EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF01551 - Peptidase_M23)
Peptidase family M23
(Pfam reference: accession no. PF01551)
(Interpro reference: accession no. IPR002886)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
283 sequences @ 166 aa
(ave. pairwise identity: 0.36)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 142.72)
nucleotides
(available for above)
280 sequences @ 498 bp
(ave. pairwise identity: 0.44)
New Hampshire format
(total tree length: 110.01)
amino acids, restricted set
(corresp. to available nt seqs)
280 sequences @ 166 aa
(ave. pairwise identity: 0.36)
New Hampshire format
(total tree length: 141.82)