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Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF01390 - SEA)
SEA domain
(
Pfam
reference: accession no.
PF01390
)
(
Interpro
reference: accession no.
IPR000082
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
21 sequences @ 136 aa
(ave. pairwise identity: 0.19)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 19.89)
nucleotides
(available for above)
20 sequences @ 408 bp
(ave. pairwise identity: 0.37)
New Hampshire format
(total tree length: 64.46)
amino acids, restricted set
(corresp. to available nt seqs)
20 sequences @ 136 aa
(ave. pairwise identity: 0.20)
New Hampshire format
(total tree length: 17.64)