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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF01490 - Aa_trans)
Transmembrane amino acid transporter protein
(Pfam reference: accession no. PF01490)
(Interpro reference: accession no. IPR002422)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
27 sequences @ 555 aa
(ave. pairwise identity: 0.20)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 26.19)
nucleotides
(available for above)
25 sequences @ 1665 bp
(ave. pairwise identity: 0.37)
New Hampshire format
(total tree length: 15.32)
amino acids, restricted set
(corresp. to available nt seqs)
25 sequences @ 555 aa
(ave. pairwise identity: 0.20)
New Hampshire format
(total tree length: 24.02)