTTTTGTATAATTGCCATATTACAGAATATGAAAAAGCGAATAGA---TTT`
`SSRP_BORBU/5-72`	`AATTTGCTT------CTTGAAAACAAAAAAGCAAAATTTAATTACTTTATTGAAGAGAAAATAAGTTGTGGAATAGTGCTAAAAGGAACTGAGGTAAAATCAATAAAGGCA...AAAAAATTATCATTTAACAATAGCTTTGCAAGCATAAAAAAAGAAGAATTGTGGCTTGAAAACTTGCACGTATCAAAATATAAAGAAGGTAATATC---TTC`
`SSRP_HAEIN/11-79`	`AATACTATC------GCACTAAATAAACGTGCAAGACACGATTATTTTATTGAAGATGAAATTGAAGCAGGTCTTGAATTACAAGGCTGGGAAGTCAAATCTATGCGCGCA...GGCAAGGCAAATATTAGTGATAGTTATGTTATTTTTAAAAATGGCGAAGCCTTTTTATTCGGCGCAAGCATTCAGCCATTAAATGTTGCATCAACGCATATT`
`SSRP_ECOLI/11-79`	`GCGACCATC------GCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCA...GGAAAAGCCAATATCAGCGACAGCTACGTCCTTCTGCGTGACGGAGAGGCATTTCTGTTTGGCGCTAACATCACGCCAATGGCCGTGGCCTCCACGCATGTG`
`SSRP_VIBCH/13-79`	`AACACTATC------GCGCTGAACAAAAAAGCTCGCCACGAATACTTCATCGAAGATGAATTTGAAGCCGGCATGGAGCTACAAGGCTGGGAAGTCAAATCACTTCGCCAA...GGTAAAGCCAACATTGCAGAAAGCTACGTCTACATCAAAGATGGCGAAGCGTTCATTTCCGGTATGACCATCATTCCGTTGCAGCAAGCCTCCACT------`
`SSRP_NEIMA/1-69`	`ATGGCTATT------GCGAACAATAAAAAAGCATTTCACGATTTTTTCATTGAAGACCGGATTGAAGCCGGTTTGGTCTTGGAAGGCTGGGAAGTCAAAGCAATCCGCGCC...GCGCGCGTACAGCTTAAAGAGAGTTATATCTATTGGAAAAAAGACGCGTTTTATCTGGTCGGCTGCCATATTACGGCTTTGCCCACAGCCTCGACACACATT`
`SSRP_MYCPN/2-69`	`CGAGTACTT------GTCAACAATCCCAGAGCGCAATATGACTATTACCTTTTAACGGGTTATTGTGCTGGCTTAGTCTTAAAAGGTAGTGAAGTCAAATCGCTAGCTTTA...GGGCAAGGTAGCTTAAAGGAAGCCTATGTTTTTATTGACAAGCACGAGGTCTATATTAAAGATTTTAGCATTTCGCCCTATGCCTTTTCAGGCGAG---TTC`
`SSRP_MYCGE/2-69`	`TTAATTCTT------GTTAACAATCCTAAGGCTAAATATGACTATCATTTAATGGAATCTTATTGTGCTGGAATAGTTTTAAAAGGAAGTGAAGTTAAAGCTTTAAGTTTA...GGTCAAGGTAGTTTAAAAGAAGCTTATGTTTTTGTTAAAAACAATGAGCTTTTTTTAGAACAGTTCACTATTCCACCTTATAGTTTTGCAGGTCCA---TTA`