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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01614 alignment
(23 sequences with 205 aa)


O06806_MYCTU/73-247 FALGERLLGFGSVTG--AHIAAAFRPTVERVARATDgETVDLSVLR--GQRMWFVDQIES.-----SYRLRAVSAVGLRFPLNGTANGKAALAAL-DDADAEAALCR--------LDPMVA--EGLRREIVEIRRT.GIAFDRNEHTPGIS-AAAIARRA...LGDNVIAISVPAPTARFLEKEQRI----IAALRAAADSPDWT
P71977_MYCTU/71-255 YRLGPEITRMATTVR--LGVVTEMHPFLTELSRELD.ETVDLSILD--GDRADVVDQVVP.-----PQRLRAVSAVGESFPLYCCANGKALLAALPPERQARALPSR----LAPLTANTITDRAALRDELNRIRVD.GVAYDREEQTEGICAVGAVLRG-...VSVELVAVSVPVPAQRFYGREAELAGALLAWVSKVDAWFNGT
P70766_NOCSI/84-269 YRLGPHAPTLTGRPGEHQEVRVAASPYLNELHALTG.AVAHLSVLE--GDRVHYLDKIG-.----GSAARAVPSRVGARLLASDTVSGRALLACR-SPEYVDDVLGP---------RLPAPRLALLHRDLAAARQRrGVVHAPADPTTGIASIAAPVLGPhgaVAAISLALPGELPPARLAPLLLNQAHRIAGVLFPQRRLHGRS
O53238_MYCTU/62-232 WRLGPAITELATHVD--DPLLVACAAVLPQLRDATG.ESVQVYRRE--GTSRVCVAALEP.--AAG-LRDTVP--VGARLPMTAGSGAKVLLAHT-DAATQAAVLPK----------AVFS-----ARALAEVCRR.GWAQSVAEREPGVASVSAPVRDG...RGVVIAAISVSGPIDRMGRRPGVR---WAADLLSAADALTRR
POBR_ACIAD/79-270 FWLTHRVLRFSSSYLSSAHLPKVAQSFLNLLCAQTS.LTFSIVVLD--EHEVVPVARSYLpQ-QDNLRVSPYGMHLGNRLPAHATSTGKVLLSVL-DREVQIEWIEK--YGLKRLTPYTITDEHTFLETLDAVRQS.DYCLSTEEHELGLIAIAVPVLNA...QGLTIAALNCMSQTNRVQPQYLIDQ--VLPLLRNTANELRNL
PCAU_ACIAD/87-277 FYLTPKILKFSGSYLGGAQLPKISQPLLNLLTTQTS.LIYSVMVLD--GYEAITIARSAAhQ-QTD-RVNPYGLHLGNRLPAHATSAGKILLAYL-DDHAQQEWLNQ--YPLQRLTKYTYTNNIDFLRLLSEIKEQ.GWCYSSEEHELGVHALAVPIYGQ...QSRVVAALNIVSPTMRTTKEYLIQH--ILPLLQETARELRNI
PCAR_PSEPU/101-288 YSLLPKVLTLGHAYLSSTPLAISAQPYLDRISDQLH.EAANMATLE--GDDILYIAR---.-SATVERLISVDLSVGGRLPAYCTSMGRILLAAM-DDTSLREYLGR--ADLKARTSRTLHDPESLFACIQQVRAQ.GWCVVDQELEQGLRSIAVPIYDA...SGQVLAALNVSTHVGRVTRSELEQR--FLPILLAASRDLCHQ
O67983_RHOOP/73-259 FWLTPRVLELGYSYLSSLSLPEVAQPHLERLSHKVH.ESSSVSILD--GADIVYVAR---.--VPVSRIMTVGITIGTRLPAYATSMGRVLLAGL-PDDELDAYLEK--LDIQRLTERTITARDDLKAAILAVRAD.GICVLDQELEAGLRSMAAPIRNA...SGLTVAAVNISTPAARYSLEDLHSD--LIPSLRVTATDIEQD
O33539_RHOOP/65-251 WSLTPRVLSIGQHYSESHALIEAAMPRLLEVAEKTQ.ESASLGVLD--GADVVYAARVP-.----VRRIMSINVSVGTRVPAYATSMGRALLAWAPADVVEQVVAES---TFEKLGPETISTAAELDKELAKVREQ.GFALTSEELEKGLISLPAPVRDA...GGTVVGVVACSTSSARNTPAQFREQ--AVPCVLAAAAALSTD
O66964_AQUAE/67-252 YRLGIKNFELGVSYLKHLDIKKASKPILEEVAKKVK.ENVYLTTRV--SYEVLYIEKSE-.----VEREVMILSRYGRVLPLYASASGKIYLSHF-DEKELENYFKT--VKWVRHTPHTKT-PEELLKELPKIRKE.GYALNLEEYEEEVVSAAAPVYDY...AGKVNYTVTIVAPSYRMTKEDLTG--WVKEILKESAQKISVK
KIPR_BACSU/61-246 YSLGLVFLEFGQLVADRLDIRKIAKPVMEELCREVD.EAVQLIMRD--GNEAIYVEKIEG.-----TQTVRLYTAIGRRSPLYAGACARSILSFL-PREEIEAYIKQ--TELISIGSGTITDPEKLLQEIDASVQN.GYTVSYSELENYTAAIGAPIFNH...ERQVAAGISIAGFEARFTEDRLPY---LTEKVKDAALQISRK
YIAJ_HAEIN/73-262 YRLTIKCLSIGQKVLSSMNIIHVASPYLEQLNLKLG.ETINFSKRE--DDHAIMIYKLEP.--TNGMLKTRAY--IGQYLKLYCSAMGKIFLAYEKKVDYLSHYWQSHQREIKKLTRYTITELDDIKLELETIRQT.AYAMDREENELGVTCIACPIFDS...FGQVEYAISVSMSIYRLNKFGTDA---FLQEIRKTAEQISLE
YIAJ_ECOLI/81-269 YRLTTKFIAVGQKALSSLNIIHIAAPHLEALNIATG.ETINFSSRE--DDHAILIYKLEP.--TTGMLRTRAY--IGQHMPLYCSAMGKIYMAFG-HPDYVKSYWESHQHEIQPLTRNTITELPAMFDELAHIRES.GAAMDREENELGVSCIAVPVFDI...HGRVPYAVSISLSTSRLKQVGEKN---LLKPLRETAQAISNE
YFAX_ECOLI/63-248 FCLWTRLVELSGHALSKMDLRELARPRLTQLMDTTG.LLCHLGIID--NGSAYYILKVE-.---SS-ATISVRSHEGKSLSLYRSGIGKCLLAWQ-PAAVQQSIIEG--LVWEQATPTTITHPQQLHEELARIRRQ.GWSYDNGEDYADVRCVAAPVFNA...NNELTAAISVVGTRLQINEEYRDY---LAGKAIACARDISRL
YJHI_ECOLI/62-248 YSLGIKNYELGCQALHRQNIFEVTKRPMQELSLKSG.LVCHLGAME--SISAIYLDKIES.----PDSVPTSKSWIGKKLELHITALGKALLAWK-TREELDYFLEA--LTLTPHTRNTFTDKKLFLEELQKTRLR.GWAIDNEESTYGAVCLSMPVFNM...YNRVNYAISLSGDPVVYSGNKIDS---YLELLRKCAEQISYG
YAGI_ECOLI/62-247 YRLGMKLVERGHFVVGSIDIRQKAKGWLTELSRRTG.QTTHLGILD--GREGVYIEKIE-.----GKLAAIAYSRIGRRLPVHATAIGKVLIAWL-GEAELNALLEG--YQYTTFTPATLASREALMSALAQTREQ.GYALDSEENEQGVRCVAVPVWNH...ESRVIAALSLSTLTSRVDDAELAN---FREQLQQAGLALSRA
KDGR_ECOLI/70-255 YSLTLKLFELGARALQNVDLIRSADIQMRELSRLTK.ETIHLGALD--EDSIVYIHKID-.----SMYNLRMYSRIGRRNPLYSTAIGKVLLAWR-DRDEVKQILEG--VEYKRSTERTITSTEALLPVLDQVREQ.GYGEDNEEQEEGLRCIAVPVFDR...FGVVIAGLSISFPTLRFSEERLQE---YVAMLHTAARKISAQ
ALLR_ECOLI/79-264 WHIGLGVFNVGAAYIHNRDVLSVAGPFMRRLMLLSG.ETVNVAIRN--GNEAVLIGQLEC.--K-SMVRMCAP--LGSRLPLHASGAGKALLYPL-AEEELMSIILQ--TGLQQFTPTTLVDMPTLLKDLEQAREL.GYTVDKEEHVVGLNCIASAIYDD...VGSVVAAISISGPSSRLTEDRFVS---QGELVRDTARDISTA
ICLR_ECOLI/82-269 WAIGAHAFMVGSSFLQSRNLLAIVHPILRNLMEESG.ETVNMAVLDQSDHEAIIIDQVQC.--T-HLMRMSAP--IGGKLPMHASGAGKAFLAQL-SEEQVTKLLHR--KGLHAYTHATLVSPVHLKEDLAQTRKR.GYSFDDEEHALGLRCLAACIFDE...HREPFAAISISGPISRITDDRVTE---FGAMVIKAAKEVTLA
GYLR_STRGR/63-248 YQLGAELLALGNSYLDVHELRARALVWTDDLARSSG.EAAYLGVLHQQGVLIVHHVFRP-.------DDSRQVLEVGAMHPLHSTAHGKVISAFD--PVAHSEVLEG---DRATLTGRTVTEAAAFEEVLDLTRAR.GWALDLEETWEGVASLAAPVHDR...RRMAVGAVGVTGPVERLCPDGAPAT-ELVTAVRDCAAAVSRD
GYLR_STRCO/63-248 YQLGAELLRLGTTYLDVHELRARALVWTDDLARSSG.ESVHLGVLHQQGVLIVHHVFRP-.------DDSRQVLEIGAMQPLHSTALGKVLSAYD--PVAHSEALEA---DRKAFTDRTVCEPDSFEHVLDITRAR.GYAADVEETWEGIASIAAPIHDR...RRMPVGAVGITGAVERLCREGELRP-ELVAAVRDCARAVSRD
O24845_ACIAD/80-268 YALDSKVMELGFNSLSKLSLLDLSTPLMKELRDQTK.IAVHLSILE--GTHIVFVNNIQ-.----SSGPFTSTISLGTRWPAHATVIGQLLLSNLSETEIRQRYRKF--DEWDTFSELTPKNLKELLLRLNYVKTQ.PSMVSWGHYNNDMAACAAPIYRQ..sSKDMVAVLSVSCPITTYDEYTFKHS--VAAQVIETADKISKF
Q48293_HALSA/1-190 MQLGDWFVPVSNYARNSTDLYRLGREEIDKLATQTR.HTAHLVTES-DGRQIVLYESMGE.---ESVTTEYHLRMRETPRKLHTSAAGKSILAFL-PEGRRETLISE--IEFGTESSTPIGSPDALREQLATVRDQ.GYAINDEEEIHGIRSIGAPIRGR...TEDVAGAVSVTAPKTRLQNAEFAG--EVPALVMEAANIIEVR