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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01619 alignment
(14 sequences with 407 aa)


PROD_HUMAN/143-498 DDGFIAIKLTALGRPQFLLQFSEVLAKWRCFFHQMAVEQGQAGLAAMDTKLE.VAVLQESVAKLGIA.SRAEIEDWFTAETLGVSGTMDLLDWSSLIDSRTKLS...........KHLVVPNAQTGQLEPLLSRF-----TEEEEL---QMTRMLQRMDVLAKKATEMGVRLMVDAEQTYFQPAI---.-.SRLTLE.-MQRKFNVEKPLIFNTYQCYLKDAYDNVTLDVELARREGWC....FGAKLVRGAYLAQERARAAEIGYEDPINPTYEATNAMYHRCLDYVLEELKHN.......AKAKVMVASHNEDTVRFALRRMEELG.LHPADHQVYFGQLLGMCDQISFPLGQAG-------YPVYKYVPYGPV---MEVLPYLSRRALENSSLMKGTHRERQLL
PROD_DROME/289-645 GTGITAIKLTALGRPQLLLQLSEVIMRTRKYMEDMVGGQGNV-LTHHKT---.IKDLEKYYATLG--.DNKDVKEFLNNVTSDKEGILHLFPWSGIVDEDSQLS...........DTFRVPDPQTGQMRRLISQI-----PPKEEE---MFRNMIRRLNTIVKAAADLDVRIMVDAEQTYFQPAI---.-.SRITLE.-MMRKYNKDKAIVFNTYQCYLRETFREVNTDLEQAKRQNFY....FGAKLVRGAYMDQERDRAKSLGYPDPVNPTFEATTDMYHRTLSECLRRIKLMkdcdddaRKIGIMVASHNEDTVRFAIQQMKEIG.ISPEDKVICFGQLLGMCDYITFPLGQAG-------YSAYKYIPYGPV---EEVLPYLSRRAQENKGVLKKIKKEKRLL
PROD_ARATH/138-486 AAERVRSVYEATG---LKGMLVYGVEHADDAVSCDDNMQQFIRTIEAAKSLP.TSHFSSVVVKIT--.-------AICPISL-LKRVSDLLRWEYKSPNFKLSW...........KLKSFP-VFSESSPLYHTNSEPEPLTAEEER---ELEAAHGRIQEICRKCQESNVPLLIDAEDTILQPAIDYMaYsSAIMFN.-----ADKDRPIVYNTIQAYLRDAGERLHLAVQNAEKENVP....MGFKLVRGAYMSSEASLADSLGCKSPVHDTIQDTHSCYNDCMTFLMEKASNG.......SGFGVVLATHNADSGRLASRKASDLG.IDKQNGKIEFAQLYGMSDALSFGLKRAG-------FNVSKYMPFGPV---ATAIPYLLRRAYENRGMMATGAHDRQLM
PUT1_YEAST/113-464 CGGENFKEVIECGKRLQKRGISNMMLSLTIENSEGTKSLSSTPVDQIVKETIsSVHNILLPNIIG--.-----QLESKPINDIAPGYIALKPSALVDNPHEVLY...........N-FSNPAYKAQRDQLIENCS-----KITKEIFELNQSLLKKYPERKAPFMVSTIDAEKYDLQENGVYELQ---.-.RILFQK.--FNPTSSKLISCVGTWQLYLRDSGDHILHELKLAQENGYK....LGLKLVRGAYIHSEKNRNQ--IIFGDKTGTDENYDRIITQVVNDLIINGEDS.......YFGHLVVASHNYQSQMLVTNLLKSTQdNSYAKSNIVLGQLLGMADNVTYDLITNHG-----AKNIIKYVPWGPP---LETKDYLLRRLQENGDAVRSDNGWPLIK
O50444_MYCTU/8-320 TLRPAMLAAGRSDRLGRIVERSPLTRGVVRRFVPGDTLDDVVDIVTALR---.DSGRYLSIDYLG--.------ENVTDADDAAAAVRAYLGLLDVLGRRGDIA...........CDGVRP------LEVSLKLS-----ALGQALDRDGQKIALDNARAICERAERVGAWVTVDAEDHTTTDST---.-.LSISGD.-----LRVDFPWLGTVVQAYLRRTLADCAELAAVGAR----....--VRLCKGAYDEPAS-----------VAYRDAAQVTDSYLRCLRVLTAGR--.......--GYPMVATHDPVIIAAVPGITRESG.RSQ--GDFEYQMLYGVRDDEQRRLTGAG-------NHVRVYVPFG-----TRWYGYFLRRLAERPANLAFFLRALTDR
P94390_BACSU/2-303 ITRDFFLFLSKSG-FLNKMARNWGSRVAAGKIIGGNDFNSSIPTIRQLN---.SQGLSVTVDHLG--.------EFVNSAEVARERTEECIQTIATIADQELN-...........------------SHVSLKMT-----SLGLDI---DMDLVYENMTKILQTAEKHKIMVTIDMEDEVRCQKT---.-.LDIFKD.-----FRKKYEHVSTVLQAYLYRTEKDIDDLDSLNP-----....-FLRLVKGAYKESEK--------V---AFPEKSDVDENYKKIIRKQLLNG--.......--HYTAIATHDDKMIDFTKQLAKEHG.IAN--DKFEFQMLYGMRSQTQLSLVKEG-------YNMRVYLPYG-----EDWYGYFMRRLAERPSNIAFAFKGMTKK
O32179_BACSU/1-302 MLRHVFLFLSQNK-TLTKFAKAYGTRLGARRFVAGDTIESAVKTVKRLN---.RSGLCATIDYLG--.------EYAASEKEANQVAEECKKAIQAIAEHQLN-...........------------SELSLKLT-----SIGLDL---SEELALTHLRAILSVAKQYDVAVTIDMEDYSHYEQT---.-.LSIYRQ.-----CKQEFEKLGTVIQAYLYRAAEDIRKMRDLKP-----....-NLRLVKGAYKESAA--------V---AFPDKRGTDLHFQSLIKLQLLSG--.......--NYTAVATHDDDIIAFTKQLVAEHQ.IPA--SQFEFQMLYGIRPERQKELAKEG-------YRMRVYVPYG-----TDWFSYFMRRIAERPANAAFVLKGILKK
P74275_SYNY3/96-447 KKLLNFADAHSTPAQIAAGTVSKATEQLAFKYIAGETIAQVIKTVERLR---.KEKMGFTIDLLG--.------EAVITESEAAEYWQNYLDLMAQLSQQAKSWskvpqidqadgEILPQVQVSVKLTAFYSQFD-----PLDPAG---SKAKVCERIRELLRRAQELGVAVHFDMEQYHYKDLI---.-.LNILKE.LLVEEEFRSRTDVGITMQAYLRDSTEDLEALIPWAKHRGYP....VTVRLVKGAYWDQETIKAQQN-HWQIPVYVEKAQTDANYERMTRLLLENHEY.......--LYAAIGSHNVRSQALACAIAEELN.IPK--RRYEMQILYGMGEPLARAIVKRG-------HRVRVYAPYGRL---LPGMAYLIRRLLENTANSSFLRQNLEER
Q59206_BRAJA/136-475 PDGTIGRLVKRLGAPAVRTATRQAMRLMGNHFVLGETIEQALERGKPRS---.GQKTRYSFDMLG--.------EGARTAADARRYFDAYASAIETIGKAAGNH...........ALPDRPGISVKLSALHPRFE-----AISRAR---VMVELVPQLLDLAQRGKAHDLNFTVDAEEADRLELS---.-.LDVIAA.TLADPSLKGWDGFGLAIQAYQKRASAVIDYVDALARAHDRK....LMVRLVKGAYWDTEIKRAQERGLDGYPVFTRKAMTDLNYVACASKLLALRPR.......--IFPQFATHNALTVATVLEMAEGS-.-----SGFEFQRLHGMGEALYEQLAKDHADI-----AYRTYAPVGSH---RDLLAYLVRRLLENGANSSFVAQAADYR
Q52711_RHOCA/136-473 IAGTLRGAMRRLGEPVIRAAVGQAMREMGRQFVLGETIEKALERAEKRE---.AEGYTFSYDMLG--.------EAALTAADAERYRLAYAQAITAIGKAATRG...........SIAANPGISIKLSALHPRYE-----VAQEAR---VMAELVPVVRDLARAAARAGIALHIDAEEQDRLALS---.-.LRVMAA.VIADPETAGWEGFGAVVQAYGKRAGAAIDALAAMARAAGRR....INIRLVKGAYWDAEMKRAQVEGHPGFPLFTSKTGTDVAYICLAAKLFGLNDC.......--IYPQFATHNAHTVAAVLEMAAG--.-----RPFEFQRLHGMGARLHDIVLRETGG------RCRIYAPVGAH---RDLLAYLVRRLLENGANSSFVNQIVNES
Q59426_ECOLI/226-571 LSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAQALANARKLE---.EKGFRYSYDMLG--.------ERALTAADAQAYMVSYQQAIHAIGKASNGR...........GIYEGPASRLSCPPCIHAIA-----RAIRS----GMEELYPRLKSLTLLARQSTLGLNIDVRKRRIVWRS---.-.RSICWKnSASNPNWRAGTGIGFVIQAYQKRCPLVIVYLVDLASRSRRP....VMIRLVKGAYWDSEINARKWKGWRLSGLYPQSVYR-CLLSGLREKTARRPNL.......--IYPQFASHNAHTLAAIYHLAGQNY.YP---GQYEFQCLHGMGEPLYEQVTGKVAD-GKLNRPCRIYAPVGTH---ETLLAYLVRRLLENGANTSFVNRIADAT
PUTA_ECOLI/228-574 LSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLE---.EKGFRYSYDMLG--.------EAALTAADAQAYMVSYQQAIHAIGKASNGR...........GIYEGPGISIKLSALHPRYS-----RAQYDR---VMEELYPRLKSLTLLARQYDIGINIDAEESDRLEIS---.-.LDLLEK.LCFEPELAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRR....LMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNL.......--IYPQFATHNAHTLAAIYQLAGQNY.YP---GQYEFQCLHGMGEPLYEQVTGKVAD-GKLNRPCRIYAPVGTH---ETLLAYLVRRLLENGANTSFVNRIADTS
Q44334_9RHIZ/166-509 LSAALTKLIARAGEPVIRRGVDMAMRMMGDQFVTGETIGEAIKRSKPLE---.EQGFQYSYDMLG--.------EAATTAKDAERYYKDYENAIHAIGKASAGR...........GIYGGPGISIKLSALHPRYA-----RVQAER---VMAELLPRVKSLMLLSKKYDIGLNIDAEEADRLELS---.-.LDLLEE.LALDKDLAGWNGLGFVVQAYGRRCPFVLDYIIDLAQRAGRR....IMVRLVKGAYWDAEIKRAQVDGLEDFPVFTRKVHTDVSYIACARKLLAARDV.......--VFPQFATHNAQSMATIYHLAGPDF.KL---GDYEFQCLHGMGEPLYSEVVGKK----KLDRPCRFYAPVGTH---ETLLAYLVRRLLENGANSSFVNRIADPA
O24897_HELPY/87-428 LLMGFLSFGKMLPDMSVPFFVNKIRSDTKAMVLDQEESQLKERILKRKN---.-EKIILNVNFIG--.------EEVLGEEEANARFEKYSQALKSNYIQYIS-...........--IKITTIFSQINILDFEYS-----KKEIVK----RLDALYALALEEEKKQGMPKFINLDMEEFRDLELT---.-.VESFME.----SIAKFDLNAGIVLQAYIPDSYEYLKKLHAFSKERVLKglkpIKIRFVKGANMESEETIASVK-DWALPTFSNKQDTDSNYNKMLDFVLEGDNY.......KYIHIGAASHNIFEIAYVYTRIHAIN.DPVVLEHFSFEMLEGMSLQASQELKEMH--------KLILYAPVCDEAHFNNAIAYLVRRLDENTSSDNFMKAFFNLK