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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01394 phylogeny
for nucleotide alignment


 
(((((((CLH_SCHPO/19-56,(Q9CA00_ARATH/20-56,(CLH_DICDI/18-56,(CLH_YEAST/18-55,Q95Z06_9TRYP/19-57)))),CLH_CAEEL/17-54),(CLH_DROME/19-56,(CLH_RAT/19-56,Q7SHV2_NEUCR/19-58))),((Q8X1X8_PARBR/63-99,Q95Z06_9TRYP/254-290),(Q9C6U0_ARATH/76-111,(((CLH_CAEEL/251-286,CLH_DICDI/251-287),((Q7SHV2_NEUCR/257-292,Q7PQY9_ANOGA/253-288),CLH_RAT/253-288)),CLH_SCHPO/251-286)))),((((Q8X1X8_PARBR/107-141,Q95Z06_9TRYP/298-332),((CLH_SCHPO/102-133,((Q7SHV2_NEUCR/105-136,(((CLH_RAT/102-133,CLH2_HUMAN/102-133),CLH_DROME/102-133),(CLH_CAEEL/100-131,(CLH_DICDI/102-133,Q9CA00_ARATH/108-139)))),(Q8I5L6_PLAF7/107-138,Q95Z06_9TRYP/103-134))),(Q8I5L6_PLAF7/183-224,((CLH_YEAST/151-190,(CLH_DICDI/148-187,(((Q9CA00_ARATH/154-197,Q39834_SOYBN/154-197),(Q7SHV2_NEUCR/153-192,(CLH_RAT/148-187,CLH_DROME/148-187))),CLH_CAEEL/146-185))),CLH_SCHPO/147-186)))),Q7SHV2_NEUCR/300-334),(((CLH_YEAST/302-336,((Q8UUQ9_CHICK/31-65,CLH2_HUMAN/296-330),(Q9C6U0_ARATH/119-153,(Q7RNG3_PLAYO/314-348,CLH_DICDI/295-329)))),(CLH_CAEEL/294-328,CLH_SCHPO/294-328)),CLH_DROME/296-330))),(((CLH_SCHPO/197-233,Q7SHV2_NEUCR/203-239),(CLH_DROME/198-234,(Q7PQY9_ANOGA/198-234,(((CLH_RAT/198-234,CLH2_HUMAN/198-234),(CLH_CAEEL/196-232,(Q9C6U0_ARATH/18-58,Q39834_SOYBN/208-247))),CLH_DICDI/198-234)))),((CLH_YEAST/59-94,(Q7SHV2_NEUCR/62-97,(((((CLH_DICDI/60-94,Q8I5L6_PLAF7/59-99),Q9CA00_ARATH/60-100),CLH_RAT/60-94),CLH_CAEEL/58-92),CLH_SCHPO/60-94))),Q95Z06_9TRYP/61-95))),Q8X1X8_PARBR/12-43,Q95Z06_9TRYP/203-234);
(((((((CLH_SCHPO/19-56:0.30149,(Q9CA00_ARATH/20-56:0.26004,(CLH_DICDI/18-56:0.26073,(CLH_YEAST/18-55:0.41240,Q95Z06_9TRYP/19-57:0.35754):0.11384):0.06192):0.07343):0.06538,CLH_CAEEL/17-54:0.27957):0.10605,(CLH_DROME/19-56:0.21834,(CLH_RAT/19-56:0.21973,Q7SHV2_NEUCR/19-58:0.44057):0.04845):0.16895):0.57601,((Q8X1X8_PARBR/63-99:0.29453,Q95Z06_9TRYP/254-290:0.19208):0.37262,(Q9C6U0_ARATH/76-111:0.07693,(((CLH_CAEEL/251-286:0.31676,CLH_DICDI/251-287:0.20152):0.09505,((Q7SHV2_NEUCR/257-292:0.12488,Q7PQY9_ANOGA/253-288:0.17176):0.15351,CLH_RAT/253-288:0.14643):0.07516):0.12352,CLH_SCHPO/251-286:0.28968):0.19799):0.34940):0.30051):0.15069,((((Q8X1X8_PARBR/107-141:0.23503,Q95Z06_9TRYP/298-332:0.17357):0.20475,((CLH_SCHPO/102-133:0.14885,((Q7SHV2_NEUCR/105-136:0.30908,(((CLH_RAT/102-133:0.13005,CLH2_HUMAN/102-133:0.21236):0.12328,CLH_DROME/102-133:0.12678):0.06700,(CLH_CAEEL/100-131:0.23106,(CLH_DICDI/102-133:0.36121,Q9CA00_ARATH/108-139:0.14974):0.15658):0.14598):0.09691):0.11742,(Q8I5L6_PLAF7/107-138:0.35593,Q95Z06_9TRYP/103-134:0.27749):0.16097):0.09224):0.32339,(Q8I5L6_PLAF7/183-224:0.16391,((CLH_YEAST/151-190:0.36262,(CLH_DICDI/148-187:0.29895,(((Q9CA00_ARATH/154-197:0.10021,Q39834_SOYBN/154-197:0.19084):0.32510,(Q7SHV2_NEUCR/153-192:0.29422,(CLH_RAT/148-187:0.13755,CLH_DROME/148-187:0.26182):0.10702):0.13765):0.07372,CLH_CAEEL/146-185:0.23631):0.11203):0.10229):0.14466,CLH_SCHPO/147-186:0.33986):0.26914):0.80442):0.58530):0.35870,Q7SHV2_NEUCR/300-334:0.25595):0.06002,(((CLH_YEAST/302-336:0.57936,((Q8UUQ9_CHICK/31-65:0.23316,CLH2_HUMAN/296-330:0.09461):0.14196,(Q9C6U0_ARATH/119-153:0.56580,(Q7RNG3_PLAYO/314-348:0.61431,CLH_DICDI/295-329:0.14089):0.09693):0.07540):0.05449):0.06520,(CLH_CAEEL/294-328:0.20275,CLH_SCHPO/294-328:0.31480):0.06716):0.12572,CLH_DROME/296-330:0.12825):0.02801):0.55368):0.03783,(((CLH_SCHPO/197-233:0.61069,Q7SHV2_NEUCR/203-239:0.05593):0.14700,(CLH_DROME/198-234:0.07627,(Q7PQY9_ANOGA/198-234:0.14631,(((CLH_RAT/198-234:0.19485,CLH2_HUMAN/198-234:0.20373):0.06667,(CLH_CAEEL/196-232:0.22465,(Q9C6U0_ARATH/18-58:0.24525,Q39834_SOYBN/208-247:0.06497):0.27125):0.16663):0.04414,CLH_DICDI/198-234:0.68689):0.10670):0.16379):0.25630):0.09193,((CLH_YEAST/59-94:0.46755,(Q7SHV2_NEUCR/62-97:0.34202,(((((CLH_DICDI/60-94:0.18363,Q8I5L6_PLAF7/59-99:0.29754):0.39531,Q9CA00_ARATH/60-100:0.19034):0.09321,CLH_RAT/60-94:0.12879):0.08115,CLH_CAEEL/58-92:0.22596):0.12919,CLH_SCHPO/60-94:0.21799):0.09001):0.13937):0.23193,Q95Z06_9TRYP/61-95:0.18628):0.62985):0.18819):1.50085,Q8X1X8_PARBR/12-43:0.19334,Q95Z06_9TRYP/203-234:0.17958);