PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam
 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF01335 alignment |
| Q8UVG5_BRARE/102-185 | TACAGGGTTCTAATGGCAGAT...GTGAGTGAAAACTTGGATAAGGAGGATTTACAATCTCTTATCTTCCTCCTAAGC.........AGTATCCTGCCCAAAGAAAGA......TCAACTAGAGCTACTAGCTTTCTAGATGTGGTGGTGGAG...TTGGAGAAATTAAATGAAGTATCTTGTGAGAAGCTG............GACTTTCTTGAAAAGTGTCTTAAAAATATTCGCAGAAATGACCTTGTCAAAAAAATTCAGGCGTACAGGAATAGAGGTCAG |
| CFLAR_MOUSE/98-184 | TATAGGGTCCTGCTGATGGAG...ATTGGTGAGAGCTTAGATCAGAACGATGTATCCTCCTTAGTTTTCCTTACAAGGattacaaggGATTACACAGGCAGAGGCAAG......ATAGCCAAGGACAAGAGTTTCTTGGATCTGGTGATTGAA...TTGGAGAAACTGAATCTAATTGCTTCAGACCAATTG............AATTTGTTAGAAAAATGCCTGAAGAACATCCACAGAATAGACTTGAACACAAAGATCCAGAAGTACACCCAGTCCAGCCAA |
| CFLAR_HUMAN/93-176 | TATAGAGTGCTGATGGCAGAG...ATTGGTGAGGATTTGGATAAATCTGATGTGTCCTCATTAATTTTCCTCATGAAG.........GATTACATGGGCCGAGGCAAG......ATAAGCAAGGAGAAGAGTTTCTTGGACCTTGTGGTTGAG...TTGGAGAAACTAAATCTGGTTGCCCCAGATCAACTG............GATTTATTAGAAAAATGCCTAAAGAACATCCACAGAATAGACCTGAAGACAAAAATCCAGAAGTACAAGCAGTCTGTTCAA |
| Q99CX0_BHV4/95-177 | TATAAACAACTGATTTTCTCC...ATCGGACAAAACATAGATGATGAAGATTTAATTTCTATAAAATTTATCTCAATG.........AACTATATTGGAAAATCCCCC......---TCAAAGATTAAAAATTATTTAGACTGGGTCAGGGCC...TTGGAAAAAGTTGCCATGGTAGGACCAGACAACCTA............GATCTCTTTGAAACATTATTCAAGCAAATACATAGAATGGACATTGTCAAAATGATCAAGAACTACAGAACCAGAGAAACA |
| CFLA_EHV2/93-170 | TTCAGGTGCCTGATGGCCCTG...GTCAATGACTTCCTCTCGGACAAGGAGGTGGAGGAGATGTACTTTCTGTGCGCCccgcgcctgGAGAGTCACTTAGAGCCGGGC......TCCAAAAAG------TCTTTCCTCAGACTGGCCAGTCTG...CTGGAAGACCTGGAGCTGCTGGGGGGCGATAAGCTA............ACATTTTTAAGGCACCTCTTGACCACCATCGGACGGGCCGACCTGGTAAAA---------------------AATCTACAG |
| Q9JHX4_RAT/101-183 | TACAGGGTTATGCTCTTTAAG...CTCTCAGAAGACATGGACAAGGAGGATTTGAAATCTTTTAAGTTCCTTTTGATC.........ACTGAGATCCCTAAATGTAAA......CTGCAAGACAACTCGAGCCTGCTTGATATTTTCGTAGAG...ATGGAGAAGAGGACTATCCTGGCAGAAAACAACTTG............GTTACCCTAAAATCAATCTGTTTCCGGGTCAAC---AGGAGCTTGCTGGGAAGGATCGACGATTACGAACGATCAAGCACA |
| CASP8_MOUSE/101-183 | TACAGGGTCATGCTCTTTAAG...CTCTCAGAAGAAGTGAGCGAGTTGGAATTGAGATCTTTTAAGTTCCTTTTGAAC.........AATGAGATCCCCAAATGTAAG......CTGGAAGATGACTTGAGCCTGCTTGAAATTTTTGTAGAA...ATGGAGAAGAGGACCATGCTGGCAGAAAATAACTTG............GAAACCCTAAAATCAATCTGTGACCAGGTCAAC---AAGAGCCTGCTGGGGAAGATCGAGGATTATGAAAGATCAAGCACA |
| CASP8_HUMAN/101-183 | TACAGGGTCATGCTCTATCAG...ATTTCAGAAGAAGTGAGCAGATCAGAATTGAGGTCTTTTAAGTTTCTTTTGCAA.........GAGGAAATCTCCAAATGCAAA......CTGGATGATGACATGAACCTGCTGGATATTTTCATAGAG...ATGGAGAAGAGGGTCATCCTGGGAGAAGGAAAGTTG............GACATCCTGAAAAGAGTCTGTGCCCAAATCAAC---AAGAGCCTGCTGAAGATAATCAACGACTATGAAGAATTCAGCAAA |
| Q90WU1_CHICK/101-183 | TTCAGGTATCTGCTCTTTCAG...CTGTCAGAAAACATCACCAAAGATGACATGAAGTGTTTCAAGTTTCTTCTGGGG.........AAAGAATTACCAAAATGCAAG......CTAAGTCCTGAAACTACAATGCCGGACGTTTTCATTGAG...ATGGAGAAGAAGGGGATTTTGAAAGAAGACAACTTA............ACTGTCCTGAAGACTATTTGTGGGAAAGTGGAC---AAGAGCCTGTTGAAGAAAATTGAAGACTATGAATTAAACTTACTT |
| Q9I8J3_BRARE/99-179 | TATAGAAAGATGCTATTGAAA...ATATCTGAGGACATGACAGAAGAAAACTTTCGCGCAGCAAAGTTTCTTTTGGAT.........------CTTCCAAGGGCAAAG......CTGGGAAGATCTACTTCATTTCTAGATGCTTTGATTGAG...ATGGAAAAACAACAGAGGCTTGGGCCAGACAATCTG............GATGAACTTTACAGAATTTTAGAAAAATGTGAC---AAACAGCTGGCTGTTATGATCGAGAGGTTCAGGAATCAGAGTCAC |
| Q9IB64_XENLA/113-193 | TACAGGATTTTACTTTATGAC...ATTTCACAAGGTCTTTCTAAAAAAGAAGTCGAAGATTTGAAATACTTGCTGGAT.........---------CTGAGCACAGCC......AAAACAGAAAACGCTTCTATACTGGAAATATTCTTGGAA...CTGGAAAAAGTTGGAAAATTACATCCCGATGATCTA............CAGAAGCTAAAACACGATTTAGAAACAATTGGTTGTAAAAACCTTTCTAGGAACATTGAAGACTATGAAAGAATATCAGAA |
| Q9IB62_XENLA/98-177 | TATAGGCAAATGCTTTATGAA...CTTTCAGAAAATGTAACTGGAGAAGATGAAAAGCGCATACTGTTCATACTGCCT.........---------CTTCATAAAAAG......CATAAAGAGAACAAGACCTTTCTGGATGTGTTGTGTCAA...CTGGAAAAAGAGAACGCCATTACAGAAGATAATGTG............AAACTCCTGGAAGAAGTCTTCAGAAAGGTTTCA---CCTGATCTATTGAAAATAATTGAAAAATACAAGGAACGAGGAGAT |
| CASPA_HUMAN/115-193 | TTTAGAAACCTGCTCTACGAA...CTGTCAGAAGGCATTGACTCAGAGAACTTAAAGGACATGATCTTCCTTCTGAAA.........GACTCGCTTCCCAAAACTGAA......ATGACCTCC------------CTAAGTTTCCTGGCATTT...CTAGAGAAACAAGGTAAAATAGATGAAGATAATCTG............ACATGCCTGGAGGACCTCTGCAAAACAGTTGTA---CCTAAACTTTTGAGAAACATAGAGAAATACAAAAGAGAGAAAGCT |
| PE15_HUMAN/4-87 | TACGGGACCCTCCTGCAAGAC...CTGACCAACAACATCACCCTTGAAGATCTAGAACAGCTCAAGTCGGCCTGCAAG.........GAAGACATCCCCAGCGAAAAG......AGTGAGGAGATCACTACTGGCAGTGCCTGGTTTAGCTTC...CTGGAGAGCCACAACAAGCTGGACAAAGACAACCTC............TCCTACATTGAGCACATCTTTGAGATCTCCCGCCGTCCTGACCTACTCACTATGGTGGTTGACTACAGAACCCGTGTGCTG |
| Q8UVG5_BRARE/5-89 | TTTTCTACTCTGGTTAACAAA...GTGACCGCATCTCTTAGCAGCGACGAGTCTAAGATCTTGCTGTATCTTTGCACT.........GATTTGTTCAACAACAGTTGT......GTGGAAGAA------CTGAGAGGAGATTTGCTGGCCTTT...GCCCAACAGAACCCCAATCAAGCA---GGTCAACCTcattctggaaatGCTCTGCTGATGGAGCTCATGTTTCAAATGAAGCGCTATGATTTACTACGCAAAGTTTTTGGCACCAACAAACAACAGGTA |
| VG71_SHV21/3-81 | TTAAAAACAACTGTGTTACAC...ATAACAGACTCATTTACAGATGAAGAAATGTACTGTCTATTATTTTTAATTAAT.........GGGTGTATTCCAAGAAGCTGT......AATGCAGTT------AACATCTCAGATTTAATTATAGAAactTTATCAAAAAGTACACAATGGGAT---------ATT............---TGTCTAATGCAGTGTTTATATGTGCTTAGAAAAATAGGACTATTACTGAACCTCTTCCAAGTAACAAAAGAAGCTGTA |
| Q9JHX4_RAT/3-86 | TTCCACAGTTGTCTTTACGAT...ATTGCTGAACGTCTGGGCAACGAAGAACTGGCTGCCCTCAAGTTCCTGTGCTTG.........GACCACATCCCGCAGAAGAAG......CAGGAGTCCATCAATGATGTCCTGGTGCTATTTCAGAGG...CTGCAGGAAGAGGGGATGTTGGAGGAAGACAATTTG............TCCTTCCTGAAGGAGCTGCTTTTCCATATCAGTCGGCGGGATCTGCTGAGCAGAGTCCTAAAAAGCAGCCCAGAGGAAATG |
| CASP8_MOUSE/3-86 | TTCCAGAGTTGTCTTTATGCT...ATTGCTGAAGAACTGGGCAGTGAAGACCTGGCTGCCCTCAAGTTCCTGTGCTTG.........GACTACATCCCACACAAGAAG......CAGGAGACCATCGAGGATGCCCAGAAGCTATTTCTGAGG...CTGCGGGAAAAGGGGATGTTGGAGGAAGGCAATCTG............TCTTTCCTGAAAGAGCTGCTTTTCCACATCAGTCGGTGGGACCTGCTGGTCAACTTCCTAGACTGCAACCGAGAGGAGATG |
| CASP8_HUMAN/3-86 | TTCAGCAGAAATCTTTATGAT...ATTGGGGAACAACTGGACAGTGAAGATCTGGCCTCCCTCAAGTTCCTGAGCCTG.........GACTACATTCCGCAAAGGAAG......CAAGAACCCATCAAGGATGCCTTGATGTTATTCCAGAGA...CTCCAGGAAAAGAGAATGTTGGAGGAAAGCAATCTG............TCCTTCCTGAAGGAGCTGCTCTTCCGAATTAATAGACTGGATTTGCTGATTACCTACCTAAACACTAGAAAGGAGGAGATG |
| Q90WU1_CHICK/3-86 | TTCTCGCAGCTGCTCTTCGTG...ATCAGCGAGGCGCTGGACAGGACTGAGCTGGCGTCTCTGAAGTTTCTCAGCCTG.........GAGCACGTCACTGTAAGGAAG......CGGGAAGATATTGAGGAGCCCAAGGCCTTCTTCCAAGCA...TTACAGGAGAAAGGGATGATCGAGGTGGGGGACCTG............TTCTTCTTGAAGGAGCTGCTCTATCGGATCAATCGAATAGACCTTCTAGCTTCCTACCTGGGCTCCAGCCGAGAGGAGATG |
| Q9I8J3_BRARE/4-82 | ------CAGATCTTTCACGAG...ATTGATGAGAACCTGACAAGCGGTGATGTGGACCAGCTGAAGTTTCTGTGCTTA.........GATTTCATTCCCAAAAGGCGT......TTGGAGTCAGTGACTGATGCTAAAGACCTGATTCTGCGA...CTGGATGAGCAAGGATTGCTTGAG---GATGAGCTG............---CTCTTCCCTGAACTTCTGATCGCAATTGGCCGCATTGACTTGCTCGAG---ATTCTGAAAAAATCTAAAGAGGAAGTG |
| Q9IB64_XENLA/17-100 | ATGAATAAACTGCTGTTTGAA...ATAAGTGAGGATCTGGACAAAACAGAAACCCTTGCAATGATTTTCCTTTGTGAG.........AAGCGCGTTACTGCCCAAGAA......AAAGAAAACATCAAAGATGCAAAGACATTGTTCCTGTGT...CTCAAAAAGAAAGATTTAATATGTTATAACGATCTG............TCCTTCTTGAAAGAGTTACTCTACAGAATTGGTAGAAACGACCTACTCAGAGGCAAATTAGGGGTTAGAACAGAAGAAATT |
| Q9IB62_XENLA/3-86 | TTCAATTCCATGCTTCTCCGT...ATTGATGATGGATTAGGAAGAGAAGATATAGAGGCTTTAAAATTCCTCTGCAGG.........GATGTCCTAAGGAAAAATAAA......TTGTTATCTGTTCAGTCTGGCCATGAACTTTTTCAGCAA...CTCATGACTGAAGATTTAATAAATGAGGATAATTAT............TTTCTGTTGGGGGAACTTTTATACATTATTAATCACCACAGCCTTCTCCATGATCTTGGCACAAATAAAGTGGAAGTGCAG |
| CASPA_HUMAN/20-102 | TTTCGTGAGAAGCTTCTGATT...ATTGATTCAAACCTGGGGGTCCAAGATGTGGAGAACCTCAAGTTTCTCTGCATA.........GGATTGGTCCCCAACAAGAAG......CTGGAGAAGTCCAGCTCAGCCTCAGATGTTTTTGAACAT...CTCTTGGCAGAGGATCTGCTGAGTGAGGAAGACCCT............TTCTTCCTGGCAGAACTCCTCTATATCATACGGCAGAAGAAGCTGCTGCAG---CACCTCAACTGTACCAAAGAGGAAGTG |
| Q8CD57_MOUSE/4-87 | TTCCTGGTGCTGCTGCACTCG...CTGTCCGGCAGCCTGTCGGGCAACGATCTGATGGAGCTCAAGTTCTTGTGCCGC.........GAGCGCGTGAGCAAACGAAAG......CTGGAGCGCGTGCAGAGTGGCCTGGACCTGTTCACGGTG...CTGCTGGAGCAGAACGACCTGGAGCGCGGGCACACC............GGGCTGCTGCGCGAGTTGCTGGCCTCGCTGAGCCGACACGATCTACTGCAGCGCCTGGACGACTTCGAGGCGGGGACGGCG |
| FADD_HUMAN/4-87 | TTCCTGGTGCTGCTGCACTCG...GTGTCGTCCAGCCTGTCGAGCAGCGAGCTGACCGAGCTCAAGTTCCTATGCCTC.........GGGCGCGTGGGCAAGCGCAAG......CTGGAGCGCGTGCAGAGCGGCCTAGACCTCTTCTCCATG...CTGCTGGAGCAGAACGACCTGGAGCCCGGGCACACC............GAGCTCCTGCGCGAGCTGCTCGCCTCCCTGCGGCGCCACGACCTGCTGCGGCGCGTCGACGACTTCGAGGCGGGGGCGGCG |
| CFLA_EHV2/2-75 | AGTCACTACAGTATGATTGAC...ACTTACTTCTCCCTGGACGAGGATGAGACCGAGACCTATCTGTACCTCTGCAGG.........GAC---CTCCTGAAAAATAAG......---GGAGAGTTCCAGTGCACCAGGGACGCCTTTAAATTT...CTGTCAGACTATGCGTGCCTCTCG---------GCC............GCCAACCAGATGGAGCTATTGTTTAGGGTGGGGAGGCTGGACTTGATAAGG---------------AGAATCTTTGGCCAG |
| CFLAR_MOUSE/7-84 | TCTGCCGAGGTCATTCACCAG...GTGGAAGAGTGTCTTGATGAAGACGAGAAGGAGATGATGCTCTTCCTGTGTAGA.........GAT---GTGACTGAGAACCTG......GCTGCACCT------AACGTCAGGGACCTCCTGGATAGC...TTAAGTGAGAGAGGCCAGCTCTCT---------TTT............GCTACCTTGGCTGAATTGCTCTACAGAGTGAGGCGGTTTGACCTTCTCAAGAGGATCTTGAAGACAGACAAAGCAACCGTG |
| CFLAR_HUMAN/2-79 | TCTGCTGAAGTCATCCATCAG...GTTGAAGAAGCACTTGATACAGATGAGAAGGAGATGCTGCTCTTTTTGTGCCGG.........GAT---GTTGCTATAGATGTG......GTTCCACCT------AATGTCAGGGACCTTCTGGATATT...TTACGGGAAAGAGGTAAGCTGTCT---------GTC............GGGGACTTGGCTGAACTGCTCTACAGAGTGAGGCGATTTGACCTGCTCAAACGTATCTTGAAGATGGACAGAAAAGCTGTG |
| CFLA_MCV1/9-84 | AGCCTTCCATTTTTGCGACAC...TTGCTCGAAGAGTTGGACAGCCATGAGGACAGCTTGCTGCTGTTTCTGTGTCAC.........GACGCGGCCCCGGGCTGCACG......ACGGTCACG---------------CAAGCTTTGTGCTCG...CTTAGCCAACAGCGCAAGCTGACC---------CTC............GCGGCTCTGGTCGAGATGCTCTACGTGCTGCAGCGTATGGATCTTCTCAAGAGCCGCTTCGGGCTCAGCAAGGAGGGGGCC |
| O11300_MCV1/10-82 | TTCCTGCGGAATCTGCTGGCA...---------GAGCTGGACGCTAGCGAGCACGAGGTCTTACGGTTCCTGTGCCGC.........GATGTGGCGCCTGCTAGCAAG......ACTGCAGAA---------------GACGCTTTGCGAGCG...TTGCAGAGACGGCGTCTGCTGACA---------CTC............TCGAGCATGGCAGAACTGCTCTGTGCGCTCCGGCGCTTTGACGTTCTCAAGGTCCGCTTTGGTATGACGCGCGAGTGCGCG |
| P88961_HHV8/5-80 | ------GAGGTTCTCTGTGAG...GTGGCGCGGAAACTGGGCACGGATGACAGGGAAGTGGTATTGTTCCTCCTAAAC.........GTGTTCATACCTCAACCCACA......CTGGCCCAA---------TTAATTGGAGCTCTTAGAGCT...TTAAAGGAGGAGGGCAGGTTAACG---------TTT............CCCCTGTTAGCGGAATGTCTGTTTCGTGCAGGTCGCAGAGACCTCTTGCGCGACCTGCTTCACTTAGACCCGCGTTTTTTA |
| DEDD_HUMAN/25-109 | AGCCTGCACCGCATGTTTGACatcGTGGGCACTCATCTGACACACAGAGATGTGCGCGTGCTTTCTTTCCTCTTTGTT.........GATGTCATTGATGACCACGAG......CGTGGACTCATCCGAAATGGACGTGACTTCTTATTGGCA...CTGGAGCGCCAGGGCCGCTGTGATGAAAGTAACTTT............CGCCAGGTGCTGCAGCTGCTGCGCATCATCACTCGCCACGACCTGCTGCCCTACGTCACCCTCAAGAGGAGACGGGCTGTG |
| DEDD2_HUMAN/25-110 | TCGCTTCACCGTATGTTCGAGgtgGTGGGCGGGCAACTGACCGAGTGCGAGCTGGAGCTCCTGGCCTTTCTGCTGGAT.........GAG---GCTCCTGGCGCCGCCggaggcTTAGCCCGGGCCCGCAGCGGCCTAGAGCTCCTGCTGGAG...CTGGAGCGCCGCGGGCAGTGCGACGAGAGCAACCTG............CGGCTGCTGGGGCAACTCCTGCGCGTGCTGGCCCGCCACGACCTGCTGCCGCACCTGGCGCGCAAGCGGCGCCGGCCAGTG |
| Q99CX0_BHV4/4-80 | ---AGGGATGTGTTGCTTGCC...ATCGAGACACATCTTAACCAAAATGAAAAAACCTTTGTCATGTATTTTCTTCTG.........GACCCATATATCCCCAAAGAG......TGTGAGGAT---------TTTCTCCCTACTCTAGAAAAT...CTACATAGCAAGAGGAAAATAATA---------TAC............CCCATTTTAATTGAACTGATGTATATATTACAAAGATTTGACTTACTGAGAAGCATCTTCCTATTAGACCACAGATTTGTC |
| Q9J2H2_9GAMA/94-168 | TACAAACACCTGATGCTCTCC...ATTGACCGCCAGCTCTCAGAAAGGGACGTGAAAAATTTAGTTTTTCTAACGGGC.........GACCAGCTTGGTCGCAGGCGC......AACCAGTCA---CCCACCTTTTTTCGGTGGCTCTCGCAA...ATGGAAAAGGCGGCCCTGGTCAGCCCCTCAAACTAC............ATGGTTTTAAGTGACCTGCTGCAGGCCGTCTCCAGGCGCGACGTGGCCAAG------------------------GTCGTG |
| P88961_HHV8/94-170 | TATCAGCTCACTGTTCTCCAC...GTAGACGGGGAGCTGTGTGCGAGGGATATTAGGTCTTTGATATTTTTAAGCAAG.........GACACTATAGGGTCTCGCAGC......ACACCACAG------ACATTCTTACACTGGGTGTACTGT...ATGGAAAACTTAGACCTACTGGGTCCCACTGACGTG............GATGCCCTAATGTCAATGCTTAGATCTTTGTCAAGAGTAGACCTACAGCGC---------------CAAGTGCAAACCCTA |
| CFLA_MCV1/96-181 | TACCGCAAGCTCATGGTTTGC...GTGGGTGAGGAGCTCGACTCGAGCGAGCTACGCGCTCTACGCTTGTTCGCGTGC...aacctgAATCCGAGCCTGAGCACGGCG......CTTTCTGAGAGCAGCCGCTTTGTCGAGCTTGTACTCGCG...CTTGAAAACGTAGGACTCGTCTCGCCATCGAGTGTT............TCCGTGCTTGCGGACATGTTGCGCACTCTTCGGCGCCTCGATTTGTGCCAGCAGCTTGTTGAGTACGAACAACAAGAGCAA |
| O11300_MCV1/94-170 | TACAGGCTTCAAGTTGCTGCC...ATCAACAACATGGTCGGGAGCGAAGACCTACGCGTCATGTGC---CTTTGCGCG.........GGAAAGCTCTTGCCGCCAAGC......TGCACGCCG---CGCTGCCTTGTCGATCTTGTCTCCGCG...CTCGAGGACGTGGGGGCTATCTCTCCGCAGGACGTT............TCTGTCCTGGTGACCCTCCTTCACGCCGTTTGCAGATACGATCTTTCCGTG---------------GCGCTGTCGGCAGTA |
| VG71_SHV21/94-167 | CATGTTTTGACTCTAGTTAAT...GTCAATAACAACTTAACTGCTAAAGACGAAAAGCGCTTGTGTTTTATTCTCGAT.........CAATTCTTTCCCAGAAATGTA......GCTGCCCCA---TCTGTAATTTTATGTGTGTTTTCTAAT...ATGTTATGTGAAATGCATGTGCTA---GAGTGTTTA............TGTCAGCTGAAAAAGTGCCTCAAACAGATAGGGCGAAGTGACCTTGCCAAA------------------------ACTGTT |