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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF01413 - C4)
C-terminal tandem repeated domain in type 4 procollagen
(Pfam reference: accession no. PF01413)
(Interpro reference: accession no. IPR001442)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
26 sequences @ 118 aa
(ave. pairwise identity: 0.49)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 8.79)
nucleotides
(available for above)
24 sequences @ 354 bp
(ave. pairwise identity: 0.51)
New Hampshire format
(total tree length: 7.95)
amino acids, restricted set
(corresp. to available nt seqs)
24 sequences @ 118 aa
(ave. pairwise identity: 0.48)
New Hampshire format
(total tree length: 8.51)