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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01262 phylogeny
for restricted amino acid alignment


 
((((((((((((((Q74AR0_GEOSL/147-301,Q82Y65_NITEU/163-317),((((((Q9RLB2_RHILE/149-303,(Q89QE9_BRAJA/149-303,Q9A2I7_CAUCR/149-303)),Q6SH06_9BACT/149-303),((Q6A5I3_PROAC/149-303,((Q8RME8_AMYMD/149-303,(Q6AEY9_LEIXX/149-303,(Q9S227_STRCO/149-303,Q6JE92_RHOOP/149-303))),Q7TXW2_MYCBO/17-171)),(O85595_9GAMM/149-303,(Q87QP6_VIBPA/149-303,Q6LT05_PHOPR/149-303)))),(Q83CJ9_COXBU/148-302,Q7NWG7_CHRVO/149-303)),Q6MB39_PARUW/148-302),(((Q72EK7_DESVH/149-303,Q6AQV0_DESPS/149-303),(Q7UXF1_RHOBA/149-303,Q8A7H0_BACTN/149-303)),(Q7X4S6_THECA/147-301,Q9RT70_DEIRA/169-323)))),((((Q6KIJ0_MYCMO/146-310,Q6G9C3_STAAS/146-304),Q6MUG7_MYCMS/156-309),((Q6LX40_METMP/149-304,((Q9K827_BACHD/148-303,((DHA_BACST/149-303,DHA_BACSH/149-304),DHA_OCEIH/148-303)),((Q8Y6V2_LISMO/148-303,DHA2_STAAW/148-303),DHA_BACSU/147-302))),(Q8RD85_THETN/149-304,Q9AIK2_BILWA/148-309))),(Q6MKC3_BDEBA/149-303,O68519_MYXXA/150-304))),((Q8DH53_SYNEL/151-305,Q8YUJ1_ANASP/149-303),(P72775_SYNY3/148-302,Q7NEB1_GLOVI/148-302))),Q9ZJ86_HELPJ/152-306),Q8KEI3_CHLTE/160-314),(Q8KEN6_CHLTE/152-306,Q72IQ0_THET2/151-298)),Q7VA67_PROMA/157-311),((((Q7V0V5_PROMP/150-321,Q7VB57_PROMA/150-321),Q7V6J3_PROMM/150-321),(((Q6F836_ACIAD/145-322,(Q8FV74_BRUSU/148-320,Q9A399_CAUCR/149-322)),((((((Q7U2Q3_MYCBO/151-319,Q72GR8_THET2/148-316),Q83AE6_COXBU/148-316),(Q6ACH0_LEIXX/148-319,Q8G5Z4_BIFLO/156-328)),(Q72W91_LEPIC/146-317,(Q8DL05_SYNEL/148-318,Q8YRN4_ANASP/175-345))),(PNTAA_RICPR/152-322,Q7UIW1_RHOBA/149-319)),(((Q82W39_NITEU/148-322,Q7P1W1_CHRVO/147-320),(Q8XVU7_RALSO/145-320,Q8XRA9_RALSO/145-325)),PNTAA_RHORU/153-325))),((Q07600_EIMTE/644-821,(Q8IKU3_PLAF7/790-967,Q7RC77_PLAYO/820-992)),((((Q8EAZ7_SHEON/144-316,(Q83RD0_SHIFL/151-322,(Q87HP1_VIBPA/152-323,Q7VL24_HAEDU/146-317))),Q24858_ENTHI/711-882),(Q7RV12_NEUCR/210-380,(P73496_SYNY3/167-337,((Q18031_CAEEL/174-344,Q6NYQ7_BRARE/204-374),Q9ATP8_ACEAT/222-392)))),((Q9F3D4_STRCO/154-324,Q6AA35_PROAC/185-358),Q8UCJ1_AGRT5/148-322))))),Q819Z5_BACCR/143-269)),Q6LHE7_PHOPR/159-315),((LYS1_EMENI/175-327,(LYS1_NEUCR/172-321,((LYS1_YARLI/175-323,(Q6BUY2_DEBHA/177-325,LYS1_CANAL/187-335)),(LYS1_CANGA/174-322,LYS1_YEAST/175-323)))),LYS1_SCHPO/175-324)),((O44503_CAEEL/203-410,Q6NP53_DROME/239-448),AASS_MOUSE/197-405)),O04709_MAIZE/196-401),O04884_ARATH/194-400,Q8GRT6_GOSHI/184-385);
((((((((((((((Q74AR0_GEOSL/147-301:0.55139,Q82Y65_NITEU/163-317:0.19602):0.13581,((((((Q9RLB2_RHILE/149-303:0.12703,(Q89QE9_BRAJA/149-303:0.11396,Q9A2I7_CAUCR/149-303:0.23189):0.09167):0.07090,Q6SH06_9BACT/149-303:0.22013):0.05993,((Q6A5I3_PROAC/149-303:0.40529,((Q8RME8_AMYMD/149-303:0.13873,(Q6AEY9_LEIXX/149-303:0.28829,(Q9S227_STRCO/149-303:0.22522,Q6JE92_RHOOP/149-303:0.23360):0.04504):0.05088):0.05681,Q7TXW2_MYCBO/17-171:0.26747):0.05790):0.17697,(O85595_9GAMM/149-303:0.16001,(Q87QP6_VIBPA/149-303:0.07504,Q6LT05_PHOPR/149-303:0.18197):0.07784):0.10329):0.04120):0.03296,(Q83CJ9_COXBU/148-302:0.31751,Q7NWG7_CHRVO/149-303:0.13070):0.09727):0.01332,Q6MB39_PARUW/148-302:0.33401):0.04815,(((Q72EK7_DESVH/149-303:0.24224,Q6AQV0_DESPS/149-303:0.26449):0.09059,(Q7UXF1_RHOBA/149-303:0.26946,Q8A7H0_BACTN/149-303:0.28404):0.03722):0.05487,(Q7X4S6_THECA/147-301:0.13928,Q9RT70_DEIRA/169-323:0.26106):0.09346):0.05243):0.05051):0.03937,((((Q6KIJ0_MYCMO/146-310:0.63350,Q6G9C3_STAAS/146-304:0.40181):0.08002,Q6MUG7_MYCMS/156-309:0.47412):0.16513,((Q6LX40_METMP/149-304:0.14748,((Q9K827_BACHD/148-303:0.11409,((DHA_BACST/149-303:0.12467,DHA_BACSH/149-304:0.14118):0.03630,DHA_OCEIH/148-303:0.17632):0.05398):0.03208,((Q8Y6V2_LISMO/148-303:0.16642,DHA2_STAAW/148-303:0.17596):0.06512,DHA_BACSU/147-302:0.14093):0.01727):0.09283):0.05273,(Q8RD85_THETN/149-304:0.13089,Q9AIK2_BILWA/148-309:0.44386):0.07900):0.04396):0.04442,(Q6MKC3_BDEBA/149-303:0.19482,O68519_MYXXA/150-304:0.26429):0.11132):0.08064):0.07074,((Q8DH53_SYNEL/151-305:0.24312,Q8YUJ1_ANASP/149-303:0.09488):0.04206,(P72775_SYNY3/148-302:0.27655,Q7NEB1_GLOVI/148-302:0.13661):0.05813):0.10810):0.07310,Q9ZJ86_HELPJ/152-306:0.88415):0.05478,Q8KEI3_CHLTE/160-314:0.35928):0.07847,(Q8KEN6_CHLTE/152-306:0.56856,Q72IQ0_THET2/151-298:0.83039):0.13052):0.12434,Q7VA67_PROMA/157-311:0.33361):0.17119,((((Q7V0V5_PROMP/150-321:0.22611,Q7VB57_PROMA/150-321:0.08528):0.05617,Q7V6J3_PROMM/150-321:0.11665):0.17653,(((Q6F836_ACIAD/145-322:0.41152,(Q8FV74_BRUSU/148-320:0.12983,Q9A399_CAUCR/149-322:0.11797):0.13889):0.06325,((((((Q7U2Q3_MYCBO/151-319:0.34651,Q72GR8_THET2/148-316:0.27269):0.06563,Q83AE6_COXBU/148-316:0.28796):0.05740,(Q6ACH0_LEIXX/148-319:0.49731,Q8G5Z4_BIFLO/156-328:0.36834):0.16920):0.08956,(Q72W91_LEPIC/146-317:0.32432,(Q8DL05_SYNEL/148-318:0.09251,Q8YRN4_ANASP/175-345:0.14354):0.11501):0.09199):0.08696,(PNTAA_RICPR/152-322:0.38066,Q7UIW1_RHOBA/149-319:0.43481):0.09198):0.05305,(((Q82W39_NITEU/148-322:0.10415,Q7P1W1_CHRVO/147-320:0.27290):0.04391,(Q8XVU7_RALSO/145-320:0.14704,Q8XRA9_RALSO/145-325:0.24311):0.08020):0.12237,PNTAA_RHORU/153-325:0.24172):0.05671):0.04327):0.04021,((Q07600_EIMTE/644-821:0.30054,(Q8IKU3_PLAF7/790-967:0.00988,Q7RC77_PLAYO/820-992:0.22355):0.40096):0.37462,((((Q8EAZ7_SHEON/144-316:0.13487,(Q83RD0_SHIFL/151-322:0.08604,(Q87HP1_VIBPA/152-323:0.11482,Q7VL24_HAEDU/146-317:0.14365):0.05827):0.02852):0.08722,Q24858_ENTHI/711-882:0.50858):0.02606,(Q7RV12_NEUCR/210-380:0.23477,(P73496_SYNY3/167-337:0.12080,((Q18031_CAEEL/174-344:0.12310,Q6NYQ7_BRARE/204-374:0.16083):0.08475,Q9ATP8_ACEAT/222-392:0.16919):0.05541):0.01823):0.03149):0.04501,((Q9F3D4_STRCO/154-324:0.29805,Q6AA35_PROAC/185-358:0.24883):0.10229,Q8UCJ1_AGRT5/148-322:0.30186):0.07787):0.12265):0.12498):0.15156):0.49333,Q819Z5_BACCR/143-269:1.32585):0.38682):0.29296,Q6LHE7_PHOPR/159-315:1.75910):0.52253,((LYS1_EMENI/175-327:0.24537,(LYS1_NEUCR/172-321:0.26673,((LYS1_YARLI/175-323:0.16691,(Q6BUY2_DEBHA/177-325:0.13928,LYS1_CANAL/187-335:0.14045):0.14343):0.04297,(LYS1_CANGA/174-322:0.07695,LYS1_YEAST/175-323:0.17918):0.12661):0.14490):0.06908):0.13766,LYS1_SCHPO/175-324:0.20807):2.23712):1.31657,((O44503_CAEEL/203-410:0.29538,Q6NP53_DROME/239-448:0.22892):0.11547,AASS_MOUSE/197-405:0.26653):0.49794):0.25992,O04709_MAIZE/196-401:0.17215):0.12604,O04884_ARATH/194-400:0.14169,Q8GRT6_GOSHI/184-385:0.17647);