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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01582 phylogeny
for nucleotide alignment


 
(((O81430_ARATH/45-176,((O23532_ARATH/14-144,O04264_ARATH/14-148),O49468_ARATH/13-143)),O82500_ARATH/13-143),((O65506_ARATH/52-182,Q9ZSN4_ARATH/83-213),Q9ZVX6_ARATH/14-144),(((((((MYD88_MOUSE/163-292,((((IL1R_HUMAN/387-537,((IRL2_HUMAN/385-535,IRL2_RAT/388-538),Q90874_CHICK/390-539)),(IRL1_MOUSE/384-539,(O95256_HUMAN/410-558,Q9Z2B1_MOUSE/409-557))),IL1AP_HUMAN/407-545),IR18_HUMAN/377-519)),(((TLR3_HUMAN/758-896,(TLR2_HUMAN/643-781,TLR1_HUMAN/639-775)),TLR4_HUMAN/676-814),TLR5_HUMAN/695-835)),(((Q24591_DROME/1047-1179,Q26477_SCHAM/19-153),TOLL_DROME/861-992),Q9VIA4_DROME/574-704)),O49468_ARATH/535-662),((((O81747_ARATH/244-388,O81747_ARATH/577-711),O81747_ARATH/11-152),((((O49419_ARATH/511-641,O49419_ARATH/302-431),O49419_ARATH/12-143),((O65507_ARATH/21-150,(O80617_ARATH/9-138,O80754_ARATH/17-146)),O48573_ARATH/14-142)),O49471_ARATH/17-144)),(O49469_ARATH/26-157,(P93244_LINUS/78-210,Q40253_LINUS/63-195)))),(TMVRN_NICGU/14-147,Q9ZS31_SOLTU/22-158)),O49470_ARATH/1374-1500));
(((O81430_ARATH/45-176:0.27252,((O23532_ARATH/14-144:0.08483,O04264_ARATH/14-148:0.04221):0.03484,O49468_ARATH/13-143:0.14626):0.16019):0.06407,O82500_ARATH/13-143:0.22240):0.02019,((O65506_ARATH/52-182:0.23833,Q9ZSN4_ARATH/83-213:0.15162):0.10396,Q9ZVX6_ARATH/14-144:0.23643):0.02950,(((((((MYD88_MOUSE/163-292:0.81084,((((IL1R_HUMAN/387-537:0.20130,((IRL2_HUMAN/385-535:0.11188,IRL2_RAT/388-538:0.10258):0.17726,Q90874_CHICK/390-539:0.24509):0.00000):0.35404,(IRL1_MOUSE/384-539:0.47831,(O95256_HUMAN/410-558:0.11152,Q9Z2B1_MOUSE/409-557:0.08737):0.48338):0.00000):0.09519,IL1AP_HUMAN/407-545:0.45740):0.07113,IR18_HUMAN/377-519:0.37482):0.19901):0.23446,(((TLR3_HUMAN/758-896:0.91586,(TLR2_HUMAN/643-781:0.26070,TLR1_HUMAN/639-775:0.27204):0.17599):0.08535,TLR4_HUMAN/676-814:0.42924):0.00000,TLR5_HUMAN/695-835:0.66193):0.18700):0.04292,(((Q24591_DROME/1047-1179:0.31807,Q26477_SCHAM/19-153:0.28842):0.30044,TOLL_DROME/861-992:0.26297):0.13014,Q9VIA4_DROME/574-704:0.38348):0.21759):0.79440,O49468_ARATH/535-662:0.57240):0.11492,((((O81747_ARATH/244-388:0.19588,O81747_ARATH/577-711:0.31707):0.18805,O81747_ARATH/11-152:0.36491):0.13962,((((O49419_ARATH/511-641:0.33665,O49419_ARATH/302-431:0.13519):0.08069,O49419_ARATH/12-143:0.24903):0.21912,((O65507_ARATH/21-150:0.22377,(O80617_ARATH/9-138:0.17912,O80754_ARATH/17-146:0.19578):0.10536):0.01598,O48573_ARATH/14-142:0.35136):0.03046):0.03725,O49471_ARATH/17-144:0.27024):0.04019):0.23037,(O49469_ARATH/26-157:0.27911,(P93244_LINUS/78-210:0.13493,Q40253_LINUS/63-195:0.10073):0.38822):0.11730):0.06430):0.03946,(TMVRN_NICGU/14-147:0.12610,Q9ZS31_SOLTU/22-158:0.11973):0.21426):0.17916,O49470_ARATH/1374-1500:0.26901):0.05911);