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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01398 phylogeny
for restricted amino acid alignment


 
(((((((O27052_METTH/17-118,(O28085_ARCFU/2-93,O58174_PYRHO/2-96)),O59157_PYRHO/26-138),Y1369_MYCBO/6-114),(P73582_SYNY3/2-121,O67597_AQUAE/2-103)),(O75965_HUMAN/2099-2205,(O15731_DICDI/262-371,O95630_HUMAN/252-361))),(((((Q18967_CAEEL/2-117,((IF35_ARATH/23-133,O43060_SCHPO/18-129),IF35_HUMAN/87-196)),(CSN6_HUMAN/36-148,(CSN6B_ARATH/6-136,O82466_ORYSA/51-165))),(PSD7_ARATH/12-125,((PSD7_DROME/5-120,O61792_CAEEL/36-151),(RPN8_SCHPO/12-125,(RPN8_YEAST/2-115,O13386_TRIRE/11-125))))),(O01974_CAEEL/10-139,IF33_HUMAN/34-146)),((YPT5_CAEEL/24-137,(O00850_DICDI/26-139,(RPN11_SCHPO/25-138,O16155_SCHMA/21-128))),(((Q12468_YEAST/81-205,CSN5_CAEEL/51-165),CSN5B_ARATH/54-168),CSN5_SCHPO/30-144)))),C61A_HUMAN/7-148,C61A_MOUSE/7-148);
(((((((O27052_METTH/17-118:0.87430,(O28085_ARCFU/2-93:0.52863,O58174_PYRHO/2-96:0.89262):0.31766):0.38017,O59157_PYRHO/26-138:1.73134):0.02378,Y1369_MYCBO/6-114:1.42443):0.30999,(P73582_SYNY3/2-121:1.38500,O67597_AQUAE/2-103:0.52541):0.51294):0.31679,(O75965_HUMAN/2099-2205:1.26238,(O15731_DICDI/262-371:0.27527,O95630_HUMAN/252-361:0.45258):0.52873):0.31751):0.30462,(((((Q18967_CAEEL/2-117:0.79400,((IF35_ARATH/23-133:0.38928,O43060_SCHPO/18-129:0.51034):0.11513,IF35_HUMAN/87-196:0.35597):0.14831):0.09072,(CSN6_HUMAN/36-148:0.61557,(CSN6B_ARATH/6-136:0.12708,O82466_ORYSA/51-165:0.73662):0.21990):0.78719):0.12813,(PSD7_ARATH/12-125:0.23635,((PSD7_DROME/5-120:0.15407,O61792_CAEEL/36-151:0.16692):0.19138,(RPN8_SCHPO/12-125:0.21512,(RPN8_YEAST/2-115:0.30977,O13386_TRIRE/11-125:0.10190):0.06521):0.16659):0.04174):0.41915):0.57859,(O01974_CAEEL/10-139:0.67462,IF33_HUMAN/34-146:0.64984):0.69232):0.40837,((YPT5_CAEEL/24-137:0.09648,(O00850_DICDI/26-139:0.12232,(RPN11_SCHPO/25-138:0.05776,O16155_SCHMA/21-128:0.51188):0.09997):0.05931):0.21959,(((Q12468_YEAST/81-205:0.57759,CSN5_CAEEL/51-165:0.16585):0.09367,CSN5B_ARATH/54-168:0.15386):0.11641,CSN5_SCHPO/30-144:0.33680):0.43959):0.22268):0.09756):0.84599,C61A_HUMAN/7-148:0.25631,C61A_MOUSE/7-148:0.19586);