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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01557 alignment
(19 sequences with 240 aa)


YO23_CAEEL/28-195 LG---.NAIPKKPMLFVKTVNSFIVEGEP....IVAPPGCQN--......------------LHQEVELGVVIS.---KKASRISKSDAMDYIGGYTVALDMTARDFQDEAKKAGAP.-WFLAKSFDGSCPIGGFLPVSD-IPNPHDVEL....FCKINGKDQQRCRTDV.--MIFDIPT.-.--.--.--.---------------.--LLEYTTQFFTLEVGDVVLTGTPAGVTKINS
YCGM_ECOLI/33-201 MG---.SAVPEEPVLFIKPETALCDLRQP....LAIPSDFGS--......------------VHHEVELAVLIG.---ATLRQATEEHVRKAIAGYGVALDLTLRDVQGKMKKAGQP.-WEKAKAFDNSCPLSGFIPAAEFTGDPQNTTL....SLSVNGEQRQQGTTAD.--MIHKIVP.-.--.--.--.---------------.--LIAYMSKFFTLKAGDVVLTGTPDGVGPLQS
Y1656_METJA/54-215 LN---.MEIPEYPIIFLKPTSAIIYNEDY....IIRPRISKR--......------------VDYEVELAIVIG.---KKCKNIKKDEANDYIMGYTILNDVTARDLQ---QKDGQ-.-WTRAKSFDTFCPIGPRIVKDI---DPMNLNI....ECRVNGEIKQKSNTKN.--MIFDVYE.-.--.--.--.---------------.--LVEFVASIMTLYPGDIISTGTPPGVGELKA
Y2225_ARCFU/60-221 LN---.MPVPEEPILFMKPSTAVIGHDDC....IILPQISQR--......------------VDYEGELAVVIA.---EDCRNVPETNAADYILGYTCFNDVTARDLQ---AKDGQ-.-WTRAKSFDTFAPLGPYIAEID---DPSKLGI....QTRVNGKVVQKSNTSN.--LIFDVFQ.-.--.--.--.---------------.--LVSFVSSVMTLKAGDVIATGTPAGVGMLKD
O27551_METTH/74-235 LG---.MDIPDEPIIFLKPPTTVIGSGDT....VIYPEMSSE--......------------VDYEVELAAVVS.---ERARRVDSSAASEFIAGYTVLNDVTARDLQ---RRDGQ-.-WTRAKSFDTFCPIGPVIETDV---TPDNLDI....SLKLNGEVRQSSNTSN.--MIFTVHE.-.--.--.--.---------------.--LLEFISHVMTLEPGDVIATGTPPGVGQMVP
Y643_PYRHO/37-204 MG---.SEPPEEPIIFLKPPSALIGPGSS....IILPRRSKR--......------------VDHEVELAVIMG.---KRAKNVPASKAFDYILGYTIILDITARDLQAEARKKGYP.-WTISKGFDTFAPIGPRVVDSR-ELDPSDLEI....GLKVNGKIRQLGRTSQ.--MIFKIPE.-.--.--.--.---------------.--LIEYISHIMTLEPGDIIATGTPPGVGPLRH
O33119_MYCLE/51-218 MGGQT.GLASADPVIFLKPNTAIIGPNVP....IRLPANASP--......------------VHFEGELALVVG.---RSCKDVPAVQAVDCILGYTIGNDMSARDQQ---RADGQ-.-WTRAKGHDTFCPVGPWIVTDLGPLDPADLEL....RTAVNGEVKQHSRTSL.--MIHGIGA.-.--.--.--.---------------.--IMEWISAVMTLLPGDLILTGTPAGVGPVED
P73637_SYNY3/74-236 LG---.NDVPAEPLLFFKPPSAIAADQEE....IVYPSQSQR--......------------VDYEGELAVIIG.---KQVKDITEEEAASAIWGYTIANDITARDLQ---RQDSQ-.-WTRAKGFDGFCPLGPWVVRHI--DPEAHLET....TVNDEETPRQATAISD.--MVFTPPV.-.--.--.--.---------------.--LVSYISRVMTLYPGDVILTGTPEGISALQV
O68122_RHOCA/87-252 AG---.LTVPPEPVVFMKATSAICGPDDD....VEAPRGSEK--......------------LDWEVELAFVIG.---TRAKYVTLEDAMDHVAGYMICNDVSERSFQ--IERSGQ-.-WVKGKSHDTFAPLGPWLVTKDEIKDPQALDL....WLNVNGVRRQTGTTAT.--MVYGVAF.-.--.--.--.---------------.--LVHYLSQFMTLEPGDIITTGTPPGVGMGSR
O06724_BACSU/108-275 MG-SE.ADIPEHPMVFTKSPVTVTGHGDI....VKSHEEVTS--......-----------QLDYEGELAVVIG.---KSGTRISKEDAYDHVFGYTIVNDITARDLQ---KRHKQ-.-FFIGKSLDTTCPMGPVLVHKSSIQEPERLKV....ETRVNGELRQSGSASD.--MIFSIPE.-.--.--.--.---------------.--LIETLSKGMTLEAGDIIATGTPSGVGKGFT
HPCE_ECOLI/239-401 LE---.FKPPEEPLVFLKAPNTLTGDNQT....SVRPNNIEY--......------------MHYEAELVVVIG.---KQARNVSEADAMDYVAGYTVCNDYAIRDYL---ENYYRP.-NLRVKSRDGLTPMLSTIVPKEAIPDPHNLTL....RTFVNGELRQQGTTAD.--LIFSVPF.-.--.--.--.---------------.--LIAYLSEFMTLNPGDMIATGTPKG---LSD
O69352_RHOER/87-252 SGL--.-SLPEAPFVFTKFPGSITGPYNN....IELPDGS----......------------VDFEVELVAVIG.---RAARHVDASNGWDYVAGVTLGQDLSERQLQ---LSGPAPqQFSLGKSYAGFAPIGPVLVTPDEFADPDDIGV....STRLSGDEMQNSRTRH.--LIFPIPE.-.--.--.--.---------------.--LVAYLSSILPLSPGDLIFTGTPEGIGWTRE
O07875_9SPHN/20-185 AGLK-.-ELPTSPLIFTKFPTCIAGPYDD....LPLPVGN----......------------VDWEIELVAVIG.---TRASRVSVEDALDHVAGYAVGQDFSERLMQ---LSGGMP.QFSLGKSFPGFGPFGPWLVTLDALDETNGLAV....ECTVNGVKVQGSDTSQ.--LIFPVND.-.--.--.--.---------------.--LVSRLSHVCTLLPGDVIFTGTPAGVGNARN
O30145_ARCFU/124-297 LGMSIpQEWYQVPVGYKMNPYSVIGPEEP....VIWPSFTQI--......------------LDYELEFGIVVG.---KRGKNVSKEDAMDYVLGYTIVNDISARDMEFIELKAMPL.GPLKSKDFDNATPMGPCIVTKDEIKDPHNLKM....VARVNGEVWSEASTKD.--MHWKIPD.-.--.--.--.---------------.--LIAHLSKDQTIHPGTVMLSGTPGGGCGMHV
YNQ8_YEAST/26-225 LN---.NSTPKQPFFFLKPTSSIVTPLSSslvkTTRPANSTFNGlnedgtNPGPIFIPRGVKVHHEIELALIVS.KHLSNVTKMKPEEVYDSISGVALALDLTARNVQDEAKKKGLP.-WTISKGFDTFMPISAIVSREKFSSYKSNLQDifrvKCSVNGQLRQDGGTNL.--MLHPLHK.-.--.--.--.---------------.--ILQHISTMISLEPGDIILTGTPAGVGELKP
O07877_9SPHN/1-168 MG--F.KVDREAPFYFNKAASTFVASGST....IPYPPGTSN--......------------YHYEMELVVAIG.---KQAFQISEAEAGSIIYGFACGLDMTRRDLQLVAREKGRP.-WDLGKDFEQSAVVAPITKAAQFAIENQRIS-....-LSVNGEIKQDQVLAD.--LVWSVPE.-.--.--.--.---------------.--LIADLSRFYHLAPGDLIFTGTPAGVGPVVA
O65374_ARATH/166-351 ENAIN.PNWFRLPIAYHGRASSIVISGTD....IIRPRGQGHPQ......GNSEPYFGPSKKLDFELEMAAVVG.PGNELGKPIDVNNAADHIFGLLLMNDWSARDIQAWEYVPLGP.--FLGKSFG--TTISPWIVTLD-ALEPFGCQ-....-APKQDPPPLPYLAEK.ESVNYDISL.-.--.--.--.---------------.-ELAHHTVNGCNLRPGDLLGTGTISGPEPDSY
FAAA_HUMAN/145-359 ENALM.PNWLHLPVGYHGRASSVVVSGTP....IRRPMGQMKPD......DSKPPVYGACKLLDMELEMAFFVG.PGNRLGEPIPISKAHEHIFGMVLMNDWSARDIQKWEYVPLGP.--FLGKSFG--TTVSPWVVPMD-ALMPFAVP-....-NPKQDPRPLPYLCHD.EPYTFDINLsVnLKgEGmSQaATICKSNFKYMYWTMlQQLTHHSVNGCNLRPGDLLASGTISGPEPENF
FAAA_EMENI/152-371 DNALQ.PNYKHLPVAYHGRASSVVTSGTP....LHRPQGQILTNp...aaNPKLPTFSPCKKLDIELELAFFVS.TPNDLGHPVHIDKAEDHIFGVVLMNDWSARDIQAWEYVPLGP.--FNAKNFG--TTITPWVVLID-ALEPFRTVG....LEPGNRESLLPYLREKrADTAYDIPLeVeVTnAG.GEpTVISRSNAKNLLYSFpQMLAHHTITGCNLNTGDLLGSGTISGKENQTE