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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01396 phylogeny
for amino acid alignment


 
((((((((((TOP1_BACAN/602-634,(Q60149_STRPY/630-664,Q43888_STRAG/238-272)),(TOP1_METTH/595-635,(TOP1_ARCFU/580-619,TOP1_METJA/597-635))),(TP3A_HUMAN/655-694,TOP1_METTH/677-715)),TOP1_METJA/718-756),((((TOP1_MYCGE/615-655,TOP1_MYCPN/621-661),Y664_METJA/263-301),(TOP1_MYCGE/664-705,TOP1_MYCPN/670-711)),((YRDD_ECOLI/61-99,(YRDD_HAEIN/12-50,YRDD_HAEIN/59-97)),TOP1_METJA/677-715))),((TOP1_BACSU/616-656,TOP1_HELPY/660-698),(YRDD_ECOLI/103-143,YRDD_HAEIN/101-141))),TOP1_HELPY/569-607),TOP1_HELPY/613-651),TOP1_BACSU/576-614),TOP1_ECOLI/708-745,TOP1_HAEIN/713-748);
((((((((((TOP1_BACAN/602-634:0.56534,(Q60149_STRPY/630-664:0.00000,Q43888_STRAG/238-272:0.00000):0.26930):0.15896,(TOP1_METTH/595-635:0.66077,(TOP1_ARCFU/580-619:0.43537,TOP1_METJA/597-635:0.28546):0.19186):0.16661):0.17611,(TP3A_HUMAN/655-694:0.95817,TOP1_METTH/677-715:0.45784):0.17853):0.15374,TOP1_METJA/718-756:0.23260):0.26398,((((TOP1_MYCGE/615-655:0.11814,TOP1_MYCPN/621-661:0.20114):0.42330,Y664_METJA/263-301:0.66917):0.16359,(TOP1_MYCGE/664-705:0.12397,TOP1_MYCPN/670-711:0.07689):0.53532):0.21016,((YRDD_ECOLI/61-99:0.32189,(YRDD_HAEIN/12-50:0.56892,YRDD_HAEIN/59-97:0.38375):0.23640):0.13230,TOP1_METJA/677-715:0.29063):0.08993):0.14661):0.20646,((TOP1_BACSU/616-656:0.42190,TOP1_HELPY/660-698:0.27191):0.27647,(YRDD_ECOLI/103-143:0.16479,YRDD_HAEIN/101-141:0.51600):0.22001):0.51843):0.09216,TOP1_HELPY/569-607:0.35546):0.21655,TOP1_HELPY/613-651:0.19685):0.27314,TOP1_BACSU/576-614:0.31656):0.46179,TOP1_ECOLI/708-745:0.00000,TOP1_HAEIN/713-748:0.24256);