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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF01410 - COLFI)
Fibrillar collagen C-terminal domain
(Pfam reference: accession no. PF01410)
(Interpro reference: accession no. IPR000885)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
12 sequences @ 227 aa
(ave. pairwise identity: 0.49)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 5.06)
nucleotides
(available for above)
10 sequences @ 681 bp
(ave. pairwise identity: 0.56)
New Hampshire format
(total tree length: 3.13)
amino acids, restricted set
(corresp. to available nt seqs)
10 sequences @ 227 aa
(ave. pairwise identity: 0.50)
New Hampshire format
(total tree length: 3.94)