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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01398 phylogeny
for nucleotide alignment


 
(((((((O59157_PYRHO/26-138,(O27052_METTH/17-118,(O58174_PYRHO/2-96,(O28085_ARCFU/2-93,Y1369_MYCBO/6-114)))),(O67597_AQUAE/2-103,P73582_SYNY3/2-121)),(O01974_CAEEL/10-139,IF33_HUMAN/34-146)),(O75965_HUMAN/2099-2205,(O15731_DICDI/262-371,O95630_HUMAN/252-361))),(((PSD7_ARATH/12-125,((O13386_TRIRE/11-125,(RPN8_SCHPO/12-125,RPN8_YEAST/2-115)),(PSD7_DROME/5-120,O61792_CAEEL/36-151))),(CSN6_HUMAN/36-148,(CSN6B_ARATH/6-136,O82466_ORYSA/51-165))),(Q18967_CAEEL/2-117,((IF35_ARATH/23-133,O43060_SCHPO/18-129),IF35_HUMAN/87-196)))),((((RPN11_SCHPO/25-138,O16155_SCHMA/21-128),O00850_DICDI/26-139),YPT5_CAEEL/24-137),(((CSN5B_ARATH/54-168,CSN5_CAEEL/51-165),Q12468_YEAST/81-205),CSN5_SCHPO/30-144))),C61A_HUMAN/7-148,C61A_MOUSE/7-148);
(((((((O59157_PYRHO/26-138:0.92749,(O27052_METTH/17-118:0.60888,(O58174_PYRHO/2-96:0.53660,(O28085_ARCFU/2-93:0.44328,Y1369_MYCBO/6-114:0.77811):0.12417):0.04071):0.12972):0.33550,(O67597_AQUAE/2-103:0.45381,P73582_SYNY3/2-121:0.72884):0.09842):0.14926,(O01974_CAEEL/10-139:0.36011,IF33_HUMAN/34-146:0.53763):0.30398):0.00000,(O75965_HUMAN/2099-2205:0.84292,(O15731_DICDI/262-371:0.32359,O95630_HUMAN/252-361:0.46803):0.26662):0.14606):6.95732,(((PSD7_ARATH/12-125:0.20536,((O13386_TRIRE/11-125:0.17882,(RPN8_SCHPO/12-125:0.20153,RPN8_YEAST/2-115:0.33787):0.15687):0.11906,(PSD7_DROME/5-120:0.15667,O61792_CAEEL/36-151:0.28937):0.14569):0.06953):0.19276,(CSN6_HUMAN/36-148:0.41117,(CSN6B_ARATH/6-136:0.30935,O82466_ORYSA/51-165:0.39130):0.13455):0.31636):0.16882,(Q18967_CAEEL/2-117:0.55457,((IF35_ARATH/23-133:0.32848,O43060_SCHPO/18-129:0.53138):0.13165,IF35_HUMAN/87-196:0.25283):0.11141):0.04615):39.50470):8.43307,((((RPN11_SCHPO/25-138:0.10708,O16155_SCHMA/21-128:0.42073):0.07485,O00850_DICDI/26-139:0.15801):0.08275,YPT5_CAEEL/24-137:0.26339):0.02244,(((CSN5B_ARATH/54-168:0.21338,CSN5_CAEEL/51-165:0.23269):0.08199,Q12468_YEAST/81-205:0.51636):0.06881,CSN5_SCHPO/30-144:0.30690):0.29778):0.54235):0.19345,C61A_HUMAN/7-148:0.26088,C61A_MOUSE/7-148:0.11943);