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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF01535 - PPR)
PPR repeat
(Pfam reference: accession no. PF01535)
(Interpro reference: accession no. IPR002885)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
558 sequences @ 35 aa
(ave. pairwise identity: 0.23)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 420.08)
nucleotides
(available for above)
539 sequences @ 105 bp
(ave. pairwise identity: 0.41)
New Hampshire format
(total tree length: 258.92)
amino acids, restricted set
(corresp. to available nt seqs)
539 sequences @ 35 aa
(ave. pairwise identity: 0.23)
New Hampshire format
(total tree length: 408.33)