EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01327 alignment
(11 sequences with 612 bp)


DEF_MYCPN/30-198 AAAGCATGACTAGTGCTGGACGATGTTAAGGAAATTAACGAACCGACTAAACCAGTTCAGTTTCCC.........---TTAGACCAAGCGAGTCTCGATTGCATTGCCAAAATGATGGCTTACGTTGATGCATCTTACAACGGTGAT...GCTGAGAAGTATGGCATTATTCCCGGCATTGGGATTGCCGCTAACCAAATTGGTTATTGAAAGCAAATGTTCTACATC...CACCTAATGGATGGT...------------GGGGTGGAACACAAG------------..............................------------TGTCTGTTAATTAATCCCAAGATTATCAACTTAAGT---------...---GCCAACAAATCCTTTTTAAAGAGCGGTGAGGGTTGTTTGAGTGTTCCCAAAATGCACCAGGGTTAT...GTTATTCGCCACGAATGGATTACGATCACTGGTTTTGATTGACTCCAACAAAAAGAGATCACCATTACTGCTACTGGTTTATTTGGGATGTGCTTGCAACACGAATTCGATCATTTGCAAGGGCGGTTTTACTACCACCGCATTAATCCGCTAAACCCTTTG
DEF2_BACSU/4-173 ATGGAAAACATCGTACGTGACGGCCATCCAGCCCTCAGAGAGACTGCCGAACCTGTTGAGCTGCCT.........---CCAACTGATGCAGAAAAACAGCAGCTGGCCGACATGATCGAATTTGTTAAAAACAGCCAAAATCCAGAAttaGCCGAAAAATACAAGCTGCGCCCTGGCGTAGGACTCGCAGCTCCTCAAATTAATATCAAAAAACGAATGATCGCCGTT...CATGCGGAAGATGCT...---TCCGGT------AAATTATACAGC------------..............................------------TATGCTCTGTTTAATCCTAAGATCGTCAGCCATTCA---------...---GTTGAAAAAAGCTACTTAACAAGCGGCGAGGGCTGCCTCTCTGTGGATGAAGCGATTCCCGGTTAT...GTTCCCCGCTATGCTCGCATCAGAGTAAAAGGAACAACACTA---GAAGGCGAAAATATTGATATTCGTTTAAAAGGATTTCCGGCTATTGTGTTTCAGCATGAGATCGATCATTTGAACGGCGTTATGTTCTATGATCATATTGATAAGGAAAATCCTTTC
DEF_MYCTU/3-168 GTCGTACCCATCCGCATCGTGGGCGATCCCGTCTTACACACTGCGACCACACCGGTGACGGTCGCCgccgacggtTCACTCCCGGCGGATCTCGCCCAGTTGATCGCCACCATGTACGACACCATGGACGCC---------------...------------------GCCAACGGAGTCGGCCTGGCTGCCAACCAGATCGGCTGCAGCCTGCGGCTCTTCGTCTAC...GATTGCGCCGCG---...GACCGCGCAATGACCGCCCGCCGACGC------------..............................------------GGTGTGGTCATCAATCCGGTGCTTGAGACCTCCGAAATACCTGAGaccATGCCCGACCCGGAC------ACCGACGACGAAGGCTGTCTGTCGGTTCCCGGC---GAGTCATTTCCT...ACCGGACGCGCGAAGTGGGCACGAGTCACCGGACTCGACGCC---GATGGCAGTCCGGTCAGTATCGAGGGCACCGGCCTGTTCGCGCGGATGCTGCAGCACGAAACCGGGCACCTTGATGGATTCCTGTACCTGGACCGCCTCATCGGCCGGTACGCCCGC
DEF_THETH/2-165 GTCTACCCCATCCGGCTTTACGGAGACCCCGTCCTCCGCCGCAAGGCCCGGCCCGTGGAG------.........GACTTCTCG---GGGATTAAGCGCCTGGCGGAGGACATGCTGGAGACGATGTTTGAG---------------...------------------GCCAAAGGGGTGGGGCTTGCCGCCCCCCAGATCGGCCTCTCCCAGCGCCTCTTCGTGGCGgtgGAGTACGCCGACGAGcccGAGGGGGAG------GAGGAGAGGCCCCTGAGGGAGCTC..............................GTGCGCCGGGTCTACGTGGTGGCGAACCCGGTGATCACCTACCGGGAG---------...---GGACTGGTG---------GAGGGGACGGAGGGGTGCCTCTCCCTGCCCGGC---CTCTACTCCGAGgagGTGCCCCGGGCGGAGCGCATCCGGGTGGAGTACCAGGACGAG---GAGGGCCGTGGGCGCGTGTTGGAGCTCGAGGGGTACATGGCCCGGGTCTTCCAGCATGAGATCGACCATCTGGACGGGATCCTCTTCTTTGAGCGCCTGCCCAAGCCCAAGCGGGAG
DEF_THEMA/1-149 ATGTACAGAATAAGAGTCTTTGGAGATCCCGTCTTGAGAAAGAGGGCAAAACCCGTTACA------.........AAGTTCGACGAGAACCTGAAAAAGACCATAGAAAGAATGATAGAGACGATGTATCAC---------------...------------------TACGACGGTGTGGGACTCGCGGCACCGCAGGTTGGAATATCTCAGAGGTTCTTCGTCATG...GACGTTGGAAAT---...---------------------GGTCCG------------..............................------------GTTGCCGTGATAAATCCGGAGATTCTTGAAATCGAT---------...---CCAGAAACTGAA------GTAGCAGAAGAGGGGTGCCTCAGCTTTCCCGAG---ATCTTCGTCGAG...ATAGAAAGGAGCAAAAGAATAAAGGTCAAATACCAGAACACA---AGGGGAGAATACGTGGAAGAAGAACTGGAAGGTTACGCTGCAAGGGTTTTTCAGCACGAGTTCGATCATCTGAACGGAGTTTTGATCATCGATCGAATCAGTCCAGCAAAGCGCCTT
DEF1_CLOAB/3-150 ATACGTAGTATAAGAAAGTATGGGGACGAATTATTAAGAAAAAAAAGTAGAAAAGTAGAA------.........AAGATAGATAAGAGATTATTAACTCTTATAGATGATATGTTTGAAACCATGTATAAT---------------...------------------GCAGATGGAGTAGGTCTTGCAGCTCCACAGGTTGGTATATTAAAAAGACTTGTAGTAATA...GATGTAGGAGAA---...---------------------GGTCCT------------..............................------------GTTGTACTAATAAATCCTGAAATATTAGAGACAAGT---------...---GGAAAAGCT---------GTAGATGTAGAAGGCTGCCTAAGTATTCCAGAA---AGACAAGGAGAA...GTTGAAAGACCAACATATGTTAAGGCAAAAGCTCTAAATGAA---AAAGGAGAAGAAATTGTAATTGAAGCAGAAGATTTATTTGCAAGAGCTATATGCCATGAAACAGATCATTTAAATGGAGTTTTATTTGTAGATAAATTAGCTGAAAGTGAGGGAAAT
DEF1_BACSU/3-152 GTAAAAAAGGTCGTCACACATCCTGCGGAGGTTTTGGAAACACCTGCGGAAACCGTGACT------.........GTTTTTGATAAAAAGCTAAAAAAACTGCTTGATGATATGTACGACACCATGCTTGAA---------------...------------------ATGGATGGTGTCGGACTGGCAGCGCCGCAAATCGGCATTTTAAAAAGAGCGGCCGTCGTA...GAAATCGGGGAT---...GACAGA---------------GGGAGA------------..............................------------ATTGATCTCGTTAATCCTGAAATTTTAGAAAAAAGC---------...---GGCGAGCAA---------ACCGGAATTGAAGGATGCTTGAGCTTTCCTAAC---GTCTATGGTGAT...GTCACACGTGCCGATTATGTCAAAGTGCGTGCGTTTAACCGT---CAGGGAAAACCGTTCATTCTGGAAGCGCGAGGCTTTTTAGCAAGAGCCGTGCAGCATGAAATGGACCACTTAGACGGTGTGCTGTTTACATCTAAAATAAGTAAATACTATACAGAA
DEF_HAEIN/3-153 GCACTTAATGTATTAATTTATCCTGATGATCACTTAAAGGTTGTCTGTGAGCCTGTTACT------.........AAAGTTAATGATGCAATTCGTAAAATTGTTGATGATATGTTTGATACGATGTATCAA---------------...------------------GAGAAAGGTATTGGTTTAGCTGCACCTCAGGTGGATATTTTGCAACGTATTATTACTATT...GATGTTGAAGGC---...GATAAACAG------------AATCAG------------..............................------------TTTGTTTTGATTAACCCTGAAATTTTGGCTTCAGAA---------...---GGCGAAACG---------GGAATTGAAGAGGGGTGTTTATCCATTCCAGGG---TTCCGTGCGTTG...GTTCCTCGTAAAGAAAAAGTGACAGTGAGAGCGTTAGATCGT---GATGGTAAAGAATTTACTTTAGATGCTGATGGTTTGCTTGCGATCTGTATTCAACACGAGATCGATCATCTTAATGGAATTTTATTTGTTGATTACCTTTCTCCACTTAAACGCCAG
DEF_ECOLI/2-152 GTTTTGCAAGTGTTACATATTCCGGACGAGCGGCTTCGCAAAGTTGCTAAACCGGTAGAA------.........GAAGTGAATGCAGAAATTCAGCGTATCGTCGATGATATGTTCGAGACGATGTACGCA---------------...------------------GAAGAAGGTATTGGCCTGGCGGCAACCCAGGTTGATATCCATCAACGTATCATTGTTATT...GATGTTTCGGAA---...AACCGTGAC------------GAACGG------------..............................------------CTAGTGTTAATCAATCCAGAGCTTTTAGAAAAAAGC---------...---GGCGAAACA---------GGCATTGAAGAAGGTTGCCTGTCGATCCCTGAA---CAACGTGCTTTA...GTGCCGCGCGCAGAGAAAGTTAAAATTCGCGCCCTTGACCGC---GACGGTAAACCATTTGAACTGGAAGCAGACGGTCTGTTAGCCATCTGTATTCAGCATGAGATGGATCACCTGGTCGGCAAACTGTTTATGGATTATCTGTCACCGCTGAAACAACAA
DEF_SYNY3/16-169 CCTTTAGAACTTCATTACCTAGGGGACAAGGTGCTCCGACAACCGGCCAAGCGCATTGCC------.........AAGGTGGATGACAGCATTCGCAAATTGGCCAAGGAGATGTTGCAGACTATGTACAGT---------------...------------------GCCAATGGTATCGGGTTGGCTGCTCCCCAGGTGGGTATTAACAAACAACTTTTGGTGGTG...GATTGTGAACAG---...GATAAGCCC------GATGAACCGCCT------------..............................------------TTGATTATGATTAATCCCCAAATTACCCGCACTAGC---------...---GAAGAACTTTGT------GTGGTGGAAGAGGGTTGTCTGAGTGTGCCCAAT---GTTTACATGGAT...GTGACCCGGCCCCGGGCGATCGAAGTGACCTACAAAGATGAG---CATGGCCGGCCCCAAAAACGCCTTTTTGCTGAGCTAACCGCCAGGGTAATTCAACATGAAATGGACCATCTGAATGGGGTTATGTTTGTGGACCGGGTGGATAATCCTTTAGCCTTA
DEF_FREDI/16-169 CCCTTGCAACTTCACTATTTAGGCGATCGCGTTCTTCGTCAACCAGCAAAGCGCATTGCC------.........AAAGTAGATGATGAACTGCGCCAACTCATCCGGGATATGCTGCAAACTATGTACAGC---------------...------------------AAAGATGGCATTGGTTTGGCTGCACCCCAAGTTGGTATTCATAAACAACTAATTGTCATC...GATTTAGAGCCA---...GATAATCCT------GCTAATCCGCCA------------..............................------------TTAGTATTGATTAACCCCACCATTAAACAAGTAAGC---------...---AAAGAAATCTGC------GTTGCTCAAGAAGGCTGTTTGAGCATTCCTAAC---GTGTATATGGAT...GTCAAGCGTCCAGAAGTGGTGGAAATTGCTTATAAAGATGAA---AATGGTCGTCCTAAGACATTAAAAGCTACTGACTTACTCGCACGCTGCATTCAGCACGAAATGGATCACCTCAATGGCGTGGTGTTCGTAGATCGTGTAGATAATTCCTTGACTTTG