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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01569 phylogeny
for nucleotide alignment


 
(((((YNBD_ECOLI/82-202,((Q9SVK7_ARATH/73-191,(((Q19403_CAEEL/128-286,O26889_METTH/59-174),((((PGPB_ECOLI/73-235,PGPB_HAEIN/75-237),((((O59344_PYRHO/74-184,Q9V1B5_PYRAB/75-185),Y662_METJA/106-213),Q9X361_BACAN/51-170),((Y374_METJA/211-328,O67603_AQUAE/54-171),(Q9ZC96_RICPR/79-202,(YJN4_YEAST/109-238,YK33_YEAST/110-239))))),(CAX4_YEAST/59-187,O59747_SCHPO/436-558)),((((Q06074_BACME/88-209,Q55398_SYNY3/115-233),O07387_LACLC/88-212),O25522_HELPY/100-222),O34349_BACSU/77-199))),((((((Q9Y744_EMENI/211-357,Q9Y745_ASPFU/211-357),AUR1_SCHPO/176-322),((Q9Y7A0_CANTR/188-334,(AUR1_CANAL/189-335,Q9Y799_CANPA/192-338)),((AUR1_YEAST/176-322,Q9Y797_CANGA/177-323),Q9Y798_ISSOR/184-331))),Q9Y7A1_CRYNE/194-340),((((((LPP2_HUMAN/98-248,LPP1_MOUSE/101-251),(Q9TXU1_CAEEL/112-266,((((Q9VNU1_DROME/107-266,(Q9VNU2_DROME/65-225,Q9VNT9_DROME/134-293)),WUN_DROME/192-351),Q9VNT8_DROME/100-263),Q9VNU0_DROME/113-276))),YSX3_CAEEL/125-278),(O75043_HUMAN/22-175,Q22250_CAEEL/146-301)),((DPP1_YEAST/99-251,Q9UUA6_SCHPO/92-244),(LPP2_ARATH/99-249,LPP1_ARATH/124-273))),Q9ZJ31_HELPJ/56-174)),Q9SUW4_ARATH/65-209))),(Q9ZN40_HELPJ/78-191,(Q56264_TREDE/64-202,O83562_TREPA/53-211)))),((((YC02_KLEPN/35-151,Q9X647_AERHY/35-151),((Q9RUM9_DEIRA/115-233,((Q9RHY7_CORAM/39-161,O07235_MYCTU/90-210),O86624_STRCO/91-211)),((O86625_STRCO/65-183,((Q9ZC02_STRCO/76-194,(P72262_RHOER/62-180,P72269_RHOER/62-180)),O53584_MYCTU/48-161)),O86825_STRCO/103-221))),((YWOA_BACSU/52-168,BCRC_BACLI/57-174),((O30906_SALTY/60-177,YBJG_ECOLI/56-173),O87756_KLEPN/59-176))),((PPA_ZYMMO/108-234,PHON_SALTY/105-225),(((O82433_FUCDI/437-633,Q7X9V0_9PHAE/386-599),Q8LLW7_COROI/376-581),(Q89ER7_BRAJA/257-413,(((Q7UVW2_RHOBA/451-626,Q8YZ15_ANASP/267-431),Q82PX4_STRAW/286-433),(PRXC_CURIN/329-526,P79087_9PLEO/325-529))))))),Q46511_DESMO/59-171),(Q9Z186_MOUSE/53-202,G6PT_HAPNU/53-200)),G6PT_RAT/57-204,G6PT_HUMAN/57-204);
(((((YNBD_ECOLI/82-202:1.16696,((Q9SVK7_ARATH/73-191:0.90402,(((Q19403_CAEEL/128-286:0.61956,O26889_METTH/59-174:0.50673):0.07706,((((PGPB_ECOLI/73-235:0.61588,PGPB_HAEIN/75-237:0.43012):0.35341,((((O59344_PYRHO/74-184:0.14152,Q9V1B5_PYRAB/75-185:0.40166):0.55137,Y662_METJA/106-213:0.41576):0.15545,Q9X361_BACAN/51-170:0.41550):0.06052,((Y374_METJA/211-328:0.24814,O67603_AQUAE/54-171:0.61649):0.18230,(Q9ZC96_RICPR/79-202:0.57942,(YJN4_YEAST/109-238:0.22003,YK33_YEAST/110-239:0.32627):0.49501):0.09797):0.18381):0.13101):0.07082,(CAX4_YEAST/59-187:0.55325,O59747_SCHPO/436-558:0.44572):0.34358):0.06071,((((Q06074_BACME/88-209:0.39680,Q55398_SYNY3/115-233:0.60391):0.10000,O07387_LACLC/88-212:0.51825):0.11980,O25522_HELPY/100-222:0.53390):0.06086,O34349_BACSU/77-199:0.54935):0.09488):0.17989):0.13052,((((((Q9Y744_EMENI/211-357:0.15536,Q9Y745_ASPFU/211-357:0.13636):0.23013,AUR1_SCHPO/176-322:0.23684):0.08860,((Q9Y7A0_CANTR/188-334:0.26575,(AUR1_CANAL/189-335:0.15129,Q9Y799_CANPA/192-338:0.13224):0.09256):0.09513,((AUR1_YEAST/176-322:0.11866,Q9Y797_CANGA/177-323:0.21739):0.13298,Q9Y798_ISSOR/184-331:0.26537):0.07482):0.06894):0.12950,Q9Y7A1_CRYNE/194-340:0.32853):0.60479,((((((LPP2_HUMAN/98-248:0.25924,LPP1_MOUSE/101-251:0.21156):0.11335,(Q9TXU1_CAEEL/112-266:0.40382,((((Q9VNU1_DROME/107-266:0.31121,(Q9VNU2_DROME/65-225:0.33522,Q9VNT9_DROME/134-293:0.26128):0.05748):0.09752,WUN_DROME/192-351:0.17962):0.07682,Q9VNT8_DROME/100-263:0.50108):0.10454,Q9VNU0_DROME/113-276:0.52599):0.09487):0.12313):0.15854,YSX3_CAEEL/125-278:0.58263):0.12537,(O75043_HUMAN/22-175:0.56788,Q22250_CAEEL/146-301:0.61260):0.18788):0.08892,((DPP1_YEAST/99-251:0.48119,Q9UUA6_SCHPO/92-244:0.42660):0.16721,(LPP2_ARATH/99-249:0.17889,LPP1_ARATH/124-273:0.27198):0.20868):0.27813):0.12287,Q9ZJ31_HELPJ/56-174:0.89791):0.07018):0.07878,Q9SUW4_ARATH/65-209:0.59961):0.06944):0.10262):0.13487,(Q9ZN40_HELPJ/78-191:0.69402,(Q56264_TREDE/64-202:0.56461,O83562_TREPA/53-211:0.51248):0.07935):0.16941):0.01224):0.25750,((((YC02_KLEPN/35-151:0.51871,Q9X647_AERHY/35-151:0.24977):0.35357,((Q9RUM9_DEIRA/115-233:0.43347,((Q9RHY7_CORAM/39-161:0.52131,O07235_MYCTU/90-210:0.49132):0.16910,O86624_STRCO/91-211:0.53299):0.04199):0.07498,((O86625_STRCO/65-183:0.40538,((Q9ZC02_STRCO/76-194:0.26467,(P72262_RHOER/62-180:0.13287,P72269_RHOER/62-180:0.23075):0.28089):0.20263,O53584_MYCTU/48-161:0.55892):0.08015):0.05877,O86825_STRCO/103-221:0.50467):0.04201):0.04761):0.05625,((YWOA_BACSU/52-168:0.41985,BCRC_BACLI/57-174:0.52636):0.16020,((O30906_SALTY/60-177:0.14951,YBJG_ECOLI/56-173:0.12199):0.33615,O87756_KLEPN/59-176:0.38785):0.05598):0.27362):0.06825,((PPA_ZYMMO/108-234:0.28746,PHON_SALTY/105-225:0.66577):0.63608,(((O82433_FUCDI/437-633:0.38538,Q7X9V0_9PHAE/386-599:0.35973):0.13805,Q8LLW7_COROI/376-581:0.51337):0.31790,(Q89ER7_BRAJA/257-413:0.56202,(((Q7UVW2_RHOBA/451-626:0.37562,Q8YZ15_ANASP/267-431:0.53488):0.14368,Q82PX4_STRAW/286-433:0.38233):0.28121,(PRXC_CURIN/329-526:0.18625,P79087_9PLEO/325-529:0.16870):0.40785):0.09848):0.15094):0.08081):0.26056):0.06372):0.19196,Q46511_DESMO/59-171:0.46877):0.50827,(Q9Z186_MOUSE/53-202:0.34898,G6PT_HAPNU/53-200:0.22885):0.15542):0.12051,G6PT_RAT/57-204:0.03987,G6PT_HUMAN/57-204:0.10256);