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Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF01477 - PLAT)
PLAT/LH2 domain
(
Pfam
reference: accession no.
PF01477
)
(
Interpro
reference: accession no.
IPR001024
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
75 sequences @ 159 aa
(ave. pairwise identity: 0.20)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 40.94)
nucleotides
(available for above)
70 sequences @ 477 bp
(ave. pairwise identity: 0.37)
New Hampshire format
(total tree length: 24.27)
amino acids, restricted set
(corresp. to available nt seqs)
70 sequences @ 159 aa
(ave. pairwise identity: 0.21)
New Hampshire format
(total tree length: 37.53)