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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01429 alignment
(18 sequences with 152 aa)


MBD1_MOUSE/1-72 MAESWQDCPALGPGWKRRESFRKSGASF-................---GRSDIYYQS...........P-TGEKIRSKVELTRYLGPACD-------------.......----------------------------LTLFDFRQGTLCHP
Q9PUM9_XENLA/1-71 MEKKRWECSAL-QGWKKEEVTRRSGLSA-................---GKSDVYYYS...........P-SGKKFRSKPQLARYLGNSMD-------------.......----------------------------LSTFDFRTGKMLMS
Q9YGC6_XENLA/91-166 DRGPMYEDPTLPEGWTRKLKQRKSGRSA-................---GKFDVYLIN...........P-NGKAFRSKVELIAYFQKVGD-------------.......------------------------TSLDPNDFDFTVTGRGSP
MBD4_HUMAN/76-151 ATAGTECRKSVPCGWERVVKQRLFGKTA-................---GRFDVYFIS...........P-QGLKFRSKSSLANYLHKNGE-------------.......------------------------TSLKPEDFDFTVLSKRGI
Q9SNC0_ARATH/25-137 KRATPGDDNWLPPDWRTEIRVRTSGTKA-................---GTVDKFYYE...........PITGRKFRSKNEVLYYLEHGT-PKKKSVKTAENGD.......SHSEHSEGRGSARRQTKSNKKVTEPPPKPLNFDFLNVPEKVT
Q9VGA4_DROME/445-519 KPTVIVQDWRLPPGWIKHMYQRS------................NVLGKWDVILVS...........P-SGKRFRSKSDLKLFLESQNL-------------.......-----------------------VYNPDVYDFSIHRRRAKDI
Q9VHB7_DROME/9-100 IERKRVDCSVLPKGWQRDEV-RKSGSSANnnassnnnssatassnNNNNKVDVFYYS...........P-TGKRAEGKPQDIAIPDFQ---------------.......-------------------------PGKMPHCALPSPSISLY
Q9V424_DROME/9-126 IERKRVDCSVLPKGWQRDEV-RKSGSSANnnassnnnssatassnNNNNKVDVFYYSralrtdvslvpP-IRQTASIFKQPVTVIRNHKQ-------------.......------------DPAKAKNEPKHGTREKPKQLFWEKRLERLR
O49655_ARATH/104-177 WVIDKPGLPRTPRGFKRSLILRKD-----................--YSKMDAYYIT...........P-TGKKLKSRNEIAAFIDANQD-------------.......-----------------------YKYALLGDFNFTVPKVMEE
Q9SLR5_WHEAT/1-107 ------NPDGLPKGWVKELVFRKCNDG--................---IRKDPYYTD...........PVSHLLFRTLKSVISYLQTGEISRHAYLPRRSVTD.......IYSFDGCADLPRKMLKRLKVPGKKKQKSVQSLVFEKKLPDDQ
Q9VCG5_DROME/35-106 RKTATSYNGNLAPGWRRLT----------................---NNNEVAYIS...........P-SGKTLRTQFQIKDYLLTQGT-------------.......-------------------CKCGLPCPLRPEYLFDFNAQVPN
SETB1_HUMAN/594-668 YRGKNPLLVPLLYDFRRMTARRRVNRKM-................----GFHVIYKT...........P-CGLCLRTMQEIERYLFETG--------------.......-----------------------CDFLFLEMFCLDPYVLVDR
YNCA_CAEEL/824-900 FHRNSPIHTPLLCGWRRIMYTMSTGKKR-................-GAVKKNIIYFS...........P-CGAALHQISDVSEYIHVTRS-------------.......-------------------------LLTIDCFSFDARIDTAT
Q23590_CAEEL/323-398 KTNEAMLRLPLQLGWRRQTCVRSIASAG-................---VKGDVSYFA...........P-CGKKLSTYSEVVRYLTKNS--------------.......-----------------------IHYITRDNFLFNTKLVIGE
BAZ2A_HUMAN/519-593 IATPEEVRLPLQHGWRREVRIKK-GSHRW................----QGETWYYG...........P-CGKRMKQFPEVIKYLSRNL--------------.......-----------------------VHSVRREHFSFSPRMPVGD
BAZ2B_HUMAN/543-617 VTDERELRIPLEYGWQRETRIRNFGGR--................---LQGEVAYYA...........P-CGKKLRQYPEVIKYLSRNG--------------.......-----------------------IMDISRDNFSFSAKIRVGD
Q9SGH2_ARATH/258-374 RHFISERHGVLEDGWRVEFRQPLNG----................---YQLCAVYCA...........P-NGKTFSSIQEVACYLGLAINGNYSCMDAEIRNEnsllqerLHTPKRRKTSRWPNNGFPEQKGSSVSAQLRRFPFNGQTMSPF
Q9XI36_ARATH/4-77 TDELVSIELPAPASWKKLFYPKRAGTP--................---RKTEIVFVA...........P-TGEEISSRKQLEQYLKAHPG-------------.......-------------------------NPVISEFEWTTGETPRR