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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01327 alignment
(14 sequences with 204 aa)


DEF_MYCPN/30-198 KAWLVLDDVKEINEPTKPVQFP...-LDQASLDCIAKMMAYVDASYNGD.AEKYGIIPGIGIAANQIGYWKQMFYI.HLMDG.----GVEHK----..........----CLLINPKIINLS---.-ANKSFLKSGEGCLSVPKMHQGY.VIRHEWITITGFDWLQQKEITITATGLFGMCLQHEFDHLQGRFYYHRINPLNPL
DEF_MYCGE/30-198 KTWLVFDDNALINKPTEAVNFP...-IDEQIETCIKKMIAYVDASYDGK.AQEYDIIPGIGIAANQIGYWKQLFYI.HLNDL.----NKEKK----..........----CLLINPKIIDQS---.-ENKAFLESGEGCLSVKKQHKGY.VIRSEWITIKGYDWFEKKEITIKATGLFGMCLQHEFDHLQGRFFYQRINPLNPW
DEF2_BACSU/4-173 MENIVRDGHPALRETAEPVELP...-PTDAEKQQLADMIEFVKNSQNPElAEKYKLRPGVGLAAPQINIKKRMIAV.HAEDA.-SG--KLYS----..........----YALFNPKIVSHS---.-VEKSYLTSGEGCLSVDEAIPGY.VPRYARIRVKGTTL-EGENIDIRLKGFPAIVFQHEIDHLNGVMFYDHIDKENPF
DEF2_BACST/4-173 MKDIIKEGHPTLRKVAEPVPLP...-PSEEDKRILQSLLDYVKMSQDPElAAKYGLRPGIGLAAPQINVSKRMIAV.HVTDE.-NG--TLYS----..........----YALFNPKIVSHS---.-VQQCYLTTGEGCLSVDRDVPGY.VLRYARITVTGTTL-DGEEVTLRLKGLPAIVFQHEIDHLNGIMFYDRINPADPF
DEF_LACLA/4-186 MDDIIREGYPTLREVANDVTLP...-LSDEDIILGEKMLQFLHNSQDPVmAEKMGLRGGVGLAANQLGLLKKVIAV.LIPN-.-------EPEVDEdgneippkeaYKMREIMYNAKVVSHS---.-VQDAAVEGGEGCLSVDREVPGY.VVRHARVTVEYYNK-EGEKKKIRLKDFPAICVQHEIDHTNGVMFYDHINMNDPW
DEF_MYCTU/3-168 VVPIRIVGDPVLHTATTPVTVAadgSLPADLAQLIATMYDTMDA-----.------ANGVGLAANQIGCSLRLFVY.DCAA-.DRAMTARRR----..........----GVVINPVLETSEIPEtMPDPD--TDDEGCLSVPG-ESFP.TGRAKWARVTGLDA-DGSPVSIEGTGLFARMLQHETGHLDGFLYLDRLIGRYAR
DEF_THETH/2-165 VYPIRLYGDPVLRRKARPVE--...DFS-GIKRLAEDMLETMFE-----.------AKGVGLAAPQIGLSQRLFVAvEYADEpEGE--EERPLREL..........VRRVYVVANPVITYRE---.-GLV---EGTEGCLSLPG-LYSEeVPRAERIRVEYQDE-EGRGRVLELEGYMARVFQHEIDHLDGILFFERLPKPKRE
DEF_THEMA/1-149 MYRIRVFGDPVLRKRAKPVT--...KFDENLKKTIERMIETMYH-----.------YDGVGLAAPQVGISQRFFVM.DVGN-.-------GP----..........----VAVINPEILEID---.-PETE--VAEEGCLSFPE-IFVE.IERSKRIKVKYQNT-RGEYVEEELEGYAARVFQHEFDHLNGVLIIDRISPAKRL
DEF1_CLOAB/3-150 IRSIRKYGDELLRKKSRKVE--...KIDKRLLTLIDDMFETMYN-----.------ADGVGLAAPQVGILKRLVVI.DVGE-.-------GP----..........----VVLINPEILETS---.-GKA---VDVEGCLSIPE-RQGE.VERPTYVKAKALNE-KGEEIVIEAEDLFARAICHETDHLNGVLFVDKLAESEGN
DEF1_BACSU/3-152 VKKVVTHPAEVLETPAETVT--...VFDKKLKKLLDDMYDTMLE-----.------MDGVGLAAPQIGILKRAAVV.EIGD-.DR-----GR----..........----IDLVNPEILEKS---.-GEQ---TGIEGCLSFPN-VYGD.VTRADYVKVRAFNR-QGKPFILEARGFLARAVQHEMDHLDGVLFTSKISKYYTE
DEF_HAEIN/3-153 ALNVLIYPDDHLKVVCEPVT--...KVNDAIRKIVDDMFDTMYQ-----.------EKGIGLAAPQVDILQRIITI.DVEG-.DKQ----NQ----..........----FVLINPEILASE---.-GET---GIEEGCLSIPG-FRAL.VPRKEKVTVRALDR-DGKEFTLDADGLLAICIQHEIDHLNGILFVDYLSPLKRQ
DEF_ECOLI/2-152 VLQVLHIPDERLRKVAKPVE--...EVNAEIQRIVDDMFETMYA-----.------EEGIGLAATQVDIHQRIIVI.DVSE-.NRD----ER----..........----LVLINPELLEKS---.-GET---GIEEGCLSIPE-QRAL.VPRAEKVKIRALDR-DGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQ
DEF_SYNY3/16-169 PLELHYLGDKVLRQPAKRIA--...KVDDSIRKLAKEMLQTMYS-----.------ANGIGLAAPQVGINKQLLVV.DCEQ-.DKP--DEPP----..........----LIMINPQITRTS---.-EELC--VVEEGCLSVPN-VYMD.VTRPRAIEVTYKDE-HGRPQKRLFAELTARVIQHEMDHLNGVMFVDRVDNPLAL
DEF_FREDI/16-169 PLQLHYLGDRVLRQPAKRIA--...KVDDELRQLIRDMLQTMYS-----.------KDGIGLAAPQVGIHKQLIVI.DLEP-.DNP--ANPP----..........----LVLINPTIKQVS---.-KEIC--VAQEGCLSIPN-VYMD.VKRPEVVEIAYKDE-NGRPKTLKATDLLARCIQHEMDHLNGVVFVDRVDNSLTL