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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01443 alignment
(72 sequences with 288 aa)


VHEL_NMV/26-224 IIIHGVAGCGKSTIIQKIALA---------------FPELLIG-......SFTPALLDSNSGRKQLAVTS-----DPLDILDEYLGGP------..----NPVVRLAKFCDPLQYSCEQP----EVPHFTSLL...-TWRFCVRTTALLNGIFGCQIKSR-----...-.REDLCHLTHENPY-----TTDPKGV---..-VVAHEQEVINLLLQHGCP---.----..----VTPTQHLWGLTIPVVSVYITSIASLSTVD--...--RANLFLSLTRDSKALHIFE
O37154_9VIRU/26-224 LVVHGIAGSGKSTILTTFHHH-----------YPA-HPIFSHS-......PTLLDPSNRIYQQCITTDSVPD-----GAIVDEY-NYK---ALD..----YS-RCLALFGDPLQLP----HS--LRPHYYSSR...-THRYGPKLTSLLNDLFHLSITSLA----...-p---VDNLDYADPF-----AVDPSGF---..-TIADEEVYNFVSQQVPGT---.----..----LLPLDTV-GLEYSSVSFYCSDLR--RCVV--...LRPLSTFIALTRAKGNLTIFD
Q86822_PAMV/28-230 IVVQGIAGCGKTTLLRNFHQE------------YPSIPIYSCFP......-QKISENSEELQLLAKARFT------ASAILDEYLAHK---FDY..-----QK-CLAVFADPLQYSHLG----ALRPHYQTSK...---HIGLVLVLLILSLRNWIPIES-----...-.LLSEEKTILKECDP---YATDPIGQ---..-IIASNHEVLNYIKPQAVE---.----..----AICSCEVLGKEFQTVSCYYQSHKLEDSAE--...-ERRGLYIAISRAKSAVLLFD
Q67655_9VIRU/24-227 KVVLGVPGCGKSRLHRKLINQ-----------DSR-FIAPTFGA......PDPLNVTGRRIRAVSELDTFD--RTGKFLLLDEFQQGDF-----..----EGLKPCPLW-HVCQFFDSARPY--PIADWYKTL...-SHRVNKTTCDFLRNFGFEITSSV-----...-.---QGNLTFGGLY-----EEELQGV---..-VITYCTQVSALVESHRVE---.----..----HYKLADCRGSEFNNVSLCLS-DSV--VHS--...EDLAKFYVCATRSRGDLLILT
Q67552_9VIRU/24-228 KVVLGVPGCGKSSCIRKLINL-----------DSR-FIAATFGA......PDPLNVTGRRIHSVGELAKID--CTGKFLLLDEFQQGGF-----..----EELKPFALFGDVCQFFDSDRPC--PIADWCKTL...-SHRVNKPTCDFLREFGFEITSSK-----...-.---EGTLVFGGLY-----EEELLGV---..-VITYCSQVSNLLKAHQVD---.----..----HFTLASCRGSEFPKVCLCLS-DSI--IQR--...EDLAKFYVCATRSRGDLLILT
VHEL_LVX/23-216 TVVHTVAGSGKTTFIRNLLID------------HPQLVARTYGT......PDVPNLLGYGIRDRHG----------DAHIVDEYPAAD---LR-..----SHPSVSIVFADPLQHHGEVR-----PAHFTCSH...-THRFGKSTCSLLGTLGVYCTSDK-----...-.---EDSVTFAGAY-----LAEPVGT---..-LIALGEDAELVLDNHRVE---.----..----YFTPCQALGLTFPSVTLLTDAPIEDQ-----...-PPVSRYIALTRHTDSLLILN
VHEL_CVB/24-223 IVVHCMPGAGKSSCIRALLKA-----------DSR-FVAYTLGV......PDPCNLDGLCIKAFTGSV-----DLKYFNILDEYARYNG-----..----DASDFFALFGDPVQSPPR--NL--YRAHFKAVL...-SKRFGSCTAQLLRELGFEVESTK-----...-.---EDLVSIRGLY-----DFDPVGT---..-VIYYEKEIGCLLRAHSIE---.----..----AYEPEEVVGKTFETVTFVTA-ENH--IPA--...ESRHLVYQCLTRHRSVLHLMT
VHEL_PVMR/24-221 IVVHCVPGAGKSSLIRELLEL-----------DSR-FCAYTAGV......EDQPRLSGNWIRKWSGQQ-----PEGKFVVLDEYTLLT------..----EVPPVFALFGDPIQSNTS--AV--QRADFVCSV...-SRRFGSATCGLLRELGWNVRSEK-----...-.---ADLVQVSDIY-----TKDPLGK---..-VVFSEEEVGCLLRSHGVE---.----..----ALSLQEITGQTFEVVTFVTS-EN---SPV--...INRAAAYQCMTRHRTALHILC
Q83086_LSV/24-220 IVVHSVPGGGKSSLIRKLINK-----------DRR-FSAYTFGL......EDCESITGVRIKKAHACI-----PRSEFVVFDEYIEGD------..----APPWAFAVFADPLQGGPG--PF--LRAHFIKRR...-SHRFGKCTAQLLNDLSYEVESDL-----...-.---ADVVQIQGLY-----ETDLQGT---..-VVYYEACVGNLLRAHSVP---.----..----AYCISEIRGQTFESVTFVTS-EN---YP---...VDRALAFQCLTRHRSSLLILS
VHEL_PVSP/24-219 IVVHSVPGAGKSSAIRELLKL-----------DSR-FECITRGR......PDIPNLEGAFIKAERS-------GESKLLLVDEYIEGP------..----IPEDAFAIFADPLQSTAV--SP--HRAHFIKTL...-SHRFGKCTDSLLRDLGWDVQAEG-----...-.---QDSVQIADIF-----TVDPRET---..-IVYFEPEVGELLRSHGVE---.----..----ASCIGEVRGATFEHVTFVTS-EN---SPL--...IDKASAFQCLTRHTKSLLILC
Q64963_9VIRU/24-222 IVVHAVPGSGKTTLIKQALIR------------NNNIEAVTFGV......PEKANIHGTYIKKARQGQRGR----GNYSILDEYLSG-------..---EYSTGFNCLFSDPYQN--HG---DCLRAHFIGRC...-SHRFGRQTVQILRDLGYNIASSK-----...-.---EDIVEKKNIFQ----LIEPEGV---..-IICLEKGVEDFLKWHSVE---.----..----YKFPCQVRGATFDIVTFIHEKPLEELVG---...---PDLFVALTRHRSKLVLVS
O91633_9VIRU/24-221 IVVHGVPGCGKSTLVRKFLDL-------------EDFHAQTFGV......SKPTNLSGRGVEKAPVPLQSG------FNILDEYLSGP------..----YSEGFDLFLSDPYQNFRKP-----LTAHYINSC...-THRFGPSVCQFLNKLGFEIESAK-----...-.-EEDTELIFGKVFG-----GTIRGE---..-IICFEKEIEELLRSHSAS---.----..----FHHPCDLRGAEFDDVTFISAHTDLQEIVG--...---PDLYVALTRAKKSLTILQ
O91902_9VIRU/24-221 VVIHSVPGSGKSSLIRELISE-----------DEN-FIAFTAGV......PDSPNLTGRYIKPYSPG--CA--VPGKVNILDEYLSVQ------..----DFSGFDVLFSDPYQNISIP-----KEAHFIKSK...-TCRFGVNTCKYLSSFGFKVSSDG-----...-.---LDKVIVGSPF-----TLDVEGV---..-LICFGKEAVDLAVAHNSE---.----..----FKLPCEVRGSTFNVVTLLKS-RDP--TP---...EDRHWFYIAATRHREKLIIMQ
VHEL_PMV/24-222 LVVHSVAGSGKSTLIRKFLEE-----------QPL-ARAYTHCR......ADPPNLEGRFIQPFKGPCP------DHFNILDEYCK------EP..----ISAKFQVLIADPLQYRTQH-----LRPHYVNHK...-SHRLGPETCKLLSSLGIKVESHR-----...-.-RDRDVVTLSGIF-----GSPILGQ---..-AIALDRSASDLLRAHGIQ---.----..----ALCPIESIGQEYPVVTVVSS-EPL--RNV--...RFKDQVYIALSRHTEQLHVLS
VHEL_P1AMV/24-223 LVVHAVAGAGKTTLIQNLLPE-----------HPN-LAAQTAGS......PQTPNLTGAFIRKLTCPES------NKINLLDEYAA-----LQP..----LKGSWDVVLADPLQHPGLA-----LRPHFIKSV...-SHRLCPATTRLISKLVCPCTSSR-----...-.-TEESTIQFSGLF-----EGPLLGT---..-VIALDQTTQALLTAHGAH---.----..----FLCPTAALGLEFDTVTVVSA-LPL--EEV--...ADKVGLYISLSRHRSQLHVRS
Q65975_9VIRU/24-224 LVVHAVAGAGKSTVLRNFCKL-----------EPT-AVAYTHGK......PDPPNLEQTHIRVVQNPVK------GHFCLLDEYTAQG---VSN..----IEG-WSALLADPLQHDSPA-----LRPHFVKYL...-SHRICPKTATLLQELGIKIQSAR-----...-.-QDEAEINFTGLF-----DGPIIGT---..-VIHLDQIAKKLASSHGIH---.----..----SYCPRELRSFETDVVTVLST-SPI--TEL--...NDKVGLYIACTRHTTALHVRA
VHEL_FXMV/27-229 LVIHAVAGAGKTTLLRSLL-E-----------LPG-VEVFTGGE......HDPPNLSGKYIRCAAPPVA------GAYNILDEYPAYP---NWR..----SQP-WNVLIADNLQYKEPT-----RRAHYTCNR...-THRLGQLTVDALRRVGFDITFAG-----...-tQTEDYGFQEGHLY-----TSQFYGQ---..-VISLDTQAHKIAVRHGLA---.----..----PLSALETRGLEFDETTVITTKTSL--EEV--...KDRHMVYVALTRHRRTCHLYT
Q65007_9VIRU/27-230 LVVHAVAGAGKTTLLREILNT-----------IPG-VTIHTAGT......PDPPNLTLNYIKGQEPPCP------KKYTILDEYPARA---KWP..----EEA-WDMLIADNLQHTGPT-----TRPHYIKHT...-TYRLGPQTVKTLQSLGYQLEFQHR----...-aDQQDQGFSFTGLF-----DGPIYGQ---..-PITLDTAAHNLALAHGLP---.----..----ALQATQTRGLEYDTTTIISS-TPL--PTV--...KDKVGLYIAFTRHRKACHIRA
VHEL_PVXX3/25-224 LVVHAVAGAGKSTALRKLILR-----------HPT-FTVHTLGV......PDKVSIRTRGIQK-PGPIPE-----GNFAILDEYTLD----NTT..----RNS-YQALFADPYQAPEFS-----LEPHFYLET...-SFRVPRKVADLIAGCGFDFETNS-----...-.-QEEGHLEITGIF-----KGPLLGK---..-VIAIDEESETTLSRHGVE---.----..----FVKPCQVTGLELKVVTIVSA-API--EEI--...GQSTAFYNAITRSKGLTYVRA
VHEL_SMYEA/25-221 IVVHAVAGAGKSSVINTVSLT-----------FQL-ICWTTL--......PEEKASFNCLHLRHLDGPAFP------GAFVDEY-QLA---DTD..----LS-EAAFLFGDPLQYPGP--AA--QVPHFVKLF...-SHRCGLNSASLIRELGIAFEASKL----...-.----DSVQHLDPY-----SSDPEGT---..-ILAFEPEVQAALASHSLD---.----..----FLCLDEFRGKQWPVCTLYVSTKN--LCDL--...DRPS-VYVALTRHYERLLIMS
VHEL_WCMVO/24-228 IVVHAIAGSGKSTVIRKILSD-----------LPN-ARAYTLGK......PDPYSLSNPTIKAFAQFKRGT------LDILDEYGQLP---FAD..----LDSSFEFIFTDPYQAPTD--NL--FEPHYTLEI...-TYRFGPNTCNLLNQAFQSNITSLV----...-t---QDNISFGSPY-----LVDPVGT---..-ILAFQPDTYLILCLHQAP---.----..----FFKVSEVIGYQWPTVTLYLACKISEIPEE--...ERHL-LFIGLTRHTESLLILG
O55602_9VIRU/29-231 IVVHGVPGCGKSTLIKDLV-T-----------RHS-TIAYTLGA......PYGRSLIHSGVN--HISRIGDNLQDFETRILDEYQLGN----EE..----NVKDFTILFGDPFQGTFQ------LPAHFVKRL...-SHRVPRQICNYLESLDYDITGET-----...-.EGEINFPPIYAAN-----ATGPIGT---..-VLHLGPISRQLTKTFGIC---.----..----SKLPTEVQGLEFEELTLVYH--SS--ELQ--...ANRELFFVAVTRAKRLLNVLT
O55600_9VIRU/33-234 IVIHGVPGCGKSTLIKTLI-T-----------HQS-VVAYTLGI......PYGKTLAHPGIQ--RPTNICD-NQEAETRILDEYQLGL----KV..----DLEPFNVLVGDPFQGRST------YRAHFVKTF...-SHRVPRPVCEFLNSLGYDIQGDK-----...-.EGSLKVLPVFQHN-----SEGPKVV---..-VIHLGPISCQLTQTYRVP---.----..----SKTTSEVQGLEFKEVTLVFH--SS--ELP--...ENSETFFIATTRASECLNIIT
O09499_9VIRU/26-227 LIVHGVPGCGKSTLIKTLI-T-----------HQS-VSAYTLGV......PYGKTLAHPGVL--NPPTLED-IFDFETRILDEYQLGA----KE..----DFKAFNILFGDPFQGDTH------LPAHFIKSL...-SHRVPRQICQFLNSLQYEIQGER-----...-.EGTLNHLPVFEAN-----STGPRGV---..-VLHLGPISCQLTRTYRVA---.----..----SKTPAEVQGLEFKEVTLVYH--SS--ELT--...ADPNAFFIAATRACGCLGLIT
VHEL_SHVX/26-227 LIIHGVPGSGKSTLVRALV-T-----------YRS-TVACTLGA......PYGSNLAFPGVT--SPG-LTQSLTDHETRILDEYQLGT----ES..----DLKPFNVLVGDPFQGNLH------LKAHYVKSF...-SHRVPRIICNFLQSLGYEIAGSK-----...-.PGELAQLPIYGPN-----PSGPTGQ---..-VLHLGPLSRRLTQSHGVC---.----..----SKLPSEVQGLEFEEVTLVYH--SS--EFE--...RNRVGFYIAATRALGRLNLIT
O55598_9VIRU/29-233 LVIHGVPGSGKSTLVKALI-L-----------NRS-TIAFTLGS......PYGQTLTHPGVEKFTKGRPIPNISHCETRILDEYQLSE----GS..----DTSPFNLLIGDPFQGTLH------LKAHYIKSH...-SYRVPAPICHFLRTLDYEIFGSR-----...-.PGEIVKLPVYSKN-----PTAPSGQ---..-VLHLGAASCSLTRRHNVH---.----..----SKSPADVQGLEFPEVTLVYH--ST--ERL--...RSRANFYIAATRALNRLCIIT
Q65667_9VIRU/938-1182 EYVKGGPGTGKSFLIRSLADPI-------R-DLVVAPFIKLRSDyqn...QRVGDELLSWDFHTPHKALDV--TGKQIIFVDEFTAYDWRLLAV..LAYRNHAHTIYLVGDEQQTGIQEGRGEGISILNKVDL...-SKVSTHVPIMNFRNPVRDVKVLNY----...-lFGSRMVPMSSVEKGFSFGDVKEFSSLSN.iPDTKIIHYSDETGEHMMPDYVR.----..-GVSKTTVRANQGSTYDNVVLPVLPS-DLNLINS-...--AELNLVALSRHRNKLTILL
Q05149_NVMV/89-314 GLVTGCAGSGKSRVLKEVYGD-------DSIILVPNKLMLDPYR......GKRVFTVWEMLTKGLEFSVRP----MRTLLVDEFTRYHLGEIFF..LAAKYGIRNVVLFGDHFQRSQR-RNGSILLASIPVLAhsnVSHRIPKHTQPLLVRFGFDIVCEG-----...-.KNKGVTELCHLYN-----EEIPYDY---..FVLAFSDKTASMLVEADIS---.----..----CQLVAGCQGREFDNVCLVVCGTDLVGID---...--QEELFVGLTRHKKSLRIMA
O72591_9VIRU/117-351 GIVLGAPGVGKSTSIKHILDTY-------GSRYKMVLCLPVKQLldg...VFSGRMDTFLIDDIFSRSVDY--GKYHTMLVDEITRVHMCEVLV..LAGYLGIKNVICFGDPAQ-GINFKAGSAVNYNFPVIA...-ECYSSRR----FGVATADLINSCN----...-gGGKSVVGNNDVKDNWTFEELCGKIE---..EMSTVLVATHATKEFLADD---.----..-GIEAVYYEDAQGMTYDVVTIVLKDEFDDDAICD-...--SNVRAVLLTRARKGGLLKV
Q65674_9VIRU/119-353 GIVLGAPGVGKSTSIKNLLDKF-------GAKHKMVLCLPFSQLleg...VFAGRLDTFLVDDLFCRSVGY--GKYNTMLVDEVTRVHMCEILV..LAGHLGVKNVICFGDPAQ-GLNYKAGSAVNYNFPIIA...-ECYASRR----FGKATADLINSSN----...-gGGKPVVGNNEVKDSWTFEELCGKIL---..DMSTVLVATRETQKFLLED---.----..-NIESILYSDAHGQTYDVVTIILEDEFDDAAICD-...--PNVRAVLLTRARKGGMIKM
Q83077_9VIRU/188-413 GIVSGVAGSGKST-LIRKLCS----------EADAMCVLANPRLket...DYKGQSKTFTLQQVLLSIVP---MTSDIVIVDEYTLAESAELLL..LQRKLQATFLVLFGDVAQ-GNAKTASSLEYLQFPVVF...-ISKTSHR----LGKHTAELCKKH-----...-.-GQAFEPGSPEEDEIIVADYLGAAD---..TTEKNIAFTKETVEDLRDA---.----..-GVEASLVLETQGKEYESVTLFIRES-DEAAMAD-...--SHLRAVALTRHRKKLIIRA
Q85079_9VIRU/323-547 GIVSGVPGCGKST-LVRKLLDS---------PISCYVALANPATer....DYRGTSNVMTLDDLLLAKVP---MSSDLLIVDEYTLAESAEILL..LQRRVRSSLVLLVGDVAQ-GRSNNASNIEYLTLPVIY...-RKITSHR----IGEETAKACSKQ-----...-.-GNRIRSAG-RKDKLILVDYEGETE---..ETEKNLAFTEETRDDVKDC---.----..-GYDCSLVSEVQGLEYESVTLFLRNT-DRAAASD-...--HHKRTVSMTRHKSLLIIRA
V58K_BSMV/265-489 GIISGVPGSGKST-IVRTLLKG---------EFPAVCALANPALmn....DYSGIEGVYGLDDLLLSAVP---ITSDLLIIDEYTLAESAEILL..LQRRLRASMVLLVGDVAQ-GKATTASSIEYLTLPVIY...-RSETTYR----LGQETASLCSKQ-----...-.-GNRMVSKG-GRDTVIITDYDGETD---..ETEKNIAFTVDTVRDVKDC---.----..-GYDCALAIDVQGKEFDSVTLFLRNE-DRKALAD-...--KHLRLVALSRHKSKLIIRA
Q85291_9VIRU/211-436 GAVTGVPGSGKTTLLRKVQCEG---------GFNSIVILGNPRSkt....EFSNLPSCYTAKEILLLGIA---IKCEVLLIDEYTLLTSGEILL..LQKITNSRIVILFGDRAQ-GSSNTLCSPEWLQVPVIF...-QSLTSRR----FGKATANLCRRQ-----...-.-GFDFEGGE-HEDKVVESPYEGSSP---..ATDINIVFSESTREDLLEC---.----..-GIESTLVSDVQGKEYKTVTLFIPDE-DREYLTN-...--AHLRSVAFSRHKFVLEIRC
O92516_9VIRU/230-455 GTISGVPGSGKTTLLRRIQTEA---------GLNSAVILGNPRHkv....SFSNLPSCYTAKEILLLRTE---AQFEVLLIDEYTLLTSGEILL..LQRIVRA-MVILFGDRAQ-GSSAYLGSPEWVQFPVIY...-QSDVSHR----FGKSTASLCGKQ-----...-.-GFDFKGGD-HEDEVEECDYEGSSSR--..ETDINLVVTEKTANDLLSC---.----..-GVSSSLVEDVQGKEYNSVTLFVLEC-DREKLAD-...--THLRSVAFTRHKTLLVIRI
Q65726_9VIRU/175-400 GSVTGVPGSGKTTLLRKIQTEA---------GLNSVVILANERHki....RFTQLPACYTAKEILLLRTA---IKYDVLLIDEYTLLQNGEILL..LQRILEAKVVVLFGDRAQ-GNSRTADSPEWLQIPVIY...-SSVKSRR----FGKATADFCGKQ-----...-.-GFDFEGCD-QEDEVQKLDFEGSSP---..ETDINLALTEATIEDLKEV---.----..-GIECSLVKDVQGNEYDSVSLFIREE-DRAALSD-...--PELRSVAFTRHRKLLIVRI
Q08317_9VIRU/189-413 GTVSGVPGSGKSTLLKNVQKKL----------KNSVCLLANKELkg....DFAGVPSVFSVEEMLLSAVP---SSFNVMLVDEYTLTQSAEILL..LQRKLGAKIVVLFGDREQ-GNTNKLTSPEWLHVPIVF...-SSDSSHR----FGPETAKFCEDQ-----...-.-GFSLEGRG-GEDKIVKGDYEGEGE---..DTEVNLCFTEETKADLAEV---.----..-QVEAFLVSSVQGRTFSSVSLFVREN-DKPVFSD-...--PHLRLVAITRHRKLLSIRA
POLN_HEVME/969-1183 QFTAGVPGSGKSKSVQQADVD---------------VVVVPTRE......LRNAWRRRG-FAAFTPHTAARV-TSGRRVVIDEAPSLPP--HLL.lLHMQRAAS-VHLLGDPNQIPAIDFEHTGLIPAIRPEL...-VPTSWWHVTHRCPADVCELVRGA-----...-.-Y-PKIQTTSKVL---RSLFWGEPA---..-VGQKLVFTQAAKAAHPGS---.----..-----ITVHEAQGATFTTTTIIATADARGL-IQS-...-SRAHAIVALTRHTEKCVILD
Q05983_RBDV/855-1113 KLVDGVTGCGKTTEIVRRYRPG-----ILILSVCKANVDEIRRK.....lAAVDSKFIRTVDSYLLSPSVTG--SCDELFIDEYGLSHPGILLL..AIHISGIRKVTLFGDSEQIPFCNRLADFPLKYNSVEDvglNFDREIRSTTYRCPQDITLSLQKMYKTKP...-.IKTVSTVESSITIKPIKSEFEIPLP-NAfdGPVLYICMTKHDESLLKLRWAKeN---..ISSEVRTVHAAQGLSYKNVVYFRLTRTDNDLYTKR...-KLPYHLVAISRHTDKIVYCT
Q65661_BMV/681-947 SMVDGVAGCGKTTAIKDAFRM---GEDLIVTANRKSAEDVRMALfpdtfnSKVALDIVRTADSAIMHGVPS----CHRLLVDEAGLLHYGQLLV..VAALSKCSQVLAFGDTEQISFKSRDAGFKLLHGNLKY...-DRRDVVHKTYRCPQDVIAAVNLLKRKCG.nrDtKYQSWTSESKVSRSLAKRRITSVLQVTI.dPNRTYLTMTQADKAALQTRAKDfPVSKdwIDGHIKTVHEAQGISVDNVTLVRLKSTKCDLFKH-...--EEYCLVALTRHKKSFEYCF
V125_AMVLE/834-1094 TIVDGVAGCGKTTNIKQIARSSGRDVDLILTSNRSSADELKETId...csPLTKLHYIRTCDSYLMSASAVK---AQRLIFDECFLQHAGLVYA..AATLAGCSEVIGFGDTEQIPFVSRNPSFVFRHHKLTG...--KVERKLITWRSPADATYCLEKYFYKNKk..-pVKTNSRVLRSIEVVP---INSPVSV-ER.nTNALYLCHTQAEKAVLKAQTHLkGCDN..----IFTTHEAQGKTFDNVYFCRLTRTSTSLATGRdpiNGPCNGLVALSRHKKTFKYFT
P89033_9BROM/766-1025 TIMDGVAGCGKTTKIKSIASMVGDDIDLLLTSNRSSAIELKEAVe...gsQLVKSRFIRTCDSYLMTNNAPK---AKKMLFDECFMQHAGVIYA..AATIAGVSEVIAFGDTEQIPFISRNDMFLLKHHVLKG...--DHVKQTITYRNPADTVYALSKFFYRKKt..-pVKTKRHILRSIKVKP---INALSQV-EV.dASAVYVTHTQAEKASLLATPSFkSCK-..----IYTTHEVQGGSFDKVIFVRLTRTSNHLYSGKhpiMGACHGLVALSRHKSEFIYYT
O57161_9BROM/771-1024 VIEDGVAGCGKTTSLLKQAKP---DSDLLLAANRETANDAKASGv...ipKALEYR-VRTVDSYLMLRTWFT---AERLLVDECFLVHAGLVYA..AATLARVKEVIAFGDTKQIPFVSRIPTVKLRHASVVG...--TLKPRTITYRCPRDVTAVLSEKFYGTK...-.VKTFNLVKQSLELKN---IDSSTEI-PV.eKDTLYIAHTQADKHALMRLPGMnGIE-..----VLTTHEAQGKTRDHVILVRLSKTTNLLYSGKmpdAGGSHNLVGLSRHKKSLRYFS
Q66108_9BROM/761-1014 IIEDGVAGCGKTTSLLKQAKI---ESDMLLSANRETARDARESGa...ipDVLKYR-VRTLDSYLMLKKWFT---ADRLLVDECFLVHSGIIYA..AATLGQVKEIIAFGDTKQIPFVSRIPTFSLKHPSIRG...--KLKPKTITYRCPRDATAVLSEKFYETN...-.VKTFNPTSSSLSLID---ISSSMEI-PA.eKDTLYIMHTQADKCAMLRHPGInPDN-..----VMTTHEAQGKTFNHVILVRLSKPTNLLYSGKmpdAGPSHNLVGLSRHKSTLRYYS
Q84701_PEBV/959-1215 KLVDGVPGCGKSTMIVNTANP---VFDVVLSTCKEATEDLLEKFa.akkfGINLKKRVKTVDSFLMHCSDGN-CVGDLLHFDEALMAHAGMVFF..CAQIAKAKKVICQGDQKQIAYKPRVS--QLTLRFTSLigrFDEVEEKRMSYRCPVDVALTLDR---FYTg..-kVVTKNSVLRSMDVK--R--IGSKEQVEM.eHGIQYLTFLQSEKK-DIANLLCqRKVK..--SFVNTVHEAQGKTFKKVRLVRLKPTDDVLARG-...--QEYQIVALSRHTQSLVYET
Q84918_9VIRU/892-1148 KLVDGVPGCGKSTAIVESANP---LFEVILSMGKEATEDLIARFs.kkkfGINIKKRVRTVDAFLMHCSNGE-CIGETLHFDEALMAHAGMVFF..CAQLAKAKLVVCQGDQKQIAYKPRVA--QVNLKFLSLvgrFDEVEEKRLTYRCPIDVALSLDR---FYTg..-kVVTKNNVLRSMTTK--R--ISSKEQVTM.eKGVQYLTFLQSEKK-EIATMLAlRKIE..--AAVNTVHEAQGKTFKKVILVRTKVTDDVLARG-...--QEYRIVAISRHTQAMVYET
194K_TRVSY/900-1156 ELVDGVPGCGKSTMIVNSANP---CVDVVLSTGRAATDDLIERFa.skgfPCKLKRRVKTVDSFLMHCVDGS-LTGDVLHFDEALMAHAGMVYF..CAQIAGAKRCICQGDQNQISFKPRVS--QVDLRFSSLvgkFDIVTEKRETYRSPADVAAVLNK---YYTg..-dVRTHNATANSMTVR--K--IVSKEQVSL.kPGAQYITFLQSEKK-ELVNLLAlRKVA..--AKVSTVHESQGETFKDVVLVRTKPTDDSIARG-...--REYLIVALSRHTQSLVYET
O93163_9VIRU/977-1239 TLIDGVPGCGKSTHIVKEARL---ENQYVLTMGREAAAELRERFktvrgsTEEQLKRVRTVDSFLMNDKDS---RAKILHFDEALMAHAGMVYF..CADNLSARTIICQGDSQQIPFINRVE--SITLEYAKL..eITNVVEKRLTYRSPLDVACFLTRKNFYWHf..-hCYERKSNGRSISVVGPRDGMTSNYSIPK.kKGAQYLTFTQSEKE-DMVRYLG.-KGQ..--WSVNTVHESQGKTYDDVILVRLKPTDNEIYPGGr..KSKPYVVVGTTRHRRSLVYYT
RRPO_SHMV/845-1099 TLVDGVPGCGKTQEILSRFDA---NSDLILVQGREACEMIRRRAndnvp.GSATKENVRTFDSFVMNRKPGK---FKTLWVDEGLMVHPGLINF..CINISCVSSVYIFGDRKQIPFINRVMNFSIPDNLAKL..yYDEIVSRDTTKRCPLDVTHFLNS---VYEk..-rVMSYSNVQRSLECKMISGKAKINDYRSI.lAEGKLLTFTQEDKEYLLKAGFKdV---..-----NTVHEAQGETYRDVNLIRVTATPLTIVSA-...-GSPHVTVALSRHTNRFVYYT
RRPO_CGMVS/859-1113 TLVDGVPGCGKTAEIIARVNW---KTDLVLTPGREAAAMIRRRAcalhksPVATNDNVRTFDSFVMNRKIFK---FDAVYVDEGLMVHTGLLNF..ALKISGCKKAFVFGDAKQIPFINRVMNFDYPKELRTL..iVDNVERRYVTHRCPRDVTSFLNT---IYKa..-aVATTSPVVHSVKAIKVSGAGILRPE-LT.kIKGKIITFTQSDKQSLIKSGYNdV---..-----NTVHEIQGETFEETAVVRATPTPIGLIAR-...-DSPHVLVALTRHTKAMVYYT
RRPO_TVCV/823-1076 ILVDGVPGCGKTKEIIEKVNF---SEDLILVPGKEASKMIIRRAnqagv.IRADKDNVRTVDSFLMHPSRRV---FKRLFIDEGLMLHTGCVNF..LLLLSQCDVAYVYGDTKQIPFICRVANFPYPAHFAKL..vADEKEVRRVTLRCPADVTYFLNK---KYDg..-aVMCTSAVERSVKAEVVRGKGALNPI-TL.pLEGKILTFTQADKFELLEKGYKdV---..-----NTVHEVQGETYEKTAIVRLTSTPLEIISS-...-ASPHVLVALTRHTTCCKYYT
Q84124_9VIRU/822-1081 TLVDGVLGCGKTKEILETVNF---DEELILVPGKEACKMIIKRAnksgh.VRATKDNVRTVDSFLMHLKPKT---YNKLFIDEGLMLHTGCVNF..LIALSHCREAMVFGDTEQIPFINRVANFPYPKHFGHT..cLHRREVRRLSLRCPADVTHFMNS---KYDg..-kFLCTNDVIRSVDAEVVRGKGVFNPK-SK.pLKGKIITFTQSDKAELNERGYEeVSTF..--GEINTVHEIQGETFEDVSVVRLTPTALELISK-...-SSPHVLVALTRHTKSFKYYC
RRPO_TMOB/828-1084 TLVDGVPGCGKTKEILRRVNF---SEDLVLVPGKEAAAMIRKRAnqsgn.IVANNDNVKTVDSFLMNLGKGPVCQFKRLFVDEGLMLHPGCVYF..LVKLSLCNEAFVFGDTQQIPYINRVQNFPFPQHFSKL..iVDETEKRRTTLRCPVDVTHFLNQ---CYDg..-aVTTTSKTQRSVGLEVVGGAAVMNPV-TK.pLKGKIVTFTQSDKLTMLSRGYQdV---..-----NTVHEIQGETYEEVSLVRLTPTPIHIISR-...-ESPHVLVGLTRHTRCFKYYT
RRPO_PMMVS/831-1086 TLVDGVPGCGKTKEILSRVNF---DEDLVLVPGKQAAEMIRRRAnssgl.IVATKENVRTVDSFLMNYGRGP-CQYKRLFLDEGLMLHPGCVNF..LVGMSLCSEAFVYGDTQQIPYINRVATFPYPKHLSQL..eVDAVETRRTTLRCPADITFFLNQ---KYEg..-qVMCTSSVTRSVSHEVIQGAAVMNPV-SK.pLKGKVITFTQSDKSLLLSRGYEdV---..-----HTVHEVQGETFEDVSLVRLTPTPVGIISK-...-QSPHLLVSLSRHTRSIKYYT
RRPO_TMV/829-1085 VLVDGVPGCGKTKEILSRVNF---DEDLILVPGKQAAEMIRRRAnssgi.IVATKDNVKTVDSFMMNFGKSTRCQFKRLFIDEGLMLHTGCVNF..LVAMSLCEIAYVYGDTQQIPYINRVSGFPYPAHFAKL..eVDEVETRRTTLRCPADVTHYLNR---RYEg..-fVMSTSSVKKSVSQEMVGGAAVINPI-SK.pLHGKILTFTQSDKEALLSRGYSdV---..-----HTVHEVQGETYSDVSLVRLTPTPVSIIAG-...-DSPHVLVALSRHTCSLKYYT
Q67704_9VIRU/923-1149 LTAFGFAGSGKSHWCQTILKHCSVEK---VLVISPRKVLRDDWV......-AKISKKHR-VVTFEVAFMDD--YGCKDIVIDEIGLLPPGYIDL..VIAAHQPRTLVLLGDPLQSTYHSKRDNVVLEASQEDV...-FNRVRGKLPYLCYSHRLPRNCK------...-.-LFEIECMGAESEKR--VVYRSNRLKDE..-PTICATRAM--KEEKGSG---.----..----WYTVSETQGLSFKSCLIYLDEHWAKK-----...-EDEDVMVALTRSRGEIGIHV
Q96806_9VIRU/921-1144 HLTLGFAGSGKSFYPQCVLKNSHYAN---SLVIVPRKALCSDWS......-NKVHPDVK-VVTFESAFRQQK-KGYGLIVIDEIGLLPPGYIDM..VHGYFCYDSLLVLGDPLQCEYHSKADHFFLGQ-EESV...-FKKFKGHCNYLYKSHRLPRNQK------...-.-LFEIECDGAEGEG---VTFNKPRAKD-..-LTLCASQRR--KDSEKD----.----..----VNTVGESQGLSANRVNILLDKDWSLV-----...-NDETVIVAFTRARKEINIIG
P89920_9VIRU/925-1156 IHIAGFPGCGKTHPITKLLHTAAF--R-DFKLAVPTTELRSEWKe....lMKLSPSQAWRFGTWESSLLKS----ARILVIDEIYKLPRGYLDL.aIHSDSSIEFVIALGDPLQGEYHSTHPSSSNSRLIPEV...-SHLAPYLDYYCLWSYRVPQDVAA-----...-.-FFQVQSHNPALG----FARLSKQFPTT.gRVLTNSQNSMLTMTQCGYSA--.----..----VTIASSQGSTYSGATHIHLDRNSSLL-----...-SPSNSLVALTRSRTGVFF--
POLR_OYMV/895-1128 IHIAGFPGCGKSHPIQKLLQTPAF--R-HFRLSVPTNELRSEWKr....dLNLPESEVWRLCTWETALFKS----SNILVVDEIYKLPRGYLDL.iLLADPSIQLVIMLGDPLQGEYHSSHPSSSNSRLESET...-TRLSKYIDCYCWWTYRCPKAVAD-----...-.-LFGVKTFNSNEG----FIRAVLSHPPN.lPNLVNSIATANTMQSLGHHA--.----..----LTISSSQGMTYSDPVTVLLDRHSLLI-----...-TPQTALVALTRSRSGIYFIG
O91260_PHMV/1057-1291 IHISGFAGCGKTHPIQHLLKTRPFL-H-NLRLSTPTNELRSEWKr....dMRPTPENIWRFSTWESLLFKH----SEILVIDECYKCPR-YHHLhsILADPTLQTVILLGDPLQGEYHSNNPHSTNHPLPSEV...-LRFASYIDCYCWWTYRLPIKTAN-----...-.-LFHIPTFSKQPG----VITTSHTHPNQ.sKNLVNSIPTATAMNQMGHHA--.----..----ITISSSQGGTYDEINTILLDRNTNLL-----...-SPNNCLVALTRSKKGFMFVG
POLR_EPMV/961-1193 IHIAGFAGCGKTHPIQKLLQTSPF--H-DFRISCPTNELRSEWKr....dMQPTAENVWRFSTWESSLLKH----SEILVIDEIYKLPRGYLDL.sILADPTLSLVIILGDPLQGEYHSTSPHSSNHFLPSEV...-HRFKSYIDCYCFWSHRIPKQIAS-----...-.-LFGVVCHNTNEG----FVRALTSHPPN.sKNLTNATNTALSLQQMGHHA--.----..----ITISARR-VTFTEAHTILLDRHTNLL-----...-SPNNCLVALTRSRTGVYFVG
O56254_TYMV/972-1205 VHFAGFAGCGKTYPIQQLLKTKLF--K-DFRVSCPTTELRTEWKt....aMELHGSQSWRFNTWESSILKS----SRILVIDEIYKMPRGYLDL.sILADPALELVIILGDPLQGEYHSQSKDSSNHRLPSET...-LRLLPYIDMYCWWSYRIPQCIAR-----...-.-LFRIHSFNAWQG-VIGSVSTPHDQSP-..-VLTNSHASSLTFNSLGYRS--.----..----CTISSSQGLTFCDPAIIVLDNYTKWL-----...-SSANGLVALTRSRSGVQFMG
POLR_KYMVJ/998-1235 FHLAGFAGCGKTKPLQSLLSTRPF--H-SFRVSTPTTELRNEWKk....dMNLPASQAFRFCTWESSLLKQ----TKILVIDEIYKLPRGYLDL.cILADPCLELVIILGDPLQGEYHSTSPHSSNHQLQSET...-TRLLPFIDHYCWWTYRVPSHIAD-----...-.-LFSVPSFNRSEGHYQMAVRTADSYTPG.hFNLVNSVATANAVIQLGFPA--.----..----TTISASQGVTHHNRVTILLDKHSRLL-----...-SPSNTLVALTRSTVGVEFLG
O37153_9VIRU/659-893 VVIHGAGGCGKSYAIQKWLRSCSDPC--AATVVCPTLELRNDWL......NKIGSYEQTNIKTFEKALIQP---VNNVVIFDDYTKLPPGYIET.mVYHHHNLDLIILTGDPMQSAYHETNRDAYISLIPDAS...-AIFSEYCEFNINATHRNVAELAC-----...-.-LLGVYSERQGKL---TVSFSTAPLSKGkvPILVPSRMKQEAFADVGNR---.----..----CMTYAGCQGLTAPKIQILIDNHTTFC-----...-SEQTLYTCLSRAVDQIHFIN
RRPO_PVXCP/731-964 CVIHGAGGSGKSHAIQKALREIGKGS--DITVVLPTNELRLDWS......KKVPNTEPYMFKTYEKALIGG---TGSIVIFDDYSKLPPGYIEA.lVSFSTKIKLIILTGDSRQSVYHETSDDASIRHLGPAT...-EVFAKYCRYYLNATHRNKKDLAN-----...-.-MLGVYSERTGTT---EISMSSEFL-EG.vPTLVPSDEKRRLYMGTGRND--.----..----TFTYAGCQGLTKPKVQIVLDHNTQVC-----...-SANVMYSALSRATDRIHFIN
RRPO_SMYEA/601-834 CVIHGAGGSGKSQRLQDWMRSLKKNSR-ECTVILPTAELRTDWV......NKVPKQSLDTFKTWEKGLVQP---PNRVVILDDYGKLPAGYPEA.lCANYPNIELLILTGDSRQSVHNEHNKQAATASLESNI...-EFWTQYCRFYVNATHRNVKRLAN-----...-.-ALGVYGERDEPL---KVTCSSHVY-DG.wPVLAPGLLKAGNLAECGRR---.----..----AFTYAGCQGLTAPRVQILLDNDTPLC-----...-SQRVMYTALSRAVNEIHFVN
RRPO_FXMV/599-830 AVLHGAGGSGKSYALQEFMRNNSDTP---ITVILPTNELRADWK......KKLPAHDKDTFMTYENALLCP---RGDIFIMDDYTKLPRGYIEA.fVQNAPALSLLILTGDPNQAEHFETTEDNEINSLAPAS...-VVFGKFSRYHINATHRNPRNLAN-----...-.-ALGVYSETPGEV---KVLYTRNIK-TG.yHNLVPSQMKMRNYASLGQR---.----..----ASTYAGCQGITAPRVQIILDSDTPRC-----...-TRQVMYTALSRATTEVVLCN
Q65005_9VIRU/633-864 SVIHGAGGSGKSRALQEYMRNNKEDP---IVTILPTNELRADWK......AKLPAHDPDMFMTFENALLIP---KGNVVIMDDYTKLPRGYIEA.yVQNSPMLDLLILTGDPRQSEHFESAEGNTINDLSPSP...-VVFSAYARYYINATHRNNQDLAN-----...-.-ALGVYSEKQGKT---RISVSNHIE-DG.rHTLVPSQIKQRNYVSMGRK---.----..----TSTYAGCQGITASRVQVIIDNDTAKC-----...-SHQVLYTAFSRAADEIHFCN
Q65974_9VIRU/731-962 SVIHGAGGSGKSAALQDLLRDHPELP---IQVILPTNELRMDWL......SKLPRNRPENFRTFEKAYLQT---NAPSIIMDDYGKLPQGYVEA.fAVTHPNVELIVLTGDNKQSVHHETNEQAMIAQLEPST...-QIFSQFSRYYINATHRNAKKLAN-----...-.-MLGVYSDNNKEL---KITHGFQPI-KD.iHLLVPSLIKKAAFSEAGHK---.----..----TSTYAGCQGITARKLQILLDSNTPMC-----...-SQEVLYTALSRAVDSIHFIN
RRPO_P1AMV/661-892 SVIHGAGGSGKSQALQTLLRQDHSLP---IEVVLPTNELRLDWL......KKLPHNPPEQFRTFERAFVSS---HSPVVIFDDYGKLPQGYLEA.fALTHANLELVILTGDPRQSTHHESNEEALISKLPPAT...-TIYSAFSRYYINATLRNSKFLAN-----...-.-KLGVYSANSCPL---NVTYGFQPL-PG.lHLLVPSLMKKAAFTDAGHK---.----..----VSSYAGCQGITAPKVQILLDNDTTMC-----...-TKEVLYTALSRAVDSIHFVN
RRPO_SHVX/911-1143 LAIHGAGGAGKSRALQELLRSSPELAD-SINIVVPTINLANDWK......AKLPQMDPRRVMTFQKACERE---CKSVTIFDDYGKLPAGFVDA.yLAIKVNVELAILTGDQRQSTHHQER-ESQISSLQSNI...-AQFSKYADYYLNATHRQPRRLAN-----...-.-PIKVHAERQLGG---AVLKANIVP-DL.aMVLVPAFRSQSLLTDLGRH---.----..----AMTYAGCQGLTLNHLTIILDKDTPLC-----...-SDEVLYTAFSRASESITFVN
O09498_9VIRU/744-977 IVIHGAGGAGKSRALQEILRSNSIDTN-QVNIIVPTINLAVDWK......KKLPKIDPRRVMTFEKACERE---GKSVVIMDDYGKLPAGYIDA.yLAIKFNVEIVILTGDQRQSVFHNDRKDSQIALLTSNT...-AHFKRYCDYYLNATHRQPRRLAN-----...-.-PIRVHAEREVGG---AIKHSTLIP-TH.aMTLVPAFRSQSLLTDLGRQ---.----..----AMTYAGCQGLTLPHLTIVLDKDTPLC-----...-SDEVLYTALSRASETITFVN