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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01477 phylogeny
for nucleotide alignment


 
(((((((((((((((LOXB_LYCES/52-156,O22508_SOLTU/52-158),Q43800_TOBAC/52-158),Q43191_SOLTU/54-159),((((((O24470_PEA/70-173,O24295_PEA/68-172),LOXX_SOYBN/66-169),LOXA_PHAVU/66-169),((LOX2_SOYBN/70-173,(LOX3_PEA/61-164,O04919_VICFA/57-160)),(Q43817_PEA/68-171,LOX1_LENCU/65-169))),Q43438_SOYBN/42-143),Q42710_CUCSA/75-178)),LOX1_ARATH/54-159),Q41430_SOLTU/66-169),Q9ZU05_PERAE/52-157),(((Q42847_HORVD/53-161,P93190_HORVU/52-159),LOX2_ORYSA/50-156),Q42846_HORVU/58-164)),((LOXC_ARATH/106-197,((P93698_VIGUN/104-201,Q96573_LYCES/98-195),Q9SMW1_ARATH/119-220)),(Q9XHM7_ORYSA/10-116,LOX21_HORVU/115-215))),(((((LX1B_HUMAN/2-121,LX1B_MOUSE/2-122),Q9XT59_BOVIN/1-112),(LOXR_HUMAN/2-116,LOXE3_MOUSE/2-116)),(((LOXP_MOUSE/1-110,LOXP_HUMAN/1-110),LOXE_MOUSE/2-111),(LOXP_BOVIN/1-111,(LOX1_RABIT/1-111,(LOXL_MOUSE/1-111,LOX1_HUMAN/1-110))))),LOX5_HUMAN/1-114)),(((AOSL_PLEHO/374-490,YS89_CAEEL/2182-2307),((((Q9SIE7_ARATH/31-155,O65660_ARATH/29-163),(PHLC_CLONO/284-398,PHLC_CLOBI/282-398)),Q9VJS0_DROME/782-897),RA6I1_HUMAN/957-1059)),((PKD1_HUMAN/3118-3233,O42181_FUGRU/3249-3364),(PKDRE_MOUSE/1114-1228,PKDRE_HUMAN/1230-1348)))),(((LIP1_RAT/356-467,Q28287_CANFA/316-427),(((LIPP_CAVPO/355-465,LIPP_MYOCO/347-457),LIPP_RAT/355-465),LIPP_RABIT/355-465)),(LIP2_HUMAN/357-469,LIP2_MYOCO/358-470))),(LIPE_MOUSE/347-483,LIPE_HUMAN/347-483)),(((Q92173_BRARE/179-304,Q9W6Y2_ONCMY/351-477),LIPL_CHICK/341-465),(LIPL_CAVPO/331-455,LIPL_MOUSE/341-465))),LIPH_HUMAN/352-487,LIPH_MOUSE/353-488);
(((((((((((((((LOXB_LYCES/52-156:0.14409,O22508_SOLTU/52-158:0.12316):0.03660,Q43800_TOBAC/52-158:0.06679):0.03302,Q43191_SOLTU/54-159:0.12394):0.06815,((((((O24470_PEA/70-173:0.13260,O24295_PEA/68-172:0.09228):0.05268,LOXX_SOYBN/66-169:0.12445):0.05088,LOXA_PHAVU/66-169:0.08553):0.06215,((LOX2_SOYBN/70-173:0.18223,(LOX3_PEA/61-164:0.11810,O04919_VICFA/57-160:0.21994):0.04679):0.01310,(Q43817_PEA/68-171:0.08383,LOX1_LENCU/65-169:0.13051):0.09146):0.03403):0.08593,Q43438_SOYBN/42-143:0.15047):0.21241,Q42710_CUCSA/75-178:0.19227):0.07818):0.05102,LOX1_ARATH/54-159:0.27264):0.10728,Q41430_SOLTU/66-169:0.24036):0.07633,Q9ZU05_PERAE/52-157:0.15730):0.20690,(((Q42847_HORVD/53-161:0.11058,P93190_HORVU/52-159:0.09184):0.05353,LOX2_ORYSA/50-156:0.06147):0.09415,Q42846_HORVU/58-164:0.21351):0.04638):0.26702,((LOXC_ARATH/106-197:0.44510,((P93698_VIGUN/104-201:0.23724,Q96573_LYCES/98-195:0.40285):0.06907,Q9SMW1_ARATH/119-220:0.39068):0.08647):0.16027,(Q9XHM7_ORYSA/10-116:0.24241,LOX21_HORVU/115-215:0.35307):0.08518):0.12725):0.52842,(((((LX1B_HUMAN/2-121:0.06357,LX1B_MOUSE/2-122:0.21170):0.04525,Q9XT59_BOVIN/1-112:0.08916):0.23844,(LOXR_HUMAN/2-116:0.23170,LOXE3_MOUSE/2-116:0.30553):0.09169):0.14290,(((LOXP_MOUSE/1-110:0.14027,LOXP_HUMAN/1-110:0.11936):0.04759,LOXE_MOUSE/2-111:0.30220):0.03272,(LOXP_BOVIN/1-111:0.08109,(LOX1_RABIT/1-111:0.13617,(LOXL_MOUSE/1-111:0.22376,LOX1_HUMAN/1-110:0.05776):0.04267):0.01749):0.08808):0.33051):0.17909,LOX5_HUMAN/1-114:0.19177):0.12755):0.15838,(((AOSL_PLEHO/374-490:0.57243,YS89_CAEEL/2182-2307:0.49020):0.24225,((((Q9SIE7_ARATH/31-155:0.21866,O65660_ARATH/29-163:0.16952):0.61048,(PHLC_CLONO/284-398:0.12511,PHLC_CLOBI/282-398:0.39710):0.67668):0.16717,Q9VJS0_DROME/782-897:0.73741):0.33023,RA6I1_HUMAN/957-1059:0.80420):0.06717):0.07163,((PKD1_HUMAN/3118-3233:0.22135,O42181_FUGRU/3249-3364:0.17440):0.26196,(PKDRE_MOUSE/1114-1228:0.17811,PKDRE_HUMAN/1230-1348:0.19231):0.40636):0.13318):0.12940):0.28517,(((LIP1_RAT/356-467:0.13921,Q28287_CANFA/316-427:0.10875):0.12457,(((LIPP_CAVPO/355-465:0.09201,LIPP_MYOCO/347-457:0.10171):0.05935,LIPP_RAT/355-465:0.12531):0.03753,LIPP_RABIT/355-465:0.07901):0.12274):0.17124,(LIP2_HUMAN/357-469:0.11838,LIP2_MYOCO/358-470:0.09139):0.05879):0.63886):0.25860,(LIPE_MOUSE/347-483:0.17486,LIPE_HUMAN/347-483:0.11469):0.24834):0.23001,(((Q92173_BRARE/179-304:0.17719,Q9W6Y2_ONCMY/351-477:0.19627):0.22856,LIPL_CHICK/341-465:0.17866):0.05130,(LIPL_CAVPO/331-455:0.11923,LIPL_MOUSE/341-465:0.09013):0.09259):0.22287):0.27697,LIPH_HUMAN/352-487:0.08568,LIPH_MOUSE/353-488:0.10725);