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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01477 phylogeny
for amino acid alignment


 
(((((((((((((Q43800_TOBAC/52-158,LOXB_LYCES/52-156),O22508_SOLTU/52-158),Q43191_SOLTU/54-159),LOX1_ARATH/54-159),(((((Q42847_HORVD/53-161,LOX2_ORYSA/50-156),P93190_HORVU/52-159),Q42846_HORVU/58-164),Q9ZU05_PERAE/52-157),Q41430_SOLTU/66-169)),(((LOX2_SOYBN/70-173,(((((O24470_PEA/70-173,O24295_PEA/68-172),LOXX_SOYBN/66-169),LOXA_PHAVU/66-169),O04919_VICFA/57-160),(LOX3_PEA/61-164,(Q43817_PEA/68-171,LOX1_LENCU/65-169)))),Q43438_SOYBN/42-143),Q42710_CUCSA/75-178)),((P93698_VIGUN/104-201,(((Q9XHM7_ORYSA/10-116,LOX21_HORVU/115-215),LOXC_ARATH/106-197),Q96573_LYCES/98-195)),Q9SMW1_ARATH/119-220)),(((RA6I1_HUMAN/957-1059,Q18780_CAEEL/1134-1236),((((AOSL_PLEHO/374-490,(((((LX1B_HUMAN/2-121,LX1B_MOUSE/2-122),Q9XT59_BOVIN/1-112),(LOXR_HUMAN/2-116,LOXE3_MOUSE/2-116)),(((LOX1_HUMAN/1-110,((LOXL_MOUSE/1-111,LOX1_RABIT/1-111),LOXP_BOVIN/1-111)),LOXE_MOUSE/2-111),(LOXP_MOUSE/1-110,LOXP_HUMAN/1-110))),LOX5_HUMAN/1-114)),YS89_CAEEL/2182-2307),(PKDRE_MOUSE/1114-1228,PKDRE_HUMAN/1230-1348)),(PKD1_HUMAN/3118-3233,O42181_FUGRU/3249-3364))),((Q9VJS0_DROME/782-897,(Q9SIE7_ARATH/31-155,O65660_ARATH/29-163)),P91289_CAEEL/722-838))),(PHLC_CLONO/284-398,PHLC_CLOBI/282-398)),(((LIP1_RAT/356-467,Q28287_CANFA/316-427),((LIPP_CAVPO/355-465,((LIPP_RABIT/355-465,LIPP_MYOCO/347-457),LIPP_RAT/355-465)),LIPP_PIG/339-450)),((P81139_CAVPO/322-434,LIP2_MYOCO/358-470),(LIP2_HUMAN/357-469,LIP2_RAT/356-468)))),(LIPE_MOUSE/347-483,LIPE_HUMAN/347-483)),(((Q92173_BRARE/179-304,Q9W6Y2_ONCMY/351-477),LIPL_CHICK/341-465),(LIPL_CAVPO/331-455,LIPL_MOUSE/341-465))),LIPH_HUMAN/352-487,LIPH_MOUSE/353-488);
(((((((((((((Q43800_TOBAC/52-158:0.07942,LOXB_LYCES/52-156:0.22403):0.02938,O22508_SOLTU/52-158:0.16184):0.05245,Q43191_SOLTU/54-159:0.14989):0.11755,LOX1_ARATH/54-159:0.34721):0.01962,(((((Q42847_HORVD/53-161:0.14888,LOX2_ORYSA/50-156:0.14781):0.04298,P93190_HORVU/52-159:0.15923):0.27616,Q42846_HORVU/58-164:0.42876):0.13537,Q9ZU05_PERAE/52-157:0.19570):0.05950,Q41430_SOLTU/66-169:0.26149):0.06512):0.00000,(((LOX2_SOYBN/70-173:0.16935,(((((O24470_PEA/70-173:0.12198,O24295_PEA/68-172:0.12450):0.06530,LOXX_SOYBN/66-169:0.10293):0.08662,LOXA_PHAVU/66-169:0.11060):0.13108,O04919_VICFA/57-160:0.29983):0.04394,(LOX3_PEA/61-164:0.12428,(Q43817_PEA/68-171:0.06679,LOX1_LENCU/65-169:0.19979):0.10860):0.01754):0.04607):0.07872,Q43438_SOYBN/42-143:0.16121):0.24496,Q42710_CUCSA/75-178:0.30753):0.08264):0.38283,((P93698_VIGUN/104-201:0.28761,(((Q9XHM7_ORYSA/10-116:0.42031,LOX21_HORVU/115-215:0.65964):0.17957,LOXC_ARATH/106-197:0.66343):0.15071,Q96573_LYCES/98-195:0.37600):0.10950):0.37989,Q9SMW1_ARATH/119-220:0.28716):0.50645):1.98012,(((RA6I1_HUMAN/957-1059:0.83329,Q18780_CAEEL/1134-1236:0.93577):0.53164,((((AOSL_PLEHO/374-490:0.78186,(((((LX1B_HUMAN/2-121:0.13209,LX1B_MOUSE/2-122:0.21430):0.07581,Q9XT59_BOVIN/1-112:0.13058):0.54381,(LOXR_HUMAN/2-116:0.34890,LOXE3_MOUSE/2-116:0.37103):0.14032):0.19537,(((LOX1_HUMAN/1-110:0.07738,((LOXL_MOUSE/1-111:0.26543,LOX1_RABIT/1-111:0.26797):0.07640,LOXP_BOVIN/1-111:0.14491):0.03125):0.16151,LOXE_MOUSE/2-111:0.46561):0.06685,(LOXP_MOUSE/1-110:0.15287,LOXP_HUMAN/1-110:0.15699):0.08461):0.66342):0.25614,LOX5_HUMAN/1-114:0.37249):0.41791):0.33915,YS89_CAEEL/2182-2307:0.95172):0.20648,(PKDRE_MOUSE/1114-1228:0.14070,PKDRE_HUMAN/1230-1348:0.24122):0.52220):0.21001,(PKD1_HUMAN/3118-3233:0.25268,O42181_FUGRU/3249-3364:0.14218):0.49979):0.28244):0.11403,((Q9VJS0_DROME/782-897:0.95256,(Q9SIE7_ARATH/31-155:0.07899,O65660_ARATH/29-163:0.33621):1.91212):0.44069,P91289_CAEEL/722-838:1.26816):0.25798):0.02781):0.07224,(PHLC_CLONO/284-398:0.12458,PHLC_CLOBI/282-398:0.63881):1.98945):0.60082,(((LIP1_RAT/356-467:0.12481,Q28287_CANFA/316-427:0.12336):0.16014,((LIPP_CAVPO/355-465:0.13560,((LIPP_RABIT/355-465:0.11342,LIPP_MYOCO/347-457:0.13694):0.05208,LIPP_RAT/355-465:0.08841):0.03514):0.05416,LIPP_PIG/339-450:0.14816):0.19432):0.12763,((P81139_CAVPO/322-434:0.28623,LIP2_MYOCO/358-470:0.07082):0.03619,(LIP2_HUMAN/357-469:0.13905,LIP2_RAT/356-468:0.12823):0.05091):0.15031):0.77129):0.60688,(LIPE_MOUSE/347-483:0.11158,LIPE_HUMAN/347-483:0.19905):0.39438):0.18250,(((Q92173_BRARE/179-304:0.13701,Q9W6Y2_ONCMY/351-477:0.21262):0.40392,LIPL_CHICK/341-465:0.13465):0.09090,(LIPL_CAVPO/331-455:0.12682,LIPL_MOUSE/341-465:0.09382):0.09518):0.29221):0.53775,LIPH_HUMAN/352-487:0.02726,LIPH_MOUSE/353-488:0.19429);