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Protein and Associated NucleotideDomains with Inferred Trees

PF01443 phylogeny
for nucleotide alignment


 
((((Q65667_9VIRU/938-1182,(Q05149_NVMV/89-314,(((((O09498_9VIRU/744-977,RRPO_SHVX/911-1143),(O37153_9VIRU/659-893,(RRPO_PVXCP/731-964,((RRPO_SMYEA/601-834,(Q65005_9VIRU/633-864,RRPO_FXMV/599-830)),(RRPO_P1AMV/661-892,Q65974_9VIRU/731-962))))),(POLR_OYMV/895-1128,((POLR_EPMV/961-1193,O91260_PHMV/1057-1291),((O56254_TYMV/972-1205,P89920_9VIRU/925-1156),POLR_KYMVJ/998-1235)))),(Q96806_9VIRU/921-1144,Q67704_9VIRU/923-1149)),(((O55598_9VIRU/29-233,VHEL_SHVX/26-227),((O09499_9VIRU/26-227,O55600_9VIRU/33-234),O55602_9VIRU/29-231)),(((((VHEL_WCMVO/24-228,VHEL_SMYEA/25-221),((O37154_9VIRU/26-224,VHEL_NMV/26-224),Q86822_PAMV/28-230)),VHEL_LVX/23-216),((((Q65007_9VIRU/27-230,VHEL_FXMV/27-229),VHEL_PMV/24-222),VHEL_P1AMV/24-223),(VHEL_PVXX3/25-224,Q65975_9VIRU/24-224))),(((Q67552_9VIRU/24-228,Q67655_9VIRU/24-227),((VHEL_PVSP/24-219,(Q83086_LSV/24-220,VHEL_PVMR/24-221)),VHEL_CVB/24-223)),(O91633_9VIRU/24-221,(O91902_9VIRU/24-221,Q64963_9VIRU/24-222)))))))),(((((Q65661_BMV/681-947,Q05983_RBDV/855-1113),((Q66108_9BROM/761-1014,O57161_9BROM/771-1024),(P89033_9BROM/766-1025,V125_AMVLE/834-1094))),(O93163_9VIRU/977-1239,(194K_TRVSY/900-1156,(Q84918_9VIRU/892-1148,Q84701_PEBV/959-1215)))),((((RRPO_TMV/829-1085,RRPO_PMMVS/831-1086),RRPO_TMOB/828-1084),(Q84124_9VIRU/822-1081,RRPO_TVCV/823-1076)),(RRPO_CGMVS/859-1113,RRPO_SHMV/845-1099))),POLN_HEVME/969-1183)),((Q08317_9VIRU/189-413,((V58K_BSMV/265-489,Q85079_9VIRU/323-547),Q83077_9VIRU/188-413)),(Q65726_9VIRU/175-400,(O92516_9VIRU/230-455,Q85291_9VIRU/211-436)))),Q65674_9VIRU/119-353,O72591_9VIRU/117-351);
((((Q65667_9VIRU/938-1182:0.77840,(Q05149_NVMV/89-314:0.66540,(((((O09498_9VIRU/744-977:0.22093,RRPO_SHVX/911-1143:0.27656):0.28251,(O37153_9VIRU/659-893:0.32923,(RRPO_PVXCP/731-964:0.39364,((RRPO_SMYEA/601-834:0.36384,(Q65005_9VIRU/633-864:0.23733,RRPO_FXMV/599-830:0.25342):0.15304):0.06937,(RRPO_P1AMV/661-892:0.19775,Q65974_9VIRU/731-962:0.31327):0.10745):0.05989):0.04903):0.09650):0.23984,(POLR_OYMV/895-1128:0.18267,((POLR_EPMV/961-1193:0.23026,O91260_PHMV/1057-1291:0.23279):0.09729,((O56254_TYMV/972-1205:0.26546,P89920_9VIRU/925-1156:0.29870):0.06423,POLR_KYMVJ/998-1235:0.27580):0.01655):0.06328):0.43604):0.20373,(Q96806_9VIRU/921-1144:0.33740,Q67704_9VIRU/923-1149:0.42532):0.18241):0.31681,(((O55598_9VIRU/29-233:0.32736,VHEL_SHVX/26-227:0.17338):0.16153,((O09499_9VIRU/26-227:0.23106,O55600_9VIRU/33-234:0.22377):0.17432,O55602_9VIRU/29-231:0.23244):0.04138):0.34008,(((((VHEL_WCMVO/24-228:0.46723,VHEL_SMYEA/25-221:0.59582):0.10109,((O37154_9VIRU/26-224:0.49512,VHEL_NMV/26-224:0.61909):0.11924,Q86822_PAMV/28-230:0.67680):0.12559):0.09838,VHEL_LVX/23-216:0.49472):0.07375,((((Q65007_9VIRU/27-230:0.30336,VHEL_FXMV/27-229:0.39858):0.17772,VHEL_PMV/24-222:0.45696):0.06361,VHEL_P1AMV/24-223:0.33056):0.07182,(VHEL_PVXX3/25-224:0.60629,Q65975_9VIRU/24-224:0.34832):0.06312):0.18005):0.12094,(((Q67552_9VIRU/24-228:0.12988,Q67655_9VIRU/24-227:0.19578):0.49434,((VHEL_PVSP/24-219:0.36945,(Q83086_LSV/24-220:0.34723,VHEL_PVMR/24-221:0.38856):0.10876):0.11844,VHEL_CVB/24-223:0.34080):0.12058):0.12829,(O91633_9VIRU/24-221:0.39389,(O91902_9VIRU/24-221:0.46581,Q64963_9VIRU/24-222:0.36732):0.07303):0.11885):0.05412):0.18666):0.28064):0.16461):0.30668):0.08369,(((((Q65661_BMV/681-947:0.56009,Q05983_RBDV/855-1113:0.55151):0.12142,((Q66108_9BROM/761-1014:0.22584,O57161_9BROM/771-1024:0.14613):0.27894,(P89033_9BROM/766-1025:0.32247,V125_AMVLE/834-1094:0.28362):0.11166):0.14686):0.08402,(O93163_9VIRU/977-1239:0.37032,(194K_TRVSY/900-1156:0.20148,(Q84918_9VIRU/892-1148:0.22756,Q84701_PEBV/959-1215:0.16142):0.10919):0.20847):0.18594):0.05673,((((RRPO_TMV/829-1085:0.21473,RRPO_PMMVS/831-1086:0.21612):0.06208,RRPO_TMOB/828-1084:0.22634):0.08396,(Q84124_9VIRU/822-1081:0.26134,RRPO_TVCV/823-1076:0.21299):0.10581):0.09382,(RRPO_CGMVS/859-1113:0.28740,RRPO_SHMV/845-1099:0.37825):0.08019):0.13870):0.26001,POLN_HEVME/969-1183:0.88115):0.18626):0.19628,((Q08317_9VIRU/189-413:0.32766,((V58K_BSMV/265-489:0.24503,Q85079_9VIRU/323-547:0.31472):0.14686,Q83077_9VIRU/188-413:0.29846):0.13489):0.07325,(Q65726_9VIRU/175-400:0.19567,(O92516_9VIRU/230-455:0.27381,Q85291_9VIRU/211-436:0.25376):0.11206):0.14491):0.17462):0.44687,Q65674_9VIRU/119-353:0.13510,O72591_9VIRU/117-351:0.22639);