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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF01623 - Carla_C4) |
| Carlavirus putative nucleic acid binding protein |
| (Pfam reference: accession no. PF01623) |
| (Interpro reference: accession no. IPR002568) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
10 sequences @ 95 aa (ave. pairwise identity: 0.43) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 5.21) |
| nucleotides (available for above) |
10 sequences @ 285 bp (ave. pairwise identity: 0.47) |
New Hampshire format (total tree length: 4.41) |
|
amino acids, restricted set (corresp. to available nt seqs) |
10 sequences @ 95 aa (ave. pairwise identity: 0.43) |
New Hampshire format (total tree length: 5.21) |