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PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF01478 phylogeny |
| ((LEP4_LEGPN/135-244,LEP4_BACNO/138-247),((LEP4_XANCP/133-242,Q87AA6_XYLFT/133-242),(O69081_PSEPG/1-106,LEP4_PSEAE/136-245)),((((((((((((((((((Q8F6L1_LEPIN/127-232,(Q8CNZ3_STAEP/98-194,Q8KYA3_STAAU/91-187)),(Q8Y6Y1_LISMO/101-204,Q92BG4_LISIN/101-204)),((Q891G5_CLOTE/115-221,(Q8XI34_CLOPE/100-206,Q97FF6_CLOAB/100-211)),Q97HN8_CLOAB/64-168)),((Q8DNN1_STRR6/96-190,Q8K6R2_STRP3/88-182),(Q8DVF1_STRMU/96-190,(Q8E192_STRA5/8-102,Q9CE22_LACLA/97-191)))),(((((((Q88XZ1_LACPL/99-198,((Q96YB0_SULTO/14-129,Q980Y8_SULSO/10-125),YC8A_METJA/6-148)),(Y902_METJA/9-134,(Q8NKW5_METVO/5-130,Q8X252_METMP/5-130))),Q8ZWV8_PYRAE/8-110),((O29326_ARCFU/8-129,(Q8THK9_METAC/8-134,(Q8PWB1_METMA/12-138,Q8TLD4_METAC/26-152))),Q8TMQ5_METAC/5-101)),Y83C_METJA/9-115),(((Q978Q1_THEVO/12-157,Q989C3_RHILO/11-122),Q8R8E5_THETN/6-111),(((((Q87I88_VIBPA/13-110,Q8ZI23_YERPE/10-109),((O66151_ACTAC/10-109,Q8KQJ2_HAEDU/11-110),Q9CMH2_PASMU/11-110)),Q8DA80_VIBVU/9-110),((Q92YL6_RHIME/12-116,(Q89UH6_BRAJA/9-113,Q9L719_CAUCR/10-114)),((Q8UIR9_AGRT5/8-113,Q92T43_RHIME/12-117),Q98BF9_RHILO/11-116))),Q89PI9_BRAJA/13-114))),(Y421_METTH/12-138,Q8TXH1_METKA/6-112))),(Q8RAF7_THETN/104-208,(Q8CXM1_OCEIH/104-208,(LEP4_BACSU/100-204,(Q8VQ80_BACLI/101-205,Q9K8H1_BACHD/15-120))))),((((((((Q87VV0_PSESM/5-111,Q88QB9_PSEPK/4-110),Q9HWA5_PSEAE/4-110),Q8Y1N3_RALSO/10-114),Q8XQX7_RALSO/14-117),(P95002_MYCTU/4-113,(Q8FT27_COREF/8-114,Q8NQ30_CORGL/4-110))),Q8FME5_COREF/77-189),Q89HG8_BRAJA/40-149),Q87M36_VIBPA/5-111)),((O67535_AQUAE/105-214,Q9X222_THEMA/103-204),(Q04904_ECOLI/71-179,(Q933W3_ECOLI/68-175,(O07379_9ZZZZ/78-183,Q9ZIU7_SALTI/78-184))))),((((Q8RHE5_FUSNN/7-119,Q9PP98_CAMJE/100-224),LEP4_VIBCH/112-221),Q57382_ECOLI/116-222),(LEP4_HAEIN/90-200,(Q8KRY3_ACTAC/90-200,Q9CPF6_PASMU/89-199)))),Q9S5E3_ECOLI/119-229),Q988A4_RHILO/13-122),(Q93R20_ACEDI/111-221,Q9ABP2_CAUCR/121-230)),(((LEP4_MYXXA/113-222,((LEP4_SYNY3/108-223,(Q8DLL0_SYNEL/89-199,Q8YXA0_ANASP/108-226)),Q9RSQ9_DEIRA/109-347)),Q9XAP1_STRCO/112-224),Q8VRL2_THETH/101-317)),((HOPD_SALTY/9-119,HOPD_ECOLI/9-119),LEP4_ECOLI/81-190)),(((O32576_ECOLI/98-207,LEP4_ERWCA/135-244),(LEP4_KLEPN/124-227,LEP4_ERWCH/136-245)),Q8GBD6_YEREN/122-231)),(Q8XVK3_RALSO/140-249,LEP4_BURPS/126-235)),(LEP4_NEIGO/134-243,Q8CZX6_YERPE/153-262)),((O68839_VIBCH/134-244,LEP4_AERSA/139-248),Q8EJP8_SHEON/157-266))); |
| ((LEP4_LEGPN/135-244:0.57592,LEP4_BACNO/138-247:0.45641):0.00000,((LEP4_XANCP/133-242:0.00302,Q87AA6_XYLFT/133-242:0.25047):0.53585,(O69081_PSEPG/1-106:0.17136,LEP4_PSEAE/136-245:0.11211):0.21697):0.03443,((((((((((((((((((Q8F6L1_LEPIN/127-232:2.02024,(Q8CNZ3_STAEP/98-194:0.53713,Q8KYA3_STAAU/91-187:0.44308):0.73702):0.15423,(Q8Y6Y1_LISMO/101-204:0.21766,Q92BG4_LISIN/101-204:0.16350):1.09816):0.28224,((Q891G5_CLOTE/115-221:0.63495,(Q8XI34_CLOPE/100-206:0.27331,Q97FF6_CLOAB/100-211:0.89835):0.22338):0.09859,Q97HN8_CLOAB/64-168:1.08924):0.44594):0.22888,((Q8DNN1_STRR6/96-190:0.73522,Q8K6R2_STRP3/88-182:0.47481):0.30308,(Q8DVF1_STRMU/96-190:0.35982,(Q8E192_STRA5/8-102:0.43395,Q9CE22_LACLA/97-191:0.96443):0.03460):0.00000):1.35754):0.18099,(((((((Q88XZ1_LACPL/99-198:2.04340,((Q96YB0_SULTO/14-129:0.21354,Q980Y8_SULSO/10-125:0.25013):1.01709,YC8A_METJA/6-148:1.01247):0.10487):0.06796,(Y902_METJA/9-134:0.32698,(Q8NKW5_METVO/5-130:0.28720,Q8X252_METMP/5-130:0.28358):0.04518):0.71335):0.00000,Q8ZWV8_PYRAE/8-110:2.08036):0.49566,((O29326_ARCFU/8-129:0.74134,(Q8THK9_METAC/8-134:0.50107,(Q8PWB1_METMA/12-138:0.09452,Q8TLD4_METAC/26-152:0.14675):0.23944):0.25126):0.17713,Q8TMQ5_METAC/5-101:0.91719):0.44535):0.20645,Y83C_METJA/9-115:0.82158):0.13004,(((Q978Q1_THEVO/12-157:1.13851,Q989C3_RHILO/11-122:1.35780):0.41666,Q8R8E5_THETN/6-111:0.84791):0.20661,(((((Q87I88_VIBPA/13-110:1.34573,Q8ZI23_YERPE/10-109:0.34073):0.24539,((O66151_ACTAC/10-109:0.27407,Q8KQJ2_HAEDU/11-110:0.37891):0.05654,Q9CMH2_PASMU/11-110:0.28749):0.44281):0.66351,Q8DA80_VIBVU/9-110:1.24490):0.05541,((Q92YL6_RHIME/12-116:0.58263,(Q89UH6_BRAJA/9-113:0.41320,Q9L719_CAUCR/10-114:0.77309):0.14809):0.10261,((Q8UIR9_AGRT5/8-113:0.40011,Q92T43_RHIME/12-117:0.24706):0.09521,Q98BF9_RHILO/11-116:0.35556):0.11902):0.85864):0.13441,Q89PI9_BRAJA/13-114:0.65128):0.21262):0.04755):0.00000,(Y421_METTH/12-138:1.00847,Q8TXH1_METKA/6-112:1.05019):0.39748):0.34907):0.00000,(Q8RAF7_THETN/104-208:1.00510,(Q8CXM1_OCEIH/104-208:0.62398,(LEP4_BACSU/100-204:0.56876,(Q8VQ80_BACLI/101-205:0.51960,Q9K8H1_BACHD/15-120:0.53552):0.06459):0.00207):0.45335):0.37251):0.05477,((((((((Q87VV0_PSESM/5-111:0.46634,Q88QB9_PSEPK/4-110:0.26244):0.46914,Q9HWA5_PSEAE/4-110:0.72195):0.85843,Q8Y1N3_RALSO/10-114:0.60172):0.18978,Q8XQX7_RALSO/14-117:0.75975):0.06002,(P95002_MYCTU/4-113:0.75131,(Q8FT27_COREF/8-114:0.33346,Q8NQ30_CORGL/4-110:0.49080):0.57597):0.59689):0.05118,Q8FME5_COREF/77-189:1.18228):0.32613,Q89HG8_BRAJA/40-149:1.31511):0.36020,Q87M36_VIBPA/5-111:0.99524):0.11338):0.16420,((O67535_AQUAE/105-214:0.89386,Q9X222_THEMA/103-204:1.00079):0.17564,(Q04904_ECOLI/71-179:0.69381,(Q933W3_ECOLI/68-175:0.75779,(O07379_9ZZZZ/78-183:0.76944,Q9ZIU7_SALTI/78-184:0.97026):0.58051):0.33607):0.96453):0.23422):0.14696,((((Q8RHE5_FUSNN/7-119:1.77684,Q9PP98_CAMJE/100-224:1.17728):0.36291,LEP4_VIBCH/112-221:0.42763):0.26905,Q57382_ECOLI/116-222:0.96343):0.31430,(LEP4_HAEIN/90-200:0.56241,(Q8KRY3_ACTAC/90-200:0.40017,Q9CPF6_PASMU/89-199:0.55200):0.09337):0.84870):0.10956):0.00739,Q9S5E3_ECOLI/119-229:0.87596):0.26352,Q988A4_RHILO/13-122:1.48085):0.05209,(Q93R20_ACEDI/111-221:0.87779,Q9ABP2_CAUCR/121-230:0.79915):0.38723):0.10580,(((LEP4_MYXXA/113-222:1.07539,((LEP4_SYNY3/108-223:0.37884,(Q8DLL0_SYNEL/89-199:0.43559,Q8YXA0_ANASP/108-226:0.46345):0.12235):0.34355,Q9RSQ9_DEIRA/109-347:0.84640):0.00000):0.28093,Q9XAP1_STRCO/112-224:0.99691):0.12053,Q8VRL2_THETH/101-317:0.80274):0.16952):0.01874,((HOPD_SALTY/9-119:0.19998,HOPD_ECOLI/9-119:0.28415):0.54556,LEP4_ECOLI/81-190:0.41472):0.13556):0.26670,(((O32576_ECOLI/98-207:0.39947,LEP4_ERWCA/135-244:0.13868):0.07690,(LEP4_KLEPN/124-227:0.18473,LEP4_ERWCH/136-245:0.22415):0.06081):0.13573,Q8GBD6_YEREN/122-231:0.37326):0.08559):0.05708,(Q8XVK3_RALSO/140-249:0.20735,LEP4_BURPS/126-235:0.48265):0.12130):0.03788,(LEP4_NEIGO/134-243:0.24795,Q8CZX6_YERPE/153-262:0.41519):0.15363):0.07255,((O68839_VIBCH/134-244:0.22232,LEP4_AERSA/139-248:0.09279):0.05822,Q8EJP8_SHEON/157-266:0.24033):0.03198):0.07830); |