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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01388 alignment
(12 sequences with 118 aa)


JMJ_MOUSE/616-726 GRRWGPNVQRLACIKKHLRSQGIT.MDELPLIGG.CELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQ-----DRLAKLQEAYCQYLLSYDSLSPEEHRRLEKEVLMEKE
YP83_CAEEL/21-131 PEKQRKMAEFYNSLRMFYKRRWNA.TLKLPHVQG.VEVNLYRLYDTVMALGGWQKVAASDKWSDIAEMFGCKDDIL-----CGDHAIKIIYMRYLSKFEQVETIGDVDDYVDNEMSRS
P91019_CAEEL/296-407 MKVMAERRGFFERLIEFCEHNGEP.LTMVPQVSK.QSIDLHRLYIGVRAKGGFQQVTKDKYWKNLCTEANPDLAES----SAAGYQLRKHYQRHLLMLECRETGRNPEDEVAFADKMK
ARI3A_MOUSE/240-350 LDADPKRKEFLDDLFSFMQKRGTP.VNRIPIMAK.QVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSIT-----SAAFTLRTQYMKYLYPYECERRGLSSPNELQAAIDSN
DRI_DROME/290-400 INDDPKRKEFLDDLFSFMQKRGTP.INRLPIMAK.SVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSIT-----SAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGN
SMAF1_HUMAN/631-740 LGGEPERKMWVDRYLAFTEEKAMG.MTNLPAVGR.KPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTS------SSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADS
RBBP1_HUMAN/306-416 ELDPEERDNFLQQLYKFMEDRGTP.INKPPVLGY.KDLNLFKLFRLVYHQGGCDNIDSGAVWKQIYMDLGIPILNS-----AASYNLKTAYRKYLYGFEEYCRSANIQFRTVHHHEPK
Q23541_CAEEL/118-233 EAIVKEKHTFIDRLINFNRYSGL-.TFEFPVDRDgNIVDLYRLHRIVQNFGGCEEVNEDEKWRDVAREYLPKEQMARGVPSAFINLIRSHYNLHIEPFNRNLKEKAMKNDDESDDEME
YM42_YEAST/182-294 EFQRTKIVDFYAKLYNFHNKIKKStLTRIPSIDK.RTLDLYRLRSCVKLRGGFNAVCEKKLWAQIGRELGYSGRIM----SSLSTSLRSAYAKILLDFDIYEEEEQAARNNEKNEDMV
RBBP2_HUMAN/81-189 EAMTRVRLDFLDQLAKFWELQGS-.TLKIPVVER.KILDLYALSKIVASKGGFEMVTKEKKWSKVGSRLGYLPGK------GTGSLLKSHYERILYPYELFQSGVSLMGVQMPNLDLK
JD1C_HUMAN/76-184 EAQTRVKLNYLDQIAKFWEIQGS-.SLKIPNVER.RILDLYSLSKIVVEEGGYEAICKDRRWARVAQRLNYPPGK------NIGSLLRSHYERIVYPYEMYQSGANLVQCNTRPFDNE
SWI1_YEAST/403-508 ELNNKQYELFMKSLIENCKKRNMP.LQSIPEIGN.RKINLFYLYMLVQKFGGADQVTRTQQWSMVAQRLQISDY----------QQLESIYFRILLPYERHMISQEGIKETQAKRIFL