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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF01546 - Peptidase_M20) |
| Peptidase family M20/M25/M40 |
| (Pfam reference: accession no. PF01546) |
| (Interpro reference: accession no. IPR002933) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
374 sequences @ 671 aa (ave. pairwise identity: 0.25) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 153.39) |
| nucleotides (available for above) |
367 sequences @ 2013 bp (ave. pairwise identity: 0.39) |
New Hampshire format (total tree length: 122.73) |
|
amino acids, restricted set (corresp. to available nt seqs) |
367 sequences @ 671 aa (ave. pairwise identity: 0.25) |
New Hampshire format (total tree length: 151.31) |