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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF01577 - Poty_P1)
Potyvirus P1 protease
(Pfam reference: accession no. PF01577)
(Interpro reference: accession no. IPR002540)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
26 sequences @ 263 aa
(ave. pairwise identity: 0.19)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 25.98)
nucleotides
(available for above)
26 sequences @ 789 bp
(ave. pairwise identity: 0.35)
New Hampshire format
(total tree length: 35.59)
amino acids, restricted set
(corresp. to available nt seqs)
26 sequences @ 263 aa
(ave. pairwise identity: 0.19)
New Hampshire format
(total tree length: 25.98)