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PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF01398 alignment |
| O82466_ORYSA/51-165 | SSGLTFKLHPLVIVNVSDHHTRVKAQaa..................csgDGASSAAAGGQAAEGVrvrdrg...........aaradgGDLQQLRARPRPCLRDPRP---RLLEKK-----QELYKKVF..............................PD-FYVLGWYSTGSDV----RDTDMQIH--------- |
| CSN6B_ARATH/6-136 | SSGLTFKLHPLVMLNISDHFTRVKTQlnppaascatgngsnnadamllqNPRVYGCVIGLQRGR-.......................-TVEIFNSFELIFDPALDT-----LDRSFLEKKQELYKKVF..............................PD-FYVLGWYSTGSDA----TESDMHIHKALMDINES |
| CSN6_HUMAN/36-148 | TGSVSVALHPLVILNISDHWIRMRSQe....................grPVQVIGALIGKQEGR-.......................-NIEVMNSFELLSHTVEEK---IIIDKEYYYTKEEQFKQVF..............................KE-LEFLGWYTTGGPP----DPSDIHVHKQVCEIIES |
| O43060_SCHPO/18-129 | SSPLNIVIEPAVLFSILDHSTRKSEN.......................NQRVIGTLLGTRSEDG.......................REIEIKSCFAVPHNESSEQ---VEVEMEYHRAMYHLHLKAN..............................PR-EVVVGWYATSPDL----DAFSALIQNLYASPAEP |
| IF35_HUMAN/87-196 | PGGRVVRLHPVILASIVDSYERRNEG.......................AARVIGTLLGTVDKH-.......................-SVEVTNCFSVPHNESEDE---VAVDMEFAKNMYELHKKVS..............................PN-ELILGWYATGHDI----TEHSVLIHEYYSREAPN |
| IF35_ARATH/23-133 | TSVLTARIHPLVIFNVCDCFVRRPDS.......................AERVIGTLLGSILPDG.......................-TVDIRNSYAVPHNESSDQ---VAVDIDYHHNMLASHLKVN..............................SK-ETIVGWYSTGAGV----NGGSSLIHDFYAREVPN |
| PSD7_ARATH/12-125 | RTIEKVVVHPLVLLSIVDHYNRVAKD......................sSKRVVGVLLGSSSRG-.......................-VVDVTNSYAVPFEEDDKDPSIWFLDHNYHESMFHMFKRIN..............................AK-EHVVGWYSTGPKL----RENDLDVHALFNGYVPN |
| O61792_CAEEL/36-151 | LPVNKVTVHPLVLLSVVDHFNRVSKT.....................qsVKRVVGVLLGSMKKDK.......................-TLDIGNSFAVPFDEDDKDKSTWFLDMDYLESMYGMFYKVA..............................AK-EKIVGWYHTGPKL----HKNDIAINEQLKRFCPN |
| PSD7_DROME/5-120 | VSVNKVIVHPLVLLSVVDHFNRMGKI.....................gnQKRVVGVLLGCWRSKG.......................-VLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVN..............................AR-ERVVGWYHTGPKL----HQNDIAINELVRRYCPN |
| O13386_TRIRE/11-125 | LVTRNVSVAPLVLLSAVDHYNRTVTS.....................ktKRRVVGVLLGQNDGK-.......................-NVRVSNSFAVPFEEDEKDPSVWFLDHNYVESMNDMFKKVN..............................AR-EKLVGWYHTGPKL----RASDLEINELFKRYTPN |
| RPN8_SCHPO/12-125 | IVPQQVIVHPLVLLSAVDSYNRSAKG......................tKRRVVGILLGQNNGD-.......................-VVNVANSYAIPFEEDEKNASVWFLDHNFMESMNEMFKKIN..............................AN-EKLVGWYHTGPQL----RPSDLEINNLLKKYIPN |
| RPN8_YEAST/2-115 | LQHEKVTIAPLVLLSALDHYERTQTK......................eNKRCVGVILGDANSS-.......................-TIRVTNSFALPFEEDEKNSDVWFLDHNYIENMNEMCKKIN..............................AK-EKLIGWYHSGPKL----RASDLKINELFKKYTQN |
| Q18967_CAEEL/2-117 | ASNLTVNVHPGVYMNVVDTHMRRTKSsa.................kntgQEKCMGTLMGYYEKG-.......................-SIQVTNCFAIPFNESNDDLEIDDQFNQ---QMISALKKTS..............................PN-EQPVGWFLTTSDI----TSSCLIYHDYYVRVITE |
| O58174_PYRHO/2-96 | ----RVKIRRELLEYLLELAKSFYPR.......................--EVAGFLRMKDGVF-.......................--EEVLIVPKGFFGESSVYFDLTLMPHD-------------..............................---ESIKGTFHSHPSPFPYPSEGDLMFFSKFGGIHII |
| O28085_ARCFU/2-93 | ------KISRGLLKTILEAAKSAHPD.......................--EFIALLSGSKDVMD.......................-----ELIFLPFVSGSVSAVIHLDMLPI-------------..............................--GMKVFGTVHSHPSPSCRPSEEDLSLFTRFGKYHII |
| O27052_METTH/17-118 | KPVRRVVVDSEVMDEVLEIARRSHPH.......................--EFAALLEGRQEGE-.......................-VLHVTGLIFLPSETSDEGAVMDVLMLP-------------..............................-PFTGAVGSVHSHPGPVNLPSAADLHFFSKNGLFHLI |
| Q12468_YEAST/81-205 | PSYTHVLISKLSCEKITHYAVRGGNI.......................--EIMGILMGFTLKD-.......................-NIVVMDCFNLPVVGTETRVNAQLESYEYMVQYIDEMYNHNdggd.....................grdykGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDP |
| CSN5_SCHPO/30-144 | EFFRSVKISAVALLKMLRHVSQGMPL.......................--EVMGYVQGKVEGA-.......................-SLIILDSFALPVEGTETRVNAHEEAQEYSVQYHTLCKSV-..............................YRHENVIGWYHSHPNYGCWLSGVDVETQRQNQKYQDP |
| CSN5_CAEEL/51-165 | HYFKQIKISAIALLKMTMHAKRGGNL.......................--EIMGLLQGRIDANS.......................-FI-ILDVFALPVEGTETRVNAQAQAYEYMTVYSEMCDTE-..............................GRKEKVVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEP |
| CSN5B_ARATH/54-168 | NYFKRVHISALALLKMVVHARSGGTI.......................--EIMGLMQGKTEGD-.......................-TIIVMDAFALPVEGTETRVNAQSDAYEYMVEYSQTSKLA-..............................GRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEP |
| O16155_SCHMA/21-128 | HDRVVVDVSLVVDTKVILQNQN----.......................----ITFDVGHAEDFG.......................-VIKVVDVFAMPQSGTGVSVEAVDPVFQ--AKMLDMLRQT-..............................GRPEMVVGWYHSHPGFGCWLSGVDMNTQQSFEALSDR |
| YPT5_CAEEL/24-137 | DTSETVNISSLALLKMLRHARSGIPL.......................--EVMGLMLGDFVDDY.......................-TINVTDVFAMPQSGTSVTVESVDPVYQ--TKHMDLLKLV-..............................GRTENVVGWYHSHPGFGCWLSSVDVNTQQSFEALHPR |
| O00850_DICDI/26-139 | DTAETIHISSLALLKMLQHARAGVPL.......................--EVMGLMLGELIDEY.......................-TIRVIDVFAMPQSGTSVSVEAIDPVFQ--TKMLDMLKQT-..............................GRDEIVIGWYHSHPGFGCWLSSVDVNTQQSFEQLQSR |
| RPN11_SCHPO/25-138 | DNSECVYISSLALLKMLRHGRHGTPM.......................--EVMGLMLGEFVDDF.......................-TVRVVDVFAMPQSGTGVSVEAVDPVFQ--KNMMDMLKQT-..............................GRPEMVVGWYHSHPGFGCWLSSVDINTQQSFEQLTPR |
| C61A_MOUSE/7-148 | QAVQAVHLESDAFLVCLNHALSTEKE.......................--EVMGLCIGELNDDIrsdskftytgtemrtvqekmdtiRIVHIHSVIILRRSDKRKDRVEISPEQL--SAASTEAERLAe...........................ltGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQG |
| C61A_HUMAN/7-148 | QAVQAVHLESDAFLVCLNHALSTEKE.......................--EVMGLCIGELNDDT.......................RSDSKFAYTGTEMRTVAEKVDAVRIVHI------HSVIILRrsdkrkdrveispeqlsaasteaerlaeltGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQG |
| O95630_HUMAN/252-361 | DGLRHVVVPGRLCPQFLQLASANTAR.......................GVETCGILCGKLMRNE.......................-FT-ITHVLIPKQSAGSDYCNTENE--------EELFLIQD..............................QQGLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPE |
| O15731_DICDI/262-371 | SKLRKIIVHGEVFQEFMRLAENNTKR.......................SIETCGILSGTLSND-.......................-VFRITTIIIPKQEGTTDTCNTIEEHEIFEYQL--------..............................ENDLLTLGWIHTHPTQDCFLSAVDVHTHCSYQYLLQE |
| O75965_HUMAN/2099-2205 | ETGYTYILPKNVLKKFICISDLRAQI.......................----AGYLYGVSPPDN......................pQVKEIRCIVMVPQWGTHQTVHLPGQLPQ-----HEYLKE--..............................---MEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPS |
| IF33_HUMAN/34-146 | SAVKQVQIDGLVVLKIIKHYQEEGQG.......................TEVVQGVLLGLVVED-.......................-RLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNID-..............................---HLHVGWYQSTYYG-SFVTRALLDSQFSYQHAIEE |
| O01974_CAEEL/10-139 | PSVKHILLDSLVVMKIVKHVDSELHAgi.................sevsGDACAGVLTGLVFLED.......................SRLEITNCFPTVRNEPVMDDDANAAQQYEEQKQHEMLDMLRkf.........................rtmNIDYEIVGFYQSHQFG-AGFSHDLVESMFDYQAMGPE |
| O67597_AQUAE/2-103 | -----LKVKKEVLEKMIKQAERDYPY.......................--ETCGLLIGKSEGG-.......................-IRIAYEAFETPNANPDRKHDRYEIAPKDYMRAEDYAISK-..............................--GMEIVGVYHSHPDH------PDRPSQFDLQRAFPD |
| P73582_SYNY3/2-121 | ---VQLSLSQVHQDQIYRHGERCYPE.......................--ECCGLLLGKILIGEn....................ghRHWQVVEVQPTENCWGDVEEFQQNNHQGNKLHYFAIDPKVLlsaq......................kdcrQKGLSIIGIFHSHPHG------QPIPSEFDRAIAWPE |
| Y1369_MYCBO/6-114 | GTVYVLVIRADLVNAMVAHARRDHPD.......................--EACGVLAGPEGSDR.......................-PERHIPMTNAERSPTFYRLDSGEQLKV---WR-AMEDAD-..............................---EVPVVIYHSHTATEAYPSRTDVKLATEPDAHYVL |
| O59157_PYRHO/26-138 | YPQQTNMILVLPKNIIEEIITRSRES.......................KIEICGFIFGTKNGER.......................-FIGKEVEFIRNRLNSSVEFEMDPEEMINALERAERKG---..............................---LEVVTIFHSHLNCPPYPSKKDIKGMENWRIPWLI |