EMBL-EBI
>
Goldman Group
PANDIT Home
|
Browse PANDIT
|
Help on PANDIT
|
Release notes
|
Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF01311 - Bac_export_1)
Bacterial export proteins, family 1
(
Pfam
reference: accession no.
PF01311
)
(
Interpro
reference: accession no.
IPR002010
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
16 sequences @ 257 aa
(ave. pairwise identity: 0.23)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 15.48)
nucleotides
(available for above)
16 sequences @ 771 bp
(ave. pairwise identity: 0.38)
New Hampshire format
(total tree length: 9.30)
amino acids, restricted set
(corresp. to available nt seqs)
16 sequences @ 257 aa
(ave. pairwise identity: 0.23)
New Hampshire format
(total tree length: 15.48)