EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01625 alignment
(16 sequences with 516 bp)


MSRAB_HAEIN/43-196 CGAGAAATTTATCTTGCTGGCGGCTGTTTTTGGGGTATGGAAGCATATATGGAGCGTATT---...------CACGGCGTGAAAGATGCGATTTCTGGCTATGCAAATGGTAATACGGAG..................AAAACCAGTTATCAGATGATTGGG------CTAACCGATCACGCAGAAACGGTAAAAGTTACTTACGATGCAAACCAAATTTCGTTAGATAAATTGCTTAAATATTATTTTAAAGTG...ATTGATCCAACCAGCGTAAATAAACAAGGTAACGACCGTGGCAGACAATATCGCACAGGGATTTATTATCAAGATGGAGCAGATAAAGCGGTGATCGGACAAGCACTCGCCCAGCTTCAAACCAAATATAAA---------------AAACCAGTACAAATTGAGGTGCAACCACTTAAAAATTACATCGTAGCAGAAGAATATCATCAGGATTATTTGAAGAAAAATCCAAATGGCTACTGCCATATTGATATTACC
MSRAB_HELPY/36-189 AGAGTGATTTACTTGGCTGGGGGGTGTTTTTGGGGGCTAGAGGCGTATATGGAGAGGATT---...------TATGGCGTCATAGACGCAAGCTCTGGTTACGCTAACGGCAAGACTTCA..................AGCACGAATTATGAGAAATTGCAT------GAAAGTGATCATGCTGAAAGCGTGAAAGTCATTTATGATCCTAAAAAAATCAGTTTGGACAAATTGTTGCGTTACTATTTTAAGGTG...GTTGATCCGGTGAGCGTGAACAAGCAGGGTAATGATGTGGGCAGGCAGTATCGCACGGGGATTTATTATGTCAATAGCGCGGATAAAGAAGTGATAGATCATGCCTTAAAAGCGTTACAGAAAGAAGTGAAA---------------GGTAAAATCGCTATTGAAGTAGAGCCTTTAAAAAATTATGTGAGGGCTGAAGAGTATCATCAGGATTATTTGAAGAAACACCCTAGTGGTTATTGCCATATTGATTTGAAA
MSAB1_STRPN/2-155 GCAGAAATTTATCTAGCAGGTGGTTGTTTTTGGGGCCTAGAGGAATATTTTTCACGCATT---...------TCTGGAGTGCTAGAAACCAGTGTTGGCTACGCTAATGGTCAAGTCGAA..................ACGACCAATTACCAGTTGCTCAAG------GAAACAGACCATGCAGAAACGGTCCAAGTGATTTACGATGAGAAGGAAGTGTCACTCAGAGAGATTTTACTTTATTATTTCCGAGTT...ATCGATCCTCTATCTATCAATCAACAAGGGAATGACCGTGGTCGCCAATATCGAACTGGGATTTATTATCAGGATGAAGCAGATTTGCCAGCTATCTAC---ACAGTGGTGCAGGAGCAGGAACGCATGCTG------------GGTCGAAAGATTGCAGTAGAAGTGGAGCAATTACGCCACTACATTCTGGCTGAAGACTACCACCAAGACTATCTCAGGAAGAATCCTTCAGGTTACTGTCATATCGATGTGACC
MSRA_MYCPN/2-157 AAACAAATCTATTTTGGTGGTGGCTGTTTTTGGGGTACCCAAAAGTATTTTGATCTGATT---...------AAGGGTGTCCAAAAGACCAGTGTGGGCTACCTCAATTCCAACATGAAA..................AATCCCACTTACGAACAAGTATGTAGTGGGCAGACCAACGCAGTGGAAGCAGTGTTCGTTGAATATGATGAAAACAAGGTAAGCTTAAACGAACTTATTGATGCTTTCTTTAAGGTC...ATTGATCCCACCATTAGAAACCGTCAGGGTAATGATATTGGTACCCAGTACCGTACCGGAGTTTATTGGGTAGATCCCCAAGACGAGCAGTTAATTACGCAAAAGTTTAGGGAACTACAGGCCAATTATCCA---------------AAACCAATTGTGACGGAAAACCGTGCAATGGAAAACTATTTTTTAGCAGAAGAGTACCACCAGGATTACTTAAAGAAAAATCCTCATGGTTACTGTCACATTAAATTTGAC
MSRA_MYCGE/2-157 AAAGAAATTTATTTTGGTGGTGGTTGTTTTTGAGGAATAGAAAAATATTTTCAACTTATT---...------AAGGGTGTTAAAAAAACATCTGTTGGTTATCTCAACTCTAGGATTAGA..................AATCCTAGTTATGAGCAGGTTTGTTCTGGTTATACTAATGCTGTTGAAGCTGTAAAAGTTGAATACGAAGAAAAAGAAATTTCTCTTTCAGAATTAATTGAAGCACTTTTTGAAGTT...ATTGATCCAACTATAAGAAATAGACAAGGTAATGATATTGGAACACAATATCGTACTGGTATTTATTGAACTGATAGCAGTGATGAAAAAATAATTAATGATAAGTTCTTAAAACTTCAAAAAAACTACAGT---------------AAACCAATTGTTACAGAAAATAAAAAAGTAGAAAATTATTATCTTGCTGAAGAATACCATCAGGATTATTTAAAAAAGAATCCAAACGGTTATTGCCACATCAAATTTGAC
MSRA_YEAST/17-180 AAATTAATCACATTAGCATGTGGATGTTTTTGGGGTACAGAACATATGTATAGGAAGTAT---...TTGAATGACCGTATAGTGGATTGTAAAGTAGGTTACGCTAATGGAGAAGAGTCTaaaaaggatagcccctctAGTGTCTCTTATAAGAGAGTTTGTGGTGGTGACACAGATTTTGCGGAGGTTTTACAAGTATCCTATAATCCCAAAGTGATAACTTTGAGAGAATTAACTGATTTCTTTTTTAGAATC...CATGATCCTACTACATCTAATTCACAAGGACCTGATAAAGGTACACAGTATCGCAGTGGATTGTTCGCTCATTCAGATGCTGATTTAAAAGAATTAGCCAAAATAAAGGAAGAATGGCAACCAAAATGGGGT---------------AATAAGATTGCCACAGTTATTGAACCAATCAAGAACTTTTACGATGCTGAAGAATACCACCAGTTATATTTAGATAAGAATCCACAGGGATATGCATGCCCTACTCATTAT
MSRA_ECOLI/43-203 GAGATTGCCATTTTTGCGATGGGTTGTTTCTGGGGTGTGGAGCGTCTGTTCTGGCAGTTA---...------CCCGGCGTTTACAGCACCGCCGCAGGCTATACCGGAGGCTATACGCCA..................AATCCGACTTATCGGGAAGTGTGCTCCGGTGATACGGGTCATGCCGAAGCGGTACGCATTGTTTACGATCCTTCCGTCATCAGCTATGAGCAGTTGCTACAGGTATTTTGGGAGAAT...CACGATCCCGCCCAGGGAATGCGTCAGGGCAATGACCACGGCACGCAGTATCGTTCAGCGATTTATCCGCTGACCCCAGAACAGGATGCCGCAGCTCGCGCCAGTCTGGAACGTTTTCAGGCGGCGATGCTTGCCGCCGATGATGATCGTCACATCACCACGGAAATCGCTAACGCCACACCGTTTTATTATGCCGAAGATGACCACCAGCAATATCTGCATAAAAACCCGTATGGTTACTGTGGAATTGGCGGAATT
MSRA_BOVIN/64-223 CAGATGGCTGTATTTGGAATGGGCTGTTTCTGGGGAGCTGAAAGGAAATTCTGGACCCTG---...------AAAGGTGTATATTCAACTCAAGTTGGTTTTGCAGGAGGCTATACTCCC..................AATCCTACTTATAAAGAAGTCTGCTCAGGAAAAACTGGCCACGCAGAAGTAGTCCGGGTGGTGTTCCAGCCAGAACACATCAGCTTTGAGGAACTGCTCAAGGTCTTCTGGGAGAAT...CATGACCCGACCCAAGGCATGCGCCAAGGCAATGACCACGGCTCTCAGTACCGCTCAGCCATCTACCCGACCTCTGCCGAGCACGTGGGGGCAGCCCTGAAGTCCAAGGAGGACTACCAGAAGGTTCTGTCGGAGCATGGTTTTGGG---CTGATCACCACGGACATCCGGGAGGGACAAACCTTTTACTATGCGGAAGATTACCACCAGCAGTACCTGAGCAAGGACCCCGACGGGTACTGCGGCCTCGGGGGCACC
MSRA1_SYNY3/49-208 GAAACGGCTCTGTTTGGTTTAGGCTGTTTTTGGGGAGCAGAACGCAAATTTTGGCAAATA---...------CCTGGAGTTTACAGCACCGCTGTTGGTTATGCGGCTGGTTATACCCCC..................AATCCCACTTACCAAGAAGTTTGTACGGGTATGACTGGCCATAACGAAGTGGTTTTAGTAGCCTTTGATCCCCAGCAAGTGAGTTACGACCAATTGCTCAAAGTCTTTTGGGAAAGC...CATAACCCTACCCAGGGCATGCGCCAGGGCAATGATGTGGGTACCCAATACCGCTCTGGCATTTACACCTATTCCGAAGCCCAACAACAGGCCGCTTTGGCATCGAAGCAAGCCTATCAGCAAGCTCTGCAACAGGCAGGCTACGGG---GAAATTACCACGGAAATTTTACCAGCCCCGGATTTTTATTACGCTGAAGACTATCACCAACAATATTTGGCGAAAAACCCCAATGGTTACTGCGGTTTGGGGGGCACT
MSRA_METTH/8-165 GAGAAGGCGACCTTCGGGGCCGGATGCTTCTGGGGGGTCGAGGACGCCTTCAGAAAGGTT---...------GATGGTGTTGTATCAACCCGTGTGGGATACATGGGGGGTCACCTTGAG..................AACCCCACATATGAGGATGTCTGCACCGGTCTTACAGGACACGCAGAGGTGGTTGAGGTAACCTTTGACCCTGATGTTGTGGGTTACAGCGACCTCCTTGATGTGTTCTGGAGCATA...CATGACCCGACGACCCTCAACAGGCAGGGCCCGGATGTGGGAGAGCAGTACCGCTCGGTCATATTCTACCACAGCGATGAGCAGCGAAGGGCTGCCATT---------GAGTCAAGAAGGAGACTTGAGGAGTCTGGAAGGTTCAGAGACAGGATAGTTACAGCCATTGAACCAGCAGGGACCTTTTATGAGGCCGAGGAGTACCACCAGCAGTACCTTGAGAAGAACCCCCGGAGGAGATGCTACCTCATGAGACTA
MSRA_MYCTU/5-158 CAGAAAGCGATCCTCGCCGGCGGCTGCTTTTGGGGGCTGCAGGATCTGATCCGCAACCAG---...------CCCGGTGTGGTCTCCACGCGGGTGGGCTACAGCGGCGGGAACATCCCC..................AACGCAACCTACCGTAACCACGGC---------ACG---CACGCCGAAGCCGTCGAAATCATCTTCGACCCCACGGTCACCGATTACCGCACCCTGCTGGAATTCTTCTTCCAGATC...CACGACCCGACAACCAAAGACCGGCAAGGTAACGACCGGGGGACCAGCTACCGGTCGGCCATCTTCTACTTCGATGAGCAGCAAAAGCGGATCGCGCTGGACACCATCGCCGATGTCGAGGCATCCGGCCTGTGGCCC---------GGCAAGGTGGTGACCGAGGTCAGCCCGGCCGGGGATTTCTGGGAAGCCGAACCCGAGCACCAGGACTACCTGCAGCGCTACCCCAACGGGTACACGTGCCACTTCGTCCGG
MSRA_PSEFL/6-159 GAAACTGCCATTCTCGCCGGCGGCTGCTTCTGGGGCATGCAGGATCTGCTGCGGCGCTAT---...------CCCGGTGTGCTGCACACGCGGGTCGGTTATACCGGCGGCGATGTGCCG..................AATGCCACCTATCGCAACCATGGC---------AAC---CACGCCGAAGCCATCGAGATCGTCTTCGACCCTGCCGTAATCAGCTACCGGCAGATCCTTGAGTTCTTCTTCCAGATA...CACGACCCCAGCACGCCCAACCGTCAGGGTAACGACCTGGGCCCCAGCTATCGTTCGGCGATCTACTACCTCAACGAACAGCAACGCGACATTGCCGAGGACACCGCTGCCGATGTCGATGCTTCACACCTGTGGCCA---------GGCCGAGTAGTCACCGAAATCGAACCAGCGGGGCCTTTTTGGGAGGCGGAACCAGAACACCAGGATTACCTCGAACGTATTCCGAACGGCTACACATGCCACTTCATCCGC
MSRA_SCHPO/2-163 CAGATTGCTATTATTGCTGCTGGTTGTTTTTGGGGAGTCCAAGAAGTGTATCTTAGAAAGTTCatcCCTGCAGCTGCCATTTTAAAAACTTCTGTAGGATATACGGGAGGAATCACTGCA..................GATCCTACATACAAAGAAGTTTGTACTAATACTACTAATCATGCGGAAGCCTTAAAGATTGAATTCGATGAAAAATTGACTAGTTACGATAAGATTATTGAATTTTTCTTTGCCATG...CACGATCCCACTACGTCTAATCAGCAGGGTAATGACATTGGTACTCAGTATCGTTCCGCAATCTTTACTACAAATCCTGAACAGGCAACCATTGCTAAAAGAGTCATGAACGAGGTGCAGGCAAAGCATTATCCTAAT---------AAGAAAATTGTAACCCAAATTCTTCCAGCTGGTAAATGGTGGGATGCCGAAGATTATCATCAGCTTTACCTTGAAAAAAATCCTGATGGGTACAGGTGCAGCTCACATTTT
MSRA_BACSU/6-163 GAAATCGCCACATTTGCAGGAGGCTGTTTTTGGTGTATGGTTAAACCTTTTGACGAACAG---...------CCGGGAATTGAAAAAGTGGTGTCCGGGTATACAGGCGGCCATACTGAA..................AACCCTACGTACGAAGAGGTGTGCAGTGAAACGACGGGACATCGTGAAGCCGTTCAAATCACGTTTCATCCTGATGTATTCCCTTATGAAAAACTGCTTGAATTATTTTGGCAGCAA...ATCGATCCGACAGATGCCGGAGGGCAATTTGCTGATCGCGGCAGTTCCTATCGCGCAGCCATTTTTTATCATAATGATAAACAAAAGGAGCTTGCGGAA---------GCTTCCAAGCAACGTCTGGCGGAAAGCGGCATCTTTAAAGATCCGATTGTAACGGACATTTTAAAAGCTGAACCTTTCTATGAAGCGGAAGGCTACCATCAGCATTTTTATAAAAAGAATCCAGCACATTATCAGCGCTACCGGACAGGT
MSRA2_SYNY3/37-195 GAAAAAGCCGTTTTTGCCGGGGGCTGTTTTTGGGGACTGGAGGCCATGTTTGAGGAAGTG---...------CGGGGTGTTAAGGATGTGCAAACCGGCTACAGCGGCGGCACTGAAGCC..................ACGGCCAACTATGCCAGGGTGAGTGGTGGCGGCACGGACCATGCGGAATCCATTGAAATTGTTTATGACCCCGCCCAGGTAAGTTACGGCGAACTGCTGAAAATTTTCTTTTCCGTCggcCATGACCCCACCCAAGTTAACCGCCAGGGCGTAGACCAGGGTCGTCAATATCGTTCGGCCATTTTTGCCACCACTCCTGAGCAAAAGCAGGTGGCCCAAGCTTACATTGACCAACTAGAGGAAAGTCAGGCCTTTGAC---------CAGGCGATCGCCACGGAGGTGAATGACTTTGATGCCTTTTATCCAGCGGAGGATTATCACCAGGATTTTGTCCAACGGAATCCGGCCCATCCCTATGTGTTGGTCCATGAT
MSRA_DROME/40-188 GCCACGGCCACTTTCGGCATGGGTTGCTTTTGGGGCGCAGAATCCCTGTATGGAGCCACC---...------CGTGGAGTTTTGAGAACCACCGTGGGGTACGCCGGAGGCAGCTCGGAT..................TTGCCAACGTACCGTAAAATGGGC---------GAT---CATACGGAGGTGCTGGAAATCGACTATGATCCCACGGTCATTAGCTTTAAGGAGCTGCTGGATCTGTTCTGGAACAAC...CATGAGTATGGCCTGACCACGCCC------ATCAAGAGG------CAGTACGCCTCCTTGATTCTGTACCACGATGAGGAGCAGAAGCAGGTGGCACACGCCTCCAAATTGGAGGAGCAAGAGCGCCGTGCACCG------------GAGATCATAACCACTGAGATTGCATCCAAGGAGAACTTTTACCCAGCCGAGGCGTACCACCAGAAGTATAGGTTGCAGGGCCACAAGGATCTCGCCTCATCGCTAAATCTC