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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01248 phylogeny
for restricted amino acid alignment


 
(((((((((((((RS12_DROME/23-118,RS12_CAEEL/24-119),RS12_CYAPA/21-116),(RS12_HUMAN/15-110,((RS12A_SCHPO/31-126,RS12_ERYGR/16-111),RS12_YEAST/26-123))),RS12_PLAFA/23-119),(RS12C_ARATH/29-124,RS12_HORVU/28-123)),(O76223_9TRYP/29-124,RS12_TRYBB/30-125)),(GA45B_HUMAN/21-121,GA45A_HUMAN/21-123)),(((SEBP2_RAT/650-752,O77331_PLAF7/495-595),(((((RL30E_PYRHO/1-95,RL30E_THECE/2-96),((RL30E_METJA/7-101,RL30E_METVA/7-101),RL30E_METTH/1-95)),RL30E_SULAC/3-97),RL30E_AERPE/3-97),((((RL30_MAIZE/12-106,(Q9XWS4_CAEEL/12-106,Q9VJ19_DROME/12-106)),RL30_TRYBB/10-104),(RL30_KLULA/7-101,RL30B_SCHPO/22-116)),Q9XG43_GUITH/11-105))),(YLXQ_BACSU/4-96,Q9WZN2_THEMA/7-99))),(RL7A_METJA/15-106,((RL7A_ARCFU/13-107,RL7A_HALMA/14-104),RL7A_AERPE/17-111))),((((RL7A_CHICK/121-215,RL7A_ANOGA/128-222),Q9W3Z2_DROME/127-221),((RL8B_YEAST/116-211,RL8_SCHPO/116-211),RL7A_ARATH/112-207)),RP38_HUMAN/99-190)),(NHP2_SCHPO/39-133,(Q9V3U2_DROME/51-146,Q9XXD4_CAEEL/53-148))),NHPX_DROME/19-113),Q9SU26_ARATH/20-114,NHPX_YEAST/18-112);
(((((((((((((RS12_DROME/23-118:0.28854,RS12_CAEEL/24-119:0.29664):0.01820,RS12_CYAPA/21-116:0.25779):0.04518,(RS12_HUMAN/15-110:0.11173,((RS12A_SCHPO/31-126:0.14106,RS12_ERYGR/16-111:0.19286):0.02817,RS12_YEAST/26-123:0.34648):0.11882):0.01874):0.10253,RS12_PLAFA/23-119:0.60254):0.05383,(RS12C_ARATH/29-124:0.22209,RS12_HORVU/28-123:0.08501):0.17736):0.20518,(O76223_9TRYP/29-124:0.44324,RS12_TRYBB/30-125:0.17125):0.37641):0.47594,(GA45B_HUMAN/21-121:0.33627,GA45A_HUMAN/21-123:0.35280):0.83621):0.66620,(((SEBP2_RAT/650-752:0.62381,O77331_PLAF7/495-595:0.95852):0.36634,(((((RL30E_PYRHO/1-95:0.13538,RL30E_THECE/2-96:0.21893):0.22304,((RL30E_METJA/7-101:0.22930,RL30E_METVA/7-101:0.23741):0.15730,RL30E_METTH/1-95:0.06994):0.27515):0.12139,RL30E_SULAC/3-97:0.49992):0.23507,RL30E_AERPE/3-97:0.62678):0.30125,((((RL30_MAIZE/12-106:0.18188,(Q9XWS4_CAEEL/12-106:0.15788,Q9VJ19_DROME/12-106:0.13578):0.07284):0.04851,RL30_TRYBB/10-104:0.28044):0.06854,(RL30_KLULA/7-101:0.28165,RL30B_SCHPO/22-116:0.08301):0.07907):0.08279,Q9XG43_GUITH/11-105:0.59047):0.12538):0.93278):0.19961,(YLXQ_BACSU/4-96:0.75882,Q9WZN2_THEMA/7-99:0.88311):0.45438):0.36611):0.12217,(RL7A_METJA/15-106:0.19598,((RL7A_ARCFU/13-107:0.17908,RL7A_HALMA/14-104:0.44712):0.14654,RL7A_AERPE/17-111:0.16065):0.10402):0.18736):0.09137,((((RL7A_CHICK/121-215:0.15939,RL7A_ANOGA/128-222:0.19911):0.09433,Q9W3Z2_DROME/127-221:0.19347):0.02525,((RL8B_YEAST/116-211:0.10979,RL8_SCHPO/116-211:0.13523):0.23710,RL7A_ARATH/112-207:0.17356):0.15206):0.79081,RP38_HUMAN/99-190:1.19217):0.37274):0.21780,(NHP2_SCHPO/39-133:0.44170,(Q9V3U2_DROME/51-146:0.40345,Q9XXD4_CAEEL/53-148:0.35098):0.24839):0.30515):0.51201,NHPX_DROME/19-113:0.11719):0.10789,Q9SU26_ARATH/20-114:0.09173,NHPX_YEAST/18-112:0.16828);